Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Gm24448-201ENSMUST00000083979 107 ntBASIC2.6□□□□□ -1.99
Msh3P13705 Gm22798-201ENSMUST00000083992 107 ntBASIC2.6□□□□□ -1.99
Msh3P13705 Gm26427-201ENSMUST00000093648 107 ntBASIC2.6□□□□□ -1.99
Msh3P13705 Gm22886-201ENSMUST00000093714 107 ntBASIC2.6□□□□□ -1.99
Msh3P13705 Gm22365-201ENSMUST00000093750 117 ntBASIC2.6□□□□□ -1.99
Msh3P13705 Gm22170-201ENSMUST00000097247 107 ntBASIC2.6□□□□□ -1.99
Msh3P13705 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.6□□□□□ -1.99
Msh3P13705 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Msh3P13705 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Msh3P13705 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Msh3P13705 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Msh3P13705 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Msh3P13705 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
Msh3P13705 Gm42606-201ENSMUST00000114209 239 ntBASIC2.59□□□□□ -1.99
Msh3P13705 Gm26473-201ENSMUST00000116763 127 ntBASIC2.59□□□□□ -1.99
Msh3P13705 Gm15029-201ENSMUST00000119742 199 ntBASIC2.59□□□□□ -1.99
Msh3P13705 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.59□□□□□ -1.99
Msh3P13705 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.59□□□□□ -1.99
Msh3P13705 Gm24885-201ENSMUST00000158783 270 ntBASIC2.59□□□□□ -1.99
Msh3P13705 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC2.59□□□□□ -1.99
Msh3P13705 Gm24816-201ENSMUST00000175311 151 ntBASIC2.59□□□□□ -1.99
Msh3P13705 Mir3076-201ENSMUST00000175415 60 ntBASIC2.59□□□□□ -1.99
Msh3P13705 Gm26501-201ENSMUST00000178307 107 ntBASIC2.59□□□□□ -1.99
Msh3P13705 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Msh3P13705 Gm38041-201ENSMUST00000194445 661 ntBASIC2.59□□□□□ -1.99
Msh3P13705 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.59□□□□□ -1.99
Msh3P13705 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.59□□□□□ -1.99
Msh3P13705 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Msh3P13705 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.59□□□□□ -1.99
Msh3P13705 AC165106.2-201ENSMUST00000226749 97 ntBASIC2.59□□□□□ -1.99
Msh3P13705 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.59□□□□□ -1.99
Msh3P13705 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Msh3P13705 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Msh3P13705 Gm24274-201ENSMUST00000116787 124 ntBASIC2.58□□□□□ -2
Msh3P13705 Gm14940-201ENSMUST00000119309 495 ntBASIC2.58□□□□□ -2
Msh3P13705 Gm14574-201ENSMUST00000120644 279 ntBASIC2.58□□□□□ -2
Msh3P13705 Gm14821-201ENSMUST00000121975 435 ntBASIC2.58□□□□□ -2
Msh3P13705 Gm26256-201ENSMUST00000122499 186 ntBASIC2.58□□□□□ -2
Msh3P13705 Gm22791-201ENSMUST00000157232 145 ntBASIC2.58□□□□□ -2
Msh3P13705 Gm22328-201ENSMUST00000158074 112 ntBASIC2.58□□□□□ -2
Msh3P13705 Gm25866-201ENSMUST00000158245 112 ntBASIC2.58□□□□□ -2
Msh3P13705 Gm25863-201ENSMUST00000158249 329 ntBASIC2.58□□□□□ -2
Msh3P13705 Mir195b-201ENSMUST00000184814 97 ntBASIC2.58□□□□□ -2
Msh3P13705 Ighv1-28-201ENSMUST00000192987 351 ntBASIC2.58□□□□□ -2
Msh3P13705 Gm15235-201ENSMUST00000200572 194 ntBASIC2.58□□□□□ -2
Msh3P13705 Gm43976-201ENSMUST00000203637 235 ntBASIC2.58□□□□□ -2
Msh3P13705 Gm44524-201ENSMUST00000203899 271 ntBASIC2.58□□□□□ -2
Msh3P13705 Gm44687-201ENSMUST00000204975 235 ntBASIC2.58□□□□□ -2
Msh3P13705 AC164304.1-201ENSMUST00000226920 272 ntBASIC2.58□□□□□ -2
Msh3P13705 AC158981.3-202ENSMUST00000228906 523 ntBASIC2.58□□□□□ -2
Msh3P13705 Gm9174-201ENSMUST00000078149 255 ntBASIC2.58□□□□□ -2
Msh3P13705 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.58□□□□□ -2
Msh3P13705 AC117226.1-201ENSMUST00000221635 3737 ntBASIC2.57□□□□□ -2
Msh3P13705 Snord98-201ENSMUST00000116819 65 ntBASIC2.57□□□□□ -2
Msh3P13705 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.57□□□□□ -2
Msh3P13705 Gm15896-201ENSMUST00000118045 440 ntBASIC2.57□□□□□ -2
Msh3P13705 Gm14269-201ENSMUST00000120455 306 ntBASIC2.57□□□□□ -2
Msh3P13705 Gm13339-201ENSMUST00000120651 510 ntBASIC2.57□□□□□ -2
Msh3P13705 Gm13903-201ENSMUST00000120945 193 ntBASIC2.57□□□□□ -2
Msh3P13705 Gm25827-201ENSMUST00000157089 107 ntBASIC2.57□□□□□ -2
Msh3P13705 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Msh3P13705 Gm23660-201ENSMUST00000178362 79 ntBASIC2.57□□□□□ -2
Msh3P13705 Gm24088-201ENSMUST00000179100 79 ntBASIC2.57□□□□□ -2
Msh3P13705 Gm27220-201ENSMUST00000183453 262 ntBASIC2.57□□□□□ -2
Msh3P13705 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC2.57□□□□□ -2
Msh3P13705 Gm20058-201ENSMUST00000186939 284 ntBASIC2.57□□□□□ -2
Msh3P13705 Gm34073-201ENSMUST00000195736 212 ntBASIC2.57□□□□□ -2
Msh3P13705 Gm43722-201ENSMUST00000196054 124 ntBASIC2.57□□□□□ -2
Msh3P13705 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.57□□□□□ -2
Msh3P13705 Gm43505-201ENSMUST00000200579 139 ntBASIC2.57□□□□□ -2
Msh3P13705 Gm9377-201ENSMUST00000207227 623 ntBASIC2.57□□□□□ -2
Msh3P13705 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.57□□□□□ -2
Msh3P13705 Gm10298-201ENSMUST00000074801 265 ntBASIC2.57□□□□□ -2
Msh3P13705 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC2.57□□□□□ -2
Msh3P13705 Gm23096-201ENSMUST00000083447 107 ntBASIC2.57□□□□□ -2
Msh3P13705 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Msh3P13705 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.57□□□□□ -2
Msh3P13705 Gm23472-201ENSMUST00000101806 191 ntBASIC2.56□□□□□ -2
Msh3P13705 Mir344c-201ENSMUST00000103919 92 ntBASIC2.56□□□□□ -2
Msh3P13705 Gm15714-201ENSMUST00000117168 250 ntBASIC2.56□□□□□ -2
Msh3P13705 Gm13581-201ENSMUST00000120675 278 ntBASIC2.56□□□□□ -2
Msh3P13705 Gm12876-201ENSMUST00000120975 408 ntBASIC2.56□□□□□ -2
Msh3P13705 Gm13409-201ENSMUST00000122072 546 ntBASIC2.56□□□□□ -2
Msh3P13705 Gm25325-201ENSMUST00000122559 86 ntBASIC2.56□□□□□ -2
Msh3P13705 Gm23889-201ENSMUST00000122689 104 ntBASIC2.56□□□□□ -2
Msh3P13705 Gm23642-201ENSMUST00000157858 258 ntBASIC2.56□□□□□ -2
Msh3P13705 Gm27510-201ENSMUST00000158214 64 ntBASIC2.56□□□□□ -2
Msh3P13705 Gm26214-201ENSMUST00000158581 107 ntBASIC2.56□□□□□ -2
Msh3P13705 Gm25162-201ENSMUST00000158906 159 ntBASIC2.56□□□□□ -2
Msh3P13705 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC2.56□□□□□ -2
Msh3P13705 Mir5099-201ENSMUST00000175257 74 ntBASIC2.56□□□□□ -2
Msh3P13705 Gm24497-201ENSMUST00000177868 191 ntBASIC2.56□□□□□ -2
Msh3P13705 Gm25939-201ENSMUST00000179876 191 ntBASIC2.56□□□□□ -2
Msh3P13705 Gm5329-201ENSMUST00000186898 463 ntBASIC2.56□□□□□ -2
Msh3P13705 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.56□□□□□ -2
Msh3P13705 Gm37128-201ENSMUST00000192599 232 ntBASIC2.56□□□□□ -2
Msh3P13705 Mir6925-201ENSMUST00000197857 70 ntBASIC2.56□□□□□ -2
Msh3P13705 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.56□□□□□ -2
Msh3P13705 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.56□□□□□ -2
Msh3P13705 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 108.6 ms