Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Mir7232-201ENSMUST00000197929 74 ntBASIC2.6□□□□□ -1.99
Traf1P39428 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC2.6□□□□□ -1.99
Traf1P39428 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC2.6□□□□□ -1.99
Traf1P39428 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC2.6□□□□□ -1.99
Traf1P39428 Gm22577-201ENSMUST00000083731 109 ntBASIC2.6□□□□□ -1.99
Traf1P39428 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Traf1P39428 Gm14390-201ENSMUST00000117505 1695 ntBASIC2.6□□□□□ -1.99
Traf1P39428 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Traf1P39428 Mdga2-203ENSMUST00000113942 423 ntBASIC2.59□□□□□ -1.99
Traf1P39428 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC2.59□□□□□ -1.99
Traf1P39428 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC2.59□□□□□ -1.99
Traf1P39428 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC2.59□□□□□ -1.99
Traf1P39428 Gm25392-201ENSMUST00000157335 297 ntBASIC2.59□□□□□ -1.99
Traf1P39428 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
Traf1P39428 Mir7215-201ENSMUST00000200383 51 ntBASIC2.59□□□□□ -1.99
Traf1P39428 Gm7039-201ENSMUST00000205138 346 ntBASIC2.59□□□□□ -1.99
Traf1P39428 Gm23097-201ENSMUST00000083448 105 ntBASIC2.59□□□□□ -1.99
Traf1P39428 Mir669d-201ENSMUST00000104644 121 ntBASIC2.58□□□□□ -2
Traf1P39428 Gm13728-201ENSMUST00000117471 400 ntBASIC2.58□□□□□ -2
Traf1P39428 Gm12941-201ENSMUST00000117934 220 ntBASIC2.58□□□□□ -2
Traf1P39428 Gm22535-201ENSMUST00000158174 119 ntBASIC2.58□□□□□ -2
Traf1P39428 Gm25162-201ENSMUST00000158906 159 ntBASIC2.58□□□□□ -2
Traf1P39428 Gm7925-201ENSMUST00000166690 401 ntBASIC2.58□□□□□ -2
Traf1P39428 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.58□□□□□ -2
Traf1P39428 Gm23523-201ENSMUST00000180190 107 ntBASIC2.58□□□□□ -2
Traf1P39428 Gm27313-201ENSMUST00000183500 142 ntBASIC2.58□□□□□ -2
Traf1P39428 Gm9402-201ENSMUST00000196849 388 ntBASIC2.58□□□□□ -2
Traf1P39428 Gm44083-201ENSMUST00000203114 337 ntBASIC2.58□□□□□ -2
Traf1P39428 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Traf1P39428 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.58□□□□□ -2
Traf1P39428 AC164304.1-201ENSMUST00000226920 272 ntBASIC2.58□□□□□ -2
Traf1P39428 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Traf1P39428 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Traf1P39428 Gm22750-201ENSMUST00000102076 103 ntBASIC2.57□□□□□ -2
Traf1P39428 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.57□□□□□ -2
Traf1P39428 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC2.57□□□□□ -2
Traf1P39428 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.57□□□□□ -2
Traf1P39428 Gm26280-201ENSMUST00000157096 101 ntBASIC2.57□□□□□ -2
Traf1P39428 Gm24900-201ENSMUST00000158128 134 ntBASIC2.57□□□□□ -2
Traf1P39428 Gm26401-201ENSMUST00000158502 76 ntBASIC2.57□□□□□ -2
Traf1P39428 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.57□□□□□ -2
Traf1P39428 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC2.57□□□□□ -2
Traf1P39428 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.57□□□□□ -2
Traf1P39428 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC2.57□□□□□ -2
Traf1P39428 Gm18971-201ENSMUST00000197240 374 ntBASIC2.57□□□□□ -2
Traf1P39428 Gm43680-201ENSMUST00000199466 340 ntBASIC2.57□□□□□ -2
Traf1P39428 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.57□□□□□ -2
Traf1P39428 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.57□□□□□ -2
Traf1P39428 Gm18696-201ENSMUST00000220103 274 ntBASIC2.57□□□□□ -2
Traf1P39428 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.57□□□□□ -2
Traf1P39428 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.57□□□□□ -2
Traf1P39428 Gm24313-201ENSMUST00000082561 133 ntBASIC2.57□□□□□ -2
Traf1P39428 Gm26328-201ENSMUST00000082821 107 ntBASIC2.57□□□□□ -2
Traf1P39428 Gm25794-201ENSMUST00000083286 107 ntBASIC2.57□□□□□ -2
Traf1P39428 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC2.57□□□□□ -2
Traf1P39428 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC2.57□□□□□ -2
Traf1P39428 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Traf1P39428 Gm22834-201ENSMUST00000102021 79 ntBASIC2.56□□□□□ -2
Traf1P39428 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.56□□□□□ -2
Traf1P39428 Gm26335-201ENSMUST00000178449 107 ntBASIC2.56□□□□□ -2
Traf1P39428 Gm26652-202ENSMUST00000181672 475 ntBASIC2.56□□□□□ -2
Traf1P39428 Gm28343-201ENSMUST00000185386 112 ntBASIC2.56□□□□□ -2
Traf1P39428 Gm28437-201ENSMUST00000190277 783 ntBASIC2.56□□□□□ -2
Traf1P39428 Gm37550-201ENSMUST00000193230 463 ntBASIC2.56□□□□□ -2
Traf1P39428 Trbv18-201ENSMUST00000194256 294 ntBASIC2.56□□□□□ -2
Traf1P39428 Gm44336-201ENSMUST00000203696 468 ntBASIC2.56□□□□□ -2
Traf1P39428 Gm44182-201ENSMUST00000204052 115 ntBASIC2.56□□□□□ -2
Traf1P39428 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC2.56□□□□□ -2
Traf1P39428 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC2.56□□□□□ -2
Traf1P39428 AC129208.2-201ENSMUST00000228506 320 ntBASIC2.56□□□□□ -2
Traf1P39428 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.56□□□□□ -2
Traf1P39428 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.56□□□□□ -2
Traf1P39428 Gm26077-201ENSMUST00000104064 123 ntBASIC2.55□□□□□ -2
Traf1P39428 Gm22793-201ENSMUST00000157227 330 ntBASIC2.55□□□□□ -2
Traf1P39428 Gm25910-201ENSMUST00000157620 140 ntBASIC2.55□□□□□ -2
Traf1P39428 Gm24010-201ENSMUST00000157731 282 ntBASIC2.55□□□□□ -2
Traf1P39428 Gm25996-201ENSMUST00000175393 117 ntBASIC2.55□□□□□ -2
Traf1P39428 Gm21978-201ENSMUST00000179696 377 ntBASIC2.55□□□□□ -2
Traf1P39428 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC2.55□□□□□ -2
Traf1P39428 Gm43708-201ENSMUST00000198857 961 ntBASIC2.55□□□□□ -2
Traf1P39428 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.55□□□□□ -2
Traf1P39428 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC2.55□□□□□ -2
Traf1P39428 Gm45878-201ENSMUST00000211839 241 ntBASIC2.55□□□□□ -2
Traf1P39428 AL772265.1-201ENSMUST00000214379 305 ntBASIC2.55□□□□□ -2
Traf1P39428 CT009718.4-201ENSMUST00000221881 109 ntBASIC2.55□□□□□ -2
Traf1P39428 Gm6109-201ENSMUST00000223297 348 ntBASIC2.55□□□□□ -2
Traf1P39428 Gm24661-201ENSMUST00000083205 104 ntBASIC2.55□□□□□ -2
Traf1P39428 Mir30d-201ENSMUST00000083503 82 ntBASIC2.55□□□□□ -2
Traf1P39428 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.54□□□□□ -2
Traf1P39428 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC2.54□□□□□ -2
Traf1P39428 Gm14355-201ENSMUST00000117352 264 ntBASIC2.54□□□□□ -2
Traf1P39428 Gm26278-201ENSMUST00000157098 132 ntBASIC2.54□□□□□ -2
Traf1P39428 Gm22037-201ENSMUST00000157280 296 ntBASIC2.54□□□□□ -2
Traf1P39428 Gm22159-201ENSMUST00000158412 130 ntBASIC2.54□□□□□ -2
Traf1P39428 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC2.54□□□□□ -2
Traf1P39428 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Traf1P39428 Gm29604-201ENSMUST00000187176 163 ntBASIC2.54□□□□□ -2
Traf1P39428 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.54□□□□□ -2
Traf1P39428 AC116465.1-201ENSMUST00000220324 235 ntBASIC2.54□□□□□ -2
Traf1P39428 Gm46389-201ENSMUST00000223199 392 ntBASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms