Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm42509-201ENSMUST00000197390 781 ntBASIC1.86□□□□□ -2.11
Chmp6P0C0A3 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC1.86□□□□□ -2.11
Chmp6P0C0A3 AC159203.2-201ENSMUST00000221326 193 ntBASIC1.86□□□□□ -2.11
Chmp6P0C0A3 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC1.86□□□□□ -2.11
Chmp6P0C0A3 Gm25698-201ENSMUST00000082897 107 ntBASIC1.86□□□□□ -2.11
Chmp6P0C0A3 Gm24412-201ENSMUST00000083426 109 ntBASIC1.86□□□□□ -2.11
Chmp6P0C0A3 Mir107-201ENSMUST00000083660 87 ntBASIC1.86□□□□□ -2.11
Chmp6P0C0A3 Gm22723-201ENSMUST00000083820 129 ntBASIC1.86□□□□□ -2.11
Chmp6P0C0A3 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC1.86□□□□□ -2.11
Chmp6P0C0A3 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Chmp6P0C0A3 Gm12639-201ENSMUST00000121400 493 ntBASIC1.85□□□□□ -2.11
Chmp6P0C0A3 Gm24394-201ENSMUST00000158141 123 ntBASIC1.85□□□□□ -2.11
Chmp6P0C0A3 Gm26024-201ENSMUST00000158657 322 ntBASIC1.85□□□□□ -2.11
Chmp6P0C0A3 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Chmp6P0C0A3 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Chmp6P0C0A3 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Chmp6P0C0A3 Gm21885-201ENSMUST00000178891 327 ntBASIC1.85□□□□□ -2.11
Chmp6P0C0A3 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Chmp6P0C0A3 Gm21978-201ENSMUST00000179696 377 ntBASIC1.85□□□□□ -2.11
Chmp6P0C0A3 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Chmp6P0C0A3 Gm27511-201ENSMUST00000183502 127 ntBASIC1.85□□□□□ -2.11
Chmp6P0C0A3 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Chmp6P0C0A3 Gm37709-201ENSMUST00000195074 600 ntBASIC1.85□□□□□ -2.11
Chmp6P0C0A3 Gm42807-201ENSMUST00000200141 329 ntBASIC1.85□□□□□ -2.11
Chmp6P0C0A3 Gm45071-201ENSMUST00000205353 571 ntBASIC1.85□□□□□ -2.11
Chmp6P0C0A3 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Chmp6P0C0A3 AC121844.1-201ENSMUST00000218706 137 ntBASIC1.85□□□□□ -2.11
Chmp6P0C0A3 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.85□□□□□ -2.11
Chmp6P0C0A3 Gm24165-201ENSMUST00000082718 128 ntBASIC1.85□□□□□ -2.11
Chmp6P0C0A3 Mir10a-201ENSMUST00000083585 110 ntBASIC1.85□□□□□ -2.11
Chmp6P0C0A3 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.85□□□□□ -2.11
Chmp6P0C0A3 Gm22831-201ENSMUST00000102473 109 ntBASIC1.84□□□□□ -2.11
Chmp6P0C0A3 Gm12393-201ENSMUST00000117084 848 ntBASIC1.84□□□□□ -2.11
Chmp6P0C0A3 Gm13885-201ENSMUST00000117569 187 ntBASIC1.84□□□□□ -2.11
Chmp6P0C0A3 Gm22733-201ENSMUST00000158094 91 ntBASIC1.84□□□□□ -2.11
Chmp6P0C0A3 Gm18417-201ENSMUST00000176564 648 ntBASIC1.84□□□□□ -2.11
Chmp6P0C0A3 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC1.84□□□□□ -2.11
Chmp6P0C0A3 Mir7014-201ENSMUST00000183853 63 ntBASIC1.84□□□□□ -2.11
Chmp6P0C0A3 Gm27588-201ENSMUST00000185096 263 ntBASIC1.84□□□□□ -2.11
Chmp6P0C0A3 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.84□□□□□ -2.11
Chmp6P0C0A3 Gm37361-201ENSMUST00000194345 132 ntBASIC1.84□□□□□ -2.11
Chmp6P0C0A3 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.84□□□□□ -2.11
Chmp6P0C0A3 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.84□□□□□ -2.11
Chmp6P0C0A3 Gm26228-201ENSMUST00000082512 107 ntBASIC1.84□□□□□ -2.11
Chmp6P0C0A3 Gm25080-201ENSMUST00000082526 107 ntBASIC1.84□□□□□ -2.11
Chmp6P0C0A3 Gm25518-201ENSMUST00000083864 107 ntBASIC1.84□□□□□ -2.11
Chmp6P0C0A3 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Chmp6P0C0A3 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.84□□□□□ -2.12
Chmp6P0C0A3 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Chmp6P0C0A3 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Chmp6P0C0A3 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Chmp6P0C0A3 Mir582-201ENSMUST00000103758 81 ntBASIC1.83□□□□□ -2.12
Chmp6P0C0A3 n-R5s202-201ENSMUST00000104517 114 ntBASIC1.83□□□□□ -2.12
Chmp6P0C0A3 Gm22678-201ENSMUST00000116974 101 ntBASIC1.83□□□□□ -2.12
Chmp6P0C0A3 Gm14793-201ENSMUST00000118739 311 ntBASIC1.83□□□□□ -2.12
Chmp6P0C0A3 Gm11786-201ENSMUST00000120799 155 ntBASIC1.83□□□□□ -2.12
Chmp6P0C0A3 Gm14638-201ENSMUST00000121338 216 ntBASIC1.83□□□□□ -2.12
Chmp6P0C0A3 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.83□□□□□ -2.12
Chmp6P0C0A3 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC1.83□□□□□ -2.12
Chmp6P0C0A3 Gm22793-201ENSMUST00000157227 330 ntBASIC1.83□□□□□ -2.12
Chmp6P0C0A3 Gm23025-201ENSMUST00000158769 111 ntBASIC1.83□□□□□ -2.12
Chmp6P0C0A3 Gm3111-201ENSMUST00000167426 490 ntBASIC1.83□□□□□ -2.12
Chmp6P0C0A3 Gm24518-201ENSMUST00000180275 94 ntBASIC1.83□□□□□ -2.12
Chmp6P0C0A3 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC1.83□□□□□ -2.12
Chmp6P0C0A3 Gm27722-201ENSMUST00000183908 76 ntBASIC1.83□□□□□ -2.12
Chmp6P0C0A3 Gm27878-201ENSMUST00000184000 106 ntBASIC1.83□□□□□ -2.12
Chmp6P0C0A3 Gm18356-201ENSMUST00000185677 623 ntBASIC1.83□□□□□ -2.12
Chmp6P0C0A3 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Chmp6P0C0A3 Gm44011-201ENSMUST00000203336 394 ntBASIC1.83□□□□□ -2.12
Chmp6P0C0A3 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.83□□□□□ -2.12
Chmp6P0C0A3 Snora33-201ENSMUST00000093556 129 ntBASIC1.83□□□□□ -2.12
Chmp6P0C0A3 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Chmp6P0C0A3 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Chmp6P0C0A3 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Chmp6P0C0A3 Gm20541-201ENSMUST00000173035 1406 ntBASIC1.83□□□□□ -2.12
Chmp6P0C0A3 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Chmp6P0C0A3 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Chmp6P0C0A3 Mir3096-201ENSMUST00000116685 71 ntBASIC1.82□□□□□ -2.12
Chmp6P0C0A3 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.82□□□□□ -2.12
Chmp6P0C0A3 Gm12926-201ENSMUST00000121158 409 ntBASIC1.82□□□□□ -2.12
Chmp6P0C0A3 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.82□□□□□ -2.12
Chmp6P0C0A3 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.82□□□□□ -2.12
Chmp6P0C0A3 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.82□□□□□ -2.12
Chmp6P0C0A3 Gm23048-201ENSMUST00000157237 129 ntBASIC1.82□□□□□ -2.12
Chmp6P0C0A3 Gm25888-201ENSMUST00000157778 302 ntBASIC1.82□□□□□ -2.12
Chmp6P0C0A3 Gm25413-201ENSMUST00000158544 312 ntBASIC1.82□□□□□ -2.12
Chmp6P0C0A3 Gm5277-201ENSMUST00000164923 556 ntBASIC1.82□□□□□ -2.12
Chmp6P0C0A3 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.82□□□□□ -2.12
Chmp6P0C0A3 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Chmp6P0C0A3 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC1.82□□□□□ -2.12
Chmp6P0C0A3 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Chmp6P0C0A3 Gm38333-201ENSMUST00000193608 604 ntBASIC1.82□□□□□ -2.12
Chmp6P0C0A3 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.82□□□□□ -2.12
Chmp6P0C0A3 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.82□□□□□ -2.12
Chmp6P0C0A3 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.82□□□□□ -2.12
Chmp6P0C0A3 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Chmp6P0C0A3 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Chmp6P0C0A3 Gm26922-201ENSMUST00000082687 72 ntBASIC1.82□□□□□ -2.12
Chmp6P0C0A3 Mir29c-201ENSMUST00000083614 88 ntBASIC1.82□□□□□ -2.12
Chmp6P0C0A3 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms