Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm26077-201ENSMUST00000104064 123 ntBASIC1.79□□□□□ -2.12
P20040 Gm22494-201ENSMUST00000104495 128 ntBASIC1.79□□□□□ -2.12
P20040 Gm14530-201ENSMUST00000122391 333 ntBASIC1.79□□□□□ -2.12
P20040 Gm23469-201ENSMUST00000157131 104 ntBASIC1.79□□□□□ -2.12
P20040 Gm24053-201ENSMUST00000158620 105 ntBASIC1.79□□□□□ -2.12
P20040 Gm25162-201ENSMUST00000158906 159 ntBASIC1.79□□□□□ -2.12
P20040 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
P20040 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
P20040 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.79□□□□□ -2.12
P20040 Trbv22-201ENSMUST00000191697 291 ntBASIC1.79□□□□□ -2.12
P20040 Gm8747-201ENSMUST00000195392 751 ntBASIC1.79□□□□□ -2.12
P20040 Gm3724-201ENSMUST00000197957 349 ntBASIC1.79□□□□□ -2.12
P20040 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.79□□□□□ -2.12
P20040 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC1.79□□□□□ -2.12
P20040 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
P20040 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.79□□□□□ -2.12
P20040 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC1.79□□□□□ -2.12
P20040 AC124346.1-201ENSMUST00000218539 364 ntBASIC1.79□□□□□ -2.12
P20040 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.79□□□□□ -2.12
P20040 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
P20040 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
P20040 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.78□□□□□ -2.12
P20040 Gm24907-201ENSMUST00000116932 128 ntBASIC1.78□□□□□ -2.12
P20040 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC1.78□□□□□ -2.12
P20040 Gm23000-201ENSMUST00000157083 139 ntBASIC1.78□□□□□ -2.12
P20040 Gm23641-201ENSMUST00000157857 101 ntBASIC1.78□□□□□ -2.12
P20040 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.78□□□□□ -2.12
P20040 Gm23725-201ENSMUST00000177876 107 ntBASIC1.78□□□□□ -2.12
P20040 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC1.78□□□□□ -2.12
P20040 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
P20040 Gm11392-201ENSMUST00000181419 710 ntBASIC1.78□□□□□ -2.12
P20040 Gm27755-201ENSMUST00000184623 132 ntBASIC1.78□□□□□ -2.12
P20040 Mir7050-201ENSMUST00000184636 60 ntBASIC1.78□□□□□ -2.12
P20040 Gm18356-201ENSMUST00000185677 623 ntBASIC1.78□□□□□ -2.12
P20040 Gm37377-201ENSMUST00000191733 304 ntBASIC1.78□□□□□ -2.12
P20040 Gm38261-201ENSMUST00000192608 316 ntBASIC1.78□□□□□ -2.12
P20040 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
P20040 Gm44142-201ENSMUST00000203358 311 ntBASIC1.78□□□□□ -2.12
P20040 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.78□□□□□ -2.12
P20040 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC1.78□□□□□ -2.12
P20040 AC155715.1-201ENSMUST00000213575 463 ntBASIC1.78□□□□□ -2.12
P20040 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.78□□□□□ -2.12
P20040 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
P20040 Gm22978-201ENSMUST00000082607 160 ntBASIC1.78□□□□□ -2.12
P20040 Mir222-201ENSMUST00000083537 79 ntBASIC1.78□□□□□ -2.12
P20040 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
P20040 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.77□□□□□ -2.13
P20040 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
P20040 Gm25485-201ENSMUST00000104120 132 ntBASIC1.77□□□□□ -2.13
P20040 Mir669d-201ENSMUST00000104644 121 ntBASIC1.77□□□□□ -2.13
P20040 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
P20040 Gm13433-201ENSMUST00000121701 240 ntBASIC1.77□□□□□ -2.13
P20040 Gm11358-201ENSMUST00000122310 373 ntBASIC1.77□□□□□ -2.13
P20040 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.77□□□□□ -2.13
P20040 Gm24783-201ENSMUST00000157639 100 ntBASIC1.77□□□□□ -2.13
P20040 Gm22664-201ENSMUST00000158719 105 ntBASIC1.77□□□□□ -2.13
P20040 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.77□□□□□ -2.13
P20040 Gm22264-201ENSMUST00000178200 107 ntBASIC1.77□□□□□ -2.13
P20040 Gm25457-201ENSMUST00000179509 107 ntBASIC1.77□□□□□ -2.13
P20040 Gm27817-201ENSMUST00000184302 233 ntBASIC1.77□□□□□ -2.13
P20040 Mir7016-201ENSMUST00000184308 72 ntBASIC1.77□□□□□ -2.13
P20040 Gm28151-201ENSMUST00000189404 951 ntBASIC1.77□□□□□ -2.13
P20040 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.77□□□□□ -2.13
P20040 Gm43865-201ENSMUST00000204721 127 ntBASIC1.77□□□□□ -2.13
P20040 Gm45071-201ENSMUST00000205353 571 ntBASIC1.77□□□□□ -2.13
P20040 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.77□□□□□ -2.13
P20040 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC1.77□□□□□ -2.13
P20040 Gm18854-201ENSMUST00000211196 329 ntBASIC1.77□□□□□ -2.13
P20040 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.77□□□□□ -2.13
P20040 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.77□□□□□ -2.13
P20040 Gm25788-201ENSMUST00000082721 131 ntBASIC1.77□□□□□ -2.13
P20040 Mir300-201ENSMUST00000083485 79 ntBASIC1.77□□□□□ -2.13
P20040 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
P20040 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
P20040 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.77□□□□□ -2.13
P20040 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
P20040 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.76□□□□□ -2.13
P20040 Gm22771-201ENSMUST00000104449 91 ntBASIC1.76□□□□□ -2.13
P20040 Gm25507-201ENSMUST00000116981 144 ntBASIC1.76□□□□□ -2.13
P20040 Gm14894-201ENSMUST00000117170 270 ntBASIC1.76□□□□□ -2.13
P20040 Gm13885-201ENSMUST00000117569 187 ntBASIC1.76□□□□□ -2.13
P20040 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.76□□□□□ -2.13
P20040 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.76□□□□□ -2.13
P20040 Gm25625-201ENSMUST00000157221 96 ntBASIC1.76□□□□□ -2.13
P20040 Gm23342-201ENSMUST00000158958 115 ntBASIC1.76□□□□□ -2.13
P20040 Gm7925-201ENSMUST00000166690 401 ntBASIC1.76□□□□□ -2.13
P20040 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
P20040 Mir6950-201ENSMUST00000184438 73 ntBASIC1.76□□□□□ -2.13
P20040 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
P20040 Gm37449-201ENSMUST00000193016 270 ntBASIC1.76□□□□□ -2.13
P20040 Gm18658-201ENSMUST00000195558 270 ntBASIC1.76□□□□□ -2.13
P20040 Gm9402-201ENSMUST00000196849 388 ntBASIC1.76□□□□□ -2.13
P20040 Gm18971-201ENSMUST00000197240 374 ntBASIC1.76□□□□□ -2.13
P20040 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.76□□□□□ -2.13
P20040 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.76□□□□□ -2.13
P20040 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
P20040 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.76□□□□□ -2.13
P20040 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC1.76□□□□□ -2.13
P20040 AC117656.1-201ENSMUST00000225826 339 ntBASIC1.76□□□□□ -2.13
P20040 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms