Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm45071-201ENSMUST00000205353 571 ntBASIC0.11□□□□□ -2.39
HttP42859 AC151907.1-201ENSMUST00000228812 412 ntBASIC0.11□□□□□ -2.39
HttP42859 Gm11845-201ENSMUST00000117886 327 ntBASIC0.11□□□□□ -2.39
HttP42859 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
HttP42859 Gm24221-201ENSMUST00000158833 313 ntBASIC0.11□□□□□ -2.39
HttP42859 Gm28579-201ENSMUST00000186143 369 ntBASIC0.11□□□□□ -2.39
HttP42859 AC165437.1-201ENSMUST00000228640 536 ntBASIC0.11□□□□□ -2.39
HttP42859 Mir382-201ENSMUST00000083494 76 ntBASIC0.11□□□□□ -2.39
HttP42859 Gm12771-201ENSMUST00000120246 135 ntBASIC0.1□□□□□ -2.39
HttP42859 Gm22957-201ENSMUST00000122511 123 ntBASIC0.1□□□□□ -2.39
HttP42859 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC0.1□□□□□ -2.39
HttP42859 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
HttP42859 AC124356.2-201ENSMUST00000221874 336 ntBASIC0.1□□□□□ -2.39
HttP42859 AC158392.1-201ENSMUST00000223720 1069 ntBASIC0.1□□□□□ -2.39
HttP42859 Gm25128-201ENSMUST00000083339 76 ntBASIC0.1□□□□□ -2.39
HttP42859 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
HttP42859 Gm13356-201ENSMUST00000121678 335 ntBASIC0.1□□□□□ -2.39
HttP42859 Gm43493-201ENSMUST00000199837 202 ntBASIC0.1□□□□□ -2.39
HttP42859 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC0.1□□□□□ -2.39
HttP42859 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
HttP42859 Mir411-201ENSMUST00000083543 82 ntBASIC0.1□□□□□ -2.39
HttP42859 Gm22483-201ENSMUST00000157986 274 ntBASIC0.09□□□□□ -2.39
HttP42859 Gm26484-201ENSMUST00000158018 106 ntBASIC0.09□□□□□ -2.39
HttP42859 Gm17052-201ENSMUST00000165496 289 ntBASIC0.09□□□□□ -2.39
HttP42859 Gm46194-201ENSMUST00000218136 320 ntBASIC0.09□□□□□ -2.39
HttP42859 CT485612.2-201ENSMUST00000223014 151 ntBASIC0.09□□□□□ -2.39
HttP42859 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.09□□□□□ -2.39
HttP42859 Gm22158-201ENSMUST00000158411 126 ntBASIC0.09□□□□□ -2.4
HttP42859 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
HttP42859 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.09□□□□□ -2.4
HttP42859 Gm24141-201ENSMUST00000122776 115 ntBASIC0.09□□□□□ -2.4
HttP42859 Gm26149-201ENSMUST00000157432 108 ntBASIC0.09□□□□□ -2.4
HttP42859 AC131068.1-201ENSMUST00000226891 482 ntBASIC0.09□□□□□ -2.4
HttP42859 Gm24319-201ENSMUST00000083389 107 ntBASIC0.09□□□□□ -2.4
HttP42859 Mir103-1-201ENSMUST00000083619 86 ntBASIC0.09□□□□□ -2.4
HttP42859 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
HttP42859 Gm16431-201ENSMUST00000117454 431 ntBASIC0.08□□□□□ -2.4
HttP42859 Gm5731-201ENSMUST00000190969 481 ntBASIC0.08□□□□□ -2.4
HttP42859 Gm43096-201ENSMUST00000196173 421 ntBASIC0.08□□□□□ -2.4
HttP42859 Gm19599-201ENSMUST00000218898 358 ntBASIC0.08□□□□□ -2.4
HttP42859 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.08□□□□□ -2.4
HttP42859 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC0.08□□□□□ -2.4
HttP42859 Gm10360-201ENSMUST00000097219 272 ntBASIC0.08□□□□□ -2.4
HttP42859 Gm43498-201ENSMUST00000202002 1486 ntBASIC0.08□□□□□ -2.4
HttP42859 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
HttP42859 Gm23203-201ENSMUST00000104374 107 ntBASIC0.08□□□□□ -2.4
HttP42859 Gm12806-201ENSMUST00000119384 268 ntBASIC0.08□□□□□ -2.4
HttP42859 Gm14269-201ENSMUST00000120455 306 ntBASIC0.08□□□□□ -2.4
HttP42859 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC0.08□□□□□ -2.4
HttP42859 Gm22561-201ENSMUST00000157331 84 ntBASIC0.08□□□□□ -2.4
HttP42859 Mir669m-1-201ENSMUST00000158945 98 ntBASIC0.08□□□□□ -2.4
HttP42859 Snord91a-201ENSMUST00000104305 93 ntBASIC0.07□□□□□ -2.4
HttP42859 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC0.07□□□□□ -2.4
HttP42859 Gm26352-201ENSMUST00000158223 125 ntBASIC0.07□□□□□ -2.4
HttP42859 Gm27762-201ENSMUST00000183417 109 ntBASIC0.07□□□□□ -2.4
HttP42859 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
HttP42859 Gm45673-201ENSMUST00000210293 358 ntBASIC0.07□□□□□ -2.4
HttP42859 Gm16331-201ENSMUST00000144274 498 ntBASIC0.07□□□□□ -2.4
HttP42859 Mir6364-201ENSMUST00000183396 86 ntBASIC0.07□□□□□ -2.4
HttP42859 Mir6341-201ENSMUST00000183490 121 ntBASIC0.07□□□□□ -2.4
HttP42859 Mir6376-201ENSMUST00000185149 131 ntBASIC0.07□□□□□ -2.4
HttP42859 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC0.07□□□□□ -2.4
HttP42859 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC0.07□□□□□ -2.4
HttP42859 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC0.07□□□□□ -2.4
HttP42859 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.07□□□□□ -2.4
HttP42859 Mir1949-201ENSMUST00000157434 141 ntBASIC0.07□□□□□ -2.4
HttP42859 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
HttP42859 Gm43706-201ENSMUST00000198767 2652 ntBASIC0.06□□□□□ -2.4
HttP42859 Gm18397-201ENSMUST00000176704 587 ntBASIC0.06□□□□□ -2.4
HttP42859 AC165293.1-201ENSMUST00000219669 329 ntBASIC0.06□□□□□ -2.4
HttP42859 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
HttP42859 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC0.06□□□□□ -2.4
HttP42859 Gm11410-201ENSMUST00000120053 1143 ntBASIC0.06□□□□□ -2.4
HttP42859 Gm5329-201ENSMUST00000186898 463 ntBASIC0.06□□□□□ -2.4
HttP42859 Gm44469-201ENSMUST00000198558 79 ntBASIC0.06□□□□□ -2.4
HttP42859 AC154730.1-201ENSMUST00000227874 816 ntBASIC0.06□□□□□ -2.4
HttP42859 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
HttP42859 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
HttP42859 Zfp640-202ENSMUST00000224116 1562 ntBASIC0.06□□□□□ -2.4
HttP42859 Gm23907-201ENSMUST00000104595 189 ntBASIC0.05□□□□□ -2.4
HttP42859 Gm14918-201ENSMUST00000118153 268 ntBASIC0.05□□□□□ -2.4
HttP42859 Gm14907-201ENSMUST00000121948 854 ntBASIC0.05□□□□□ -2.4
HttP42859 Gm23053-201ENSMUST00000175136 96 ntBASIC0.05□□□□□ -2.4
HttP42859 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
HttP42859 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
HttP42859 n-R5s37-201ENSMUST00000082533 118 ntBASIC0.05□□□□□ -2.4
HttP42859 Gm12137-201ENSMUST00000119565 346 ntBASIC0.05□□□□□ -2.4
HttP42859 Gm14651-201ENSMUST00000147192 442 ntBASIC0.05□□□□□ -2.4
HttP42859 Gm22983-201ENSMUST00000158308 104 ntBASIC0.05□□□□□ -2.4
HttP42859 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC0.05□□□□□ -2.4
HttP42859 Mir6365-201ENSMUST00000183990 101 ntBASIC0.05□□□□□ -2.4
HttP42859 Gm26338-201ENSMUST00000102372 110 ntBASIC0.04□□□□□ -2.4
HttP42859 Gm23588-201ENSMUST00000157659 99 ntBASIC0.04□□□□□ -2.4
HttP42859 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC0.04□□□□□ -2.4
HttP42859 Gm18645-201ENSMUST00000209593 651 ntBASIC0.04□□□□□ -2.4
HttP42859 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC0.04□□□□□ -2.4
HttP42859 Gm25333-201ENSMUST00000158035 246 ntBASIC0.04□□□□□ -2.4
HttP42859 Mir3057-201ENSMUST00000175040 91 ntBASIC0.04□□□□□ -2.4
HttP42859 Gm26968-201ENSMUST00000182894 481 ntBASIC0.04□□□□□ -2.4
HttP42859 Gm44472-201ENSMUST00000204922 943 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms