Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 AC167140.1-201ENSMUST00000224710 403 ntBASIC2.15□□□□□ -2.07
Lire1P11260 Gm24805-201ENSMUST00000082931 104 ntBASIC2.15□□□□□ -2.07
Lire1P11260 Gm23462-201ENSMUST00000083264 104 ntBASIC2.15□□□□□ -2.07
Lire1P11260 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
Lire1P11260 Gm25094-201ENSMUST00000103992 131 ntBASIC2.14□□□□□ -2.07
Lire1P11260 Gm14943-201ENSMUST00000118056 546 ntBASIC2.14□□□□□ -2.07
Lire1P11260 Gm12806-201ENSMUST00000119384 268 ntBASIC2.14□□□□□ -2.07
Lire1P11260 Gm24419-201ENSMUST00000157875 332 ntBASIC2.14□□□□□ -2.07
Lire1P11260 Gm24333-201ENSMUST00000175101 84 ntBASIC2.14□□□□□ -2.07
Lire1P11260 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.14□□□□□ -2.07
Lire1P11260 Gm24862-201ENSMUST00000179103 79 ntBASIC2.14□□□□□ -2.07
Lire1P11260 Gm23310-201ENSMUST00000179105 79 ntBASIC2.14□□□□□ -2.07
Lire1P11260 Gm25461-201ENSMUST00000179293 79 ntBASIC2.14□□□□□ -2.07
Lire1P11260 Gm27399-201ENSMUST00000184250 78 ntBASIC2.14□□□□□ -2.07
Lire1P11260 Mir7009-201ENSMUST00000184519 64 ntBASIC2.14□□□□□ -2.07
Lire1P11260 Mir7226-201ENSMUST00000184953 60 ntBASIC2.14□□□□□ -2.07
Lire1P11260 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2.14□□□□□ -2.07
Lire1P11260 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC2.14□□□□□ -2.07
Lire1P11260 Gm25820-202ENSMUST00000197479 128 ntBASIC2.14□□□□□ -2.07
Lire1P11260 Gm44477-201ENSMUST00000199661 110 ntBASIC2.14□□□□□ -2.07
Lire1P11260 Gm43513-201ENSMUST00000199779 1076 ntBASIC2.14□□□□□ -2.07
Lire1P11260 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.14□□□□□ -2.07
Lire1P11260 AC069074.1-201ENSMUST00000220048 381 ntBASIC2.14□□□□□ -2.07
Lire1P11260 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC2.14□□□□□ -2.07
Lire1P11260 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Lire1P11260 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Lire1P11260 Gm22299-201ENSMUST00000082663 136 ntBASIC2.14□□□□□ -2.07
Lire1P11260 Gm22577-201ENSMUST00000083731 109 ntBASIC2.14□□□□□ -2.07
Lire1P11260 Snord38a-201ENSMUST00000083746 71 ntBASIC2.14□□□□□ -2.07
Lire1P11260 Gm20541-201ENSMUST00000173035 1406 ntBASIC2.14□□□□□ -2.07
Lire1P11260 Gm37096-201ENSMUST00000192317 2058 ntBASIC2.14□□□□□ -2.07
Lire1P11260 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Lire1P11260 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.13□□□□□ -2.07
Lire1P11260 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Lire1P11260 Gm22591-201ENSMUST00000104243 106 ntBASIC2.13□□□□□ -2.07
Lire1P11260 Mir873a-201ENSMUST00000104863 77 ntBASIC2.13□□□□□ -2.07
Lire1P11260 Gm14652-201ENSMUST00000118479 235 ntBASIC2.13□□□□□ -2.07
Lire1P11260 Gm12871-201ENSMUST00000118758 438 ntBASIC2.13□□□□□ -2.07
Lire1P11260 Gm5396-201ENSMUST00000121222 532 ntBASIC2.13□□□□□ -2.07
Lire1P11260 Gm14366-201ENSMUST00000121970 730 ntBASIC2.13□□□□□ -2.07
Lire1P11260 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.13□□□□□ -2.07
Lire1P11260 Gm22817-201ENSMUST00000157448 356 ntBASIC2.13□□□□□ -2.07
Lire1P11260 Gm23043-201ENSMUST00000157890 109 ntBASIC2.13□□□□□ -2.07
Lire1P11260 Gm24212-201ENSMUST00000158258 132 ntBASIC2.13□□□□□ -2.07
Lire1P11260 Snord87-201ENSMUST00000175437 87 ntBASIC2.13□□□□□ -2.07
Lire1P11260 Gm3852-201ENSMUST00000182781 264 ntBASIC2.13□□□□□ -2.07
Lire1P11260 Mir6995-201ENSMUST00000183658 71 ntBASIC2.13□□□□□ -2.07
Lire1P11260 Gm43739-201ENSMUST00000198294 307 ntBASIC2.13□□□□□ -2.07
Lire1P11260 Gm43587-201ENSMUST00000199590 204 ntBASIC2.13□□□□□ -2.07
Lire1P11260 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Lire1P11260 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.13□□□□□ -2.07
Lire1P11260 Gm44881-201ENSMUST00000205425 367 ntBASIC2.13□□□□□ -2.07
Lire1P11260 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.13□□□□□ -2.07
Lire1P11260 AC153646.1-201ENSMUST00000223229 1279 ntBASIC2.13□□□□□ -2.07
Lire1P11260 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.13□□□□□ -2.07
Lire1P11260 CT025689.4-201ENSMUST00000225926 601 ntBASIC2.13□□□□□ -2.07
Lire1P11260 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.13□□□□□ -2.07
Lire1P11260 Gm16510-201ENSMUST00000153501 249 ntBASIC2.12□□□□□ -2.07
Lire1P11260 Gm23352-201ENSMUST00000158428 64 ntBASIC2.12□□□□□ -2.07
Lire1P11260 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.12□□□□□ -2.07
Lire1P11260 Gm26622-201ENSMUST00000180520 298 ntBASIC2.12□□□□□ -2.07
Lire1P11260 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Lire1P11260 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2.12□□□□□ -2.07
Lire1P11260 Gm18357-201ENSMUST00000188184 580 ntBASIC2.12□□□□□ -2.07
Lire1P11260 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Lire1P11260 Gm43914-201ENSMUST00000203592 594 ntBASIC2.12□□□□□ -2.07
Lire1P11260 Gm44870-201ENSMUST00000207291 357 ntBASIC2.12□□□□□ -2.07
Lire1P11260 Gm45754-201ENSMUST00000212380 279 ntBASIC2.12□□□□□ -2.07
Lire1P11260 Gm8031-201ENSMUST00000213430 626 ntBASIC2.12□□□□□ -2.07
Lire1P11260 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.12□□□□□ -2.07
Lire1P11260 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC2.12□□□□□ -2.07
Lire1P11260 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC2.12□□□□□ -2.07
Lire1P11260 AC124569.4-201ENSMUST00000223830 1220 ntBASIC2.12□□□□□ -2.07
Lire1P11260 CT485608.2-201ENSMUST00000227210 291 ntBASIC2.12□□□□□ -2.07
Lire1P11260 Gm25130-201ENSMUST00000082650 156 ntBASIC2.12□□□□□ -2.07
Lire1P11260 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Lire1P11260 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Lire1P11260 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
Lire1P11260 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.11□□□□□ -2.07
Lire1P11260 Gm22752-201ENSMUST00000102083 109 ntBASIC2.11□□□□□ -2.07
Lire1P11260 Gm24984-201ENSMUST00000104454 133 ntBASIC2.11□□□□□ -2.07
Lire1P11260 Gm13672-201ENSMUST00000117554 459 ntBASIC2.11□□□□□ -2.07
Lire1P11260 Gm12053-201ENSMUST00000119022 252 ntBASIC2.11□□□□□ -2.07
Lire1P11260 Gm23589-201ENSMUST00000157660 105 ntBASIC2.11□□□□□ -2.07
Lire1P11260 Gm24222-201ENSMUST00000158834 93 ntBASIC2.11□□□□□ -2.07
Lire1P11260 Gm27660-201ENSMUST00000184028 208 ntBASIC2.11□□□□□ -2.07
Lire1P11260 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.11□□□□□ -2.07
Lire1P11260 Gm38333-201ENSMUST00000193608 604 ntBASIC2.11□□□□□ -2.07
Lire1P11260 Gm43556-201ENSMUST00000196186 681 ntBASIC2.11□□□□□ -2.07
Lire1P11260 Gm45252-201ENSMUST00000211579 397 ntBASIC2.11□□□□□ -2.07
Lire1P11260 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.11□□□□□ -2.07
Lire1P11260 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
Lire1P11260 Gm24165-201ENSMUST00000082718 128 ntBASIC2.11□□□□□ -2.07
Lire1P11260 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Lire1P11260 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.1□□□□□ -2.07
Lire1P11260 Mir344e-201ENSMUST00000104677 66 ntBASIC2.1□□□□□ -2.07
Lire1P11260 Gm20689-201ENSMUST00000176033 279 ntBASIC2.1□□□□□ -2.07
Lire1P11260 Gm23144-201ENSMUST00000180226 107 ntBASIC2.1□□□□□ -2.07
Lire1P11260 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC2.1□□□□□ -2.07
Lire1P11260 Gm37727-201ENSMUST00000191637 819 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 115.9 ms