Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm22501-201ENSMUST00000158981 127 ntBASIC4.04□□□□□ -1.76
RaraP11416 Gm37431-201ENSMUST00000195102 111 ntBASIC4.04□□□□□ -1.76
RaraP11416 Gm43680-201ENSMUST00000199466 340 ntBASIC4.04□□□□□ -1.76
RaraP11416 AC122242.1-201ENSMUST00000224650 304 ntBASIC4.04□□□□□ -1.76
RaraP11416 Gm42870-201ENSMUST00000199355 3470 ntBASIC4.04□□□□□ -1.76
RaraP11416 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
RaraP11416 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
RaraP11416 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
RaraP11416 Gm15497-201ENSMUST00000119137 551 ntBASIC4.03□□□□□ -1.76
RaraP11416 Gm15799-201ENSMUST00000120899 289 ntBASIC4.03□□□□□ -1.76
RaraP11416 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC4.03□□□□□ -1.76
RaraP11416 Gm23123-201ENSMUST00000157648 144 ntBASIC4.03□□□□□ -1.76
RaraP11416 Gm24959-201ENSMUST00000157924 146 ntBASIC4.03□□□□□ -1.76
RaraP11416 Gm24727-201ENSMUST00000158231 144 ntBASIC4.03□□□□□ -1.76
RaraP11416 Gm24503-201ENSMUST00000158454 135 ntBASIC4.03□□□□□ -1.76
RaraP11416 Gm22889-201ENSMUST00000158639 58 ntBASIC4.03□□□□□ -1.76
RaraP11416 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC4.03□□□□□ -1.76
RaraP11416 Gm22699-201ENSMUST00000175376 105 ntBASIC4.03□□□□□ -1.76
RaraP11416 Gm25999-201ENSMUST00000175398 133 ntBASIC4.03□□□□□ -1.76
RaraP11416 Gm27445-201ENSMUST00000184484 72 ntBASIC4.03□□□□□ -1.76
RaraP11416 Gm28828-201ENSMUST00000186601 696 ntBASIC4.03□□□□□ -1.76
RaraP11416 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC4.03□□□□□ -1.76
RaraP11416 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.03□□□□□ -1.76
RaraP11416 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.03□□□□□ -1.76
RaraP11416 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
RaraP11416 AC166113.1-201ENSMUST00000225258 475 ntBASIC4.03□□□□□ -1.76
RaraP11416 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
RaraP11416 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.03□□□□□ -1.76
RaraP11416 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
RaraP11416 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
RaraP11416 Gm38207-201ENSMUST00000193009 3505 ntBASIC4.03□□□□□ -1.76
RaraP11416 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
RaraP11416 Gm24982-201ENSMUST00000104456 132 ntBASIC4.02□□□□□ -1.77
RaraP11416 Gm12934-201ENSMUST00000119221 343 ntBASIC4.02□□□□□ -1.77
RaraP11416 Gm14402-201ENSMUST00000122217 508 ntBASIC4.02□□□□□ -1.77
RaraP11416 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC4.02□□□□□ -1.77
RaraP11416 Gm25386-201ENSMUST00000157814 288 ntBASIC4.02□□□□□ -1.77
RaraP11416 Gm16404-201ENSMUST00000177739 468 ntBASIC4.02□□□□□ -1.77
RaraP11416 Gm14598-201ENSMUST00000180109 468 ntBASIC4.02□□□□□ -1.77
RaraP11416 Gm14625-201ENSMUST00000180231 468 ntBASIC4.02□□□□□ -1.77
RaraP11416 Mir6345-201ENSMUST00000184286 128 ntBASIC4.02□□□□□ -1.77
RaraP11416 Gm6003-201ENSMUST00000187903 463 ntBASIC4.02□□□□□ -1.77
RaraP11416 Gm37001-201ENSMUST00000193377 190 ntBASIC4.02□□□□□ -1.77
RaraP11416 Gm43563-201ENSMUST00000196761 198 ntBASIC4.02□□□□□ -1.77
RaraP11416 Gm45543-201ENSMUST00000209327 88 ntBASIC4.02□□□□□ -1.77
RaraP11416 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.02□□□□□ -1.77
RaraP11416 AC154481.2-201ENSMUST00000222526 3175 ntBASIC4.02□□□□□ -1.77
RaraP11416 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
RaraP11416 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC4.01□□□□□ -1.77
RaraP11416 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
RaraP11416 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
RaraP11416 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
RaraP11416 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
RaraP11416 Gm25765-201ENSMUST00000104100 132 ntBASIC4.01□□□□□ -1.77
RaraP11416 Gm24281-201ENSMUST00000104234 136 ntBASIC4.01□□□□□ -1.77
RaraP11416 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC4.01□□□□□ -1.77
RaraP11416 Gm14215-201ENSMUST00000120578 221 ntBASIC4.01□□□□□ -1.77
RaraP11416 Gm23960-201ENSMUST00000157206 131 ntBASIC4.01□□□□□ -1.77
RaraP11416 Gm16162-201ENSMUST00000162296 297 ntBASIC4.01□□□□□ -1.77
RaraP11416 Gm24304-201ENSMUST00000177635 107 ntBASIC4.01□□□□□ -1.77
RaraP11416 Gm27271-201ENSMUST00000183509 170 ntBASIC4.01□□□□□ -1.77
RaraP11416 Gm27753-201ENSMUST00000184742 203 ntBASIC4.01□□□□□ -1.77
RaraP11416 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC4.01□□□□□ -1.77
RaraP11416 Gm43604-201ENSMUST00000199799 705 ntBASIC4.01□□□□□ -1.77
RaraP11416 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.01□□□□□ -1.77
RaraP11416 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.01□□□□□ -1.77
RaraP11416 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
RaraP11416 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
RaraP11416 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
RaraP11416 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
RaraP11416 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
RaraP11416 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4□□□□□ -1.77
RaraP11416 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
RaraP11416 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
RaraP11416 Gm27047-201ENSMUST00000183072 1819 ntBASIC4□□□□□ -1.77
RaraP11416 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RaraP11416 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC4□□□□□ -1.77
RaraP11416 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
RaraP11416 Gm23651-201ENSMUST00000116755 120 ntBASIC4□□□□□ -1.77
RaraP11416 Gm23492-201ENSMUST00000116837 115 ntBASIC4□□□□□ -1.77
RaraP11416 Gm11982-201ENSMUST00000121480 314 ntBASIC4□□□□□ -1.77
RaraP11416 Gm24244-201ENSMUST00000157317 130 ntBASIC4□□□□□ -1.77
RaraP11416 Gm22890-201ENSMUST00000158642 144 ntBASIC4□□□□□ -1.77
RaraP11416 Gm22120-201ENSMUST00000175590 70 ntBASIC4□□□□□ -1.77
RaraP11416 Ang-ps3-201ENSMUST00000177964 433 ntBASIC4□□□□□ -1.77
RaraP11416 Ang-ps2-201ENSMUST00000178173 433 ntBASIC4□□□□□ -1.77
RaraP11416 Gm28267-201ENSMUST00000191093 265 ntBASIC4□□□□□ -1.77
RaraP11416 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC4□□□□□ -1.77
RaraP11416 Gm44521-201ENSMUST00000206469 217 ntBASIC4□□□□□ -1.77
RaraP11416 CT030242.2-201ENSMUST00000221588 148 ntBASIC4□□□□□ -1.77
RaraP11416 Gm5548-201ENSMUST00000055878 397 ntBASIC4□□□□□ -1.77
RaraP11416 Gm23722-201ENSMUST00000083002 130 ntBASIC4□□□□□ -1.77
RaraP11416 Mir26a-1-201ENSMUST00000083579 90 ntBASIC4□□□□□ -1.77
RaraP11416 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
RaraP11416 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
RaraP11416 Gm14299-201ENSMUST00000117586 397 ntBASIC3.99□□□□□ -1.77
RaraP11416 Gm13797-201ENSMUST00000121792 120 ntBASIC3.99□□□□□ -1.77
RaraP11416 Gm22957-201ENSMUST00000122511 123 ntBASIC3.99□□□□□ -1.77
RaraP11416 n-R5s150-201ENSMUST00000122705 108 ntBASIC3.99□□□□□ -1.77
RaraP11416 Gm5963-201ENSMUST00000143451 236 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms