Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm25879-201ENSMUST00000104330 107 ntBASIC2.86□□□□□ -1.95
Col3a1P08121 Snora36b-201ENSMUST00000104383 132 ntBASIC2.86□□□□□ -1.95
Col3a1P08121 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Col3a1P08121 Gm12686-201ENSMUST00000120546 397 ntBASIC2.86□□□□□ -1.95
Col3a1P08121 Gm11582-201ENSMUST00000121041 236 ntBASIC2.86□□□□□ -1.95
Col3a1P08121 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC2.86□□□□□ -1.95
Col3a1P08121 Gm22037-201ENSMUST00000157280 296 ntBASIC2.86□□□□□ -1.95
Col3a1P08121 Gm26348-201ENSMUST00000157528 240 ntBASIC2.86□□□□□ -1.95
Col3a1P08121 Gm7953-201ENSMUST00000168278 469 ntBASIC2.86□□□□□ -1.95
Col3a1P08121 Gm26960-201ENSMUST00000182263 412 ntBASIC2.86□□□□□ -1.95
Col3a1P08121 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC2.86□□□□□ -1.95
Col3a1P08121 Gm29192-201ENSMUST00000190942 377 ntBASIC2.86□□□□□ -1.95
Col3a1P08121 Igkv15-102-201ENSMUST00000197885 287 ntBASIC2.86□□□□□ -1.95
Col3a1P08121 Gm43626-201ENSMUST00000198575 162 ntBASIC2.86□□□□□ -1.95
Col3a1P08121 Gm44348-201ENSMUST00000200165 122 ntBASIC2.86□□□□□ -1.95
Col3a1P08121 Gm45005-201ENSMUST00000206640 157 ntBASIC2.86□□□□□ -1.95
Col3a1P08121 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.86□□□□□ -1.95
Col3a1P08121 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
Col3a1P08121 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Col3a1P08121 Gm25094-201ENSMUST00000103992 131 ntBASIC2.85□□□□□ -1.95
Col3a1P08121 Gm13046-201ENSMUST00000117391 501 ntBASIC2.85□□□□□ -1.95
Col3a1P08121 Gm14823-201ENSMUST00000117698 238 ntBASIC2.85□□□□□ -1.95
Col3a1P08121 Gm8217-201ENSMUST00000119136 465 ntBASIC2.85□□□□□ -1.95
Col3a1P08121 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.85□□□□□ -1.95
Col3a1P08121 Gm23350-201ENSMUST00000158429 103 ntBASIC2.85□□□□□ -1.95
Col3a1P08121 Gm24100-201ENSMUST00000178592 79 ntBASIC2.85□□□□□ -1.95
Col3a1P08121 Gm24464-201ENSMUST00000179697 107 ntBASIC2.85□□□□□ -1.95
Col3a1P08121 Gm24137-201ENSMUST00000180055 79 ntBASIC2.85□□□□□ -1.95
Col3a1P08121 Gm22391-201ENSMUST00000180356 79 ntBASIC2.85□□□□□ -1.95
Col3a1P08121 Mir7026-201ENSMUST00000184384 67 ntBASIC2.85□□□□□ -1.95
Col3a1P08121 Gm28744-201ENSMUST00000189939 340 ntBASIC2.85□□□□□ -1.95
Col3a1P08121 Gm38183-201ENSMUST00000193189 205 ntBASIC2.85□□□□□ -1.95
Col3a1P08121 Gm42570-201ENSMUST00000195937 292 ntBASIC2.85□□□□□ -1.95
Col3a1P08121 Gm45367-201ENSMUST00000210171 347 ntBASIC2.85□□□□□ -1.95
Col3a1P08121 AC147633.1-201ENSMUST00000225134 259 ntBASIC2.85□□□□□ -1.95
Col3a1P08121 AC123656.2-201ENSMUST00000226726 227 ntBASIC2.85□□□□□ -1.95
Col3a1P08121 AC112935.1-201ENSMUST00000227603 250 ntBASIC2.85□□□□□ -1.95
Col3a1P08121 mt-Ti-201ENSMUST00000082393 69 ntBASIC2.85□□□□□ -1.95
Col3a1P08121 Gm25482-201ENSMUST00000083225 107 ntBASIC2.85□□□□□ -1.95
Col3a1P08121 Gm26263-201ENSMUST00000083281 164 ntBASIC2.85□□□□□ -1.95
Col3a1P08121 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Col3a1P08121 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Col3a1P08121 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.84□□□□□ -1.95
Col3a1P08121 Gm13239-201ENSMUST00000119920 637 ntBASIC2.84□□□□□ -1.95
Col3a1P08121 Gm14591-201ENSMUST00000120407 518 ntBASIC2.84□□□□□ -1.95
Col3a1P08121 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC2.84□□□□□ -1.95
Col3a1P08121 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.84□□□□□ -1.95
Col3a1P08121 Gm26101-201ENSMUST00000157246 105 ntBASIC2.84□□□□□ -1.95
Col3a1P08121 Gm23901-201ENSMUST00000157570 107 ntBASIC2.84□□□□□ -1.95
Col3a1P08121 Gm24784-201ENSMUST00000157640 62 ntBASIC2.84□□□□□ -1.95
Col3a1P08121 Gm19193-201ENSMUST00000190263 590 ntBASIC2.84□□□□□ -1.95
Col3a1P08121 Gm43587-201ENSMUST00000199590 204 ntBASIC2.84□□□□□ -1.95
Col3a1P08121 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.84□□□□□ -1.95
Col3a1P08121 Gm45119-201ENSMUST00000207612 199 ntBASIC2.84□□□□□ -1.95
Col3a1P08121 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC2.84□□□□□ -1.95
Col3a1P08121 Gm45704-201ENSMUST00000212582 403 ntBASIC2.84□□□□□ -1.95
Col3a1P08121 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.84□□□□□ -1.95
Col3a1P08121 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.84□□□□□ -1.95
Col3a1P08121 Gm22806-201ENSMUST00000082738 136 ntBASIC2.84□□□□□ -1.95
Col3a1P08121 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC2.84□□□□□ -1.95
Col3a1P08121 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Col3a1P08121 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
Col3a1P08121 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
Col3a1P08121 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
Col3a1P08121 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
Col3a1P08121 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC2.84□□□□□ -1.96
Col3a1P08121 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
Col3a1P08121 Gm15148-201ENSMUST00000117602 156 ntBASIC2.84□□□□□ -1.96
Col3a1P08121 Gm13355-201ENSMUST00000117996 317 ntBASIC2.84□□□□□ -1.96
Col3a1P08121 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC2.84□□□□□ -1.96
Col3a1P08121 Gm25606-201ENSMUST00000158363 95 ntBASIC2.84□□□□□ -1.96
Col3a1P08121 Gm24546-201ENSMUST00000158652 102 ntBASIC2.84□□□□□ -1.96
Col3a1P08121 Gm5263-201ENSMUST00000163646 601 ntBASIC2.84□□□□□ -1.96
Col3a1P08121 Gm26400-201ENSMUST00000175012 85 ntBASIC2.84□□□□□ -1.96
Col3a1P08121 Mup-ps11-201ENSMUST00000178040 545 ntBASIC2.84□□□□□ -1.96
Col3a1P08121 Mup-ps3-201ENSMUST00000178315 545 ntBASIC2.84□□□□□ -1.96
Col3a1P08121 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
Col3a1P08121 Gm24713-201ENSMUST00000178850 107 ntBASIC2.84□□□□□ -1.96
Col3a1P08121 Gm22259-201ENSMUST00000178926 107 ntBASIC2.84□□□□□ -1.96
Col3a1P08121 Gm25448-201ENSMUST00000180065 107 ntBASIC2.84□□□□□ -1.96
Col3a1P08121 Mir6355-201ENSMUST00000183687 106 ntBASIC2.84□□□□□ -1.96
Col3a1P08121 Gm28399-201ENSMUST00000186221 318 ntBASIC2.84□□□□□ -1.96
Col3a1P08121 Gm28572-201ENSMUST00000187444 318 ntBASIC2.84□□□□□ -1.96
Col3a1P08121 Gm29365-201ENSMUST00000189461 699 ntBASIC2.84□□□□□ -1.96
Col3a1P08121 Gm37817-201ENSMUST00000195276 434 ntBASIC2.84□□□□□ -1.96
Col3a1P08121 Gm44059-201ENSMUST00000204048 351 ntBASIC2.84□□□□□ -1.96
Col3a1P08121 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
Col3a1P08121 AC124346.1-201ENSMUST00000218539 364 ntBASIC2.84□□□□□ -1.96
Col3a1P08121 AC165157.3-201ENSMUST00000220815 103 ntBASIC2.84□□□□□ -1.96
Col3a1P08121 CT009718.4-201ENSMUST00000221881 109 ntBASIC2.84□□□□□ -1.96
Col3a1P08121 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
Col3a1P08121 Mir322-201ENSMUST00000083484 95 ntBASIC2.84□□□□□ -1.96
Col3a1P08121 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC2.83□□□□□ -1.96
Col3a1P08121 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC2.83□□□□□ -1.96
Col3a1P08121 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.83□□□□□ -1.96
Col3a1P08121 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Col3a1P08121 Gm23063-201ENSMUST00000102350 93 ntBASIC2.83□□□□□ -1.96
Col3a1P08121 Mir875-201ENSMUST00000104698 78 ntBASIC2.83□□□□□ -1.96
Col3a1P08121 Gm14559-201ENSMUST00000121745 496 ntBASIC2.83□□□□□ -1.96
Col3a1P08121 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms