Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Cbx4O55187 Gm37281-201ENSMUST00000192412 439 ntBASIC2.78□□□□□ -1.96
Cbx4O55187 Gm18000-201ENSMUST00000212153 800 ntBASIC2.78□□□□□ -1.96
Cbx4O55187 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
Cbx4O55187 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.78□□□□□ -1.96
Cbx4O55187 AC170600.1-201ENSMUST00000228763 277 ntBASIC2.78□□□□□ -1.96
Cbx4O55187 Gm23406-201ENSMUST00000082537 122 ntBASIC2.78□□□□□ -1.96
Cbx4O55187 Gm22997-201ENSMUST00000082845 107 ntBASIC2.78□□□□□ -1.96
Cbx4O55187 Gm23727-201ENSMUST00000083352 164 ntBASIC2.78□□□□□ -1.96
Cbx4O55187 Snord14d-201ENSMUST00000083424 86 ntBASIC2.78□□□□□ -1.96
Cbx4O55187 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.78□□□□□ -1.96
Cbx4O55187 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
Cbx4O55187 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Cbx4O55187 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Cbx4O55187 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.78□□□□□ -1.96
Cbx4O55187 AC122887.2-201ENSMUST00000219465 1603 ntBASIC2.78□□□□□ -1.96
Cbx4O55187 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Cbx4O55187 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Cbx4O55187 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.78□□□□□ -1.97
Cbx4O55187 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.78□□□□□ -1.97
Cbx4O55187 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Cbx4O55187 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Cbx4O55187 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
Cbx4O55187 Snord14c-201ENSMUST00000101927 86 ntBASIC2.77□□□□□ -1.97
Cbx4O55187 Gm25466-201ENSMUST00000103995 132 ntBASIC2.77□□□□□ -1.97
Cbx4O55187 Gm14020-201ENSMUST00000118165 662 ntBASIC2.77□□□□□ -1.97
Cbx4O55187 Gm15466-201ENSMUST00000122299 333 ntBASIC2.77□□□□□ -1.97
Cbx4O55187 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Cbx4O55187 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC2.77□□□□□ -1.97
Cbx4O55187 Gm22598-201ENSMUST00000157600 127 ntBASIC2.77□□□□□ -1.97
Cbx4O55187 Gm22654-201ENSMUST00000157874 105 ntBASIC2.77□□□□□ -1.97
Cbx4O55187 Gm7582-201ENSMUST00000160831 603 ntBASIC2.77□□□□□ -1.97
Cbx4O55187 Gm24618-201ENSMUST00000177718 94 ntBASIC2.77□□□□□ -1.97
Cbx4O55187 Gm23953-201ENSMUST00000178214 94 ntBASIC2.77□□□□□ -1.97
Cbx4O55187 Gm26332-201ENSMUST00000179813 94 ntBASIC2.77□□□□□ -1.97
Cbx4O55187 Gm22863-201ENSMUST00000180265 94 ntBASIC2.77□□□□□ -1.97
Cbx4O55187 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2.77□□□□□ -1.97
Cbx4O55187 Gm29397-201ENSMUST00000185205 333 ntBASIC2.77□□□□□ -1.97
Cbx4O55187 Gm28058-201ENSMUST00000186421 264 ntBASIC2.77□□□□□ -1.97
Cbx4O55187 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Cbx4O55187 Gm28288-201ENSMUST00000191019 214 ntBASIC2.77□□□□□ -1.97
Cbx4O55187 Gm37338-201ENSMUST00000191986 127 ntBASIC2.77□□□□□ -1.97
Cbx4O55187 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.77□□□□□ -1.97
Cbx4O55187 Gm44989-201ENSMUST00000204749 217 ntBASIC2.77□□□□□ -1.97
Cbx4O55187 Gm45395-201ENSMUST00000209891 559 ntBASIC2.77□□□□□ -1.97
Cbx4O55187 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.77□□□□□ -1.97
Cbx4O55187 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.77□□□□□ -1.97
Cbx4O55187 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.77□□□□□ -1.97
Cbx4O55187 Gm22620-201ENSMUST00000082700 133 ntBASIC2.77□□□□□ -1.97
Cbx4O55187 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
Cbx4O55187 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.77□□□□□ -1.97
Cbx4O55187 Gm15101-201ENSMUST00000178818 1502 ntBASIC2.77□□□□□ -1.97
Cbx4O55187 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.77□□□□□ -1.97
Cbx4O55187 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.77□□□□□ -1.97
Cbx4O55187 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Cbx4O55187 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Cbx4O55187 Gm11862-201ENSMUST00000119678 659 ntBASIC2.76□□□□□ -1.97
Cbx4O55187 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.76□□□□□ -1.97
Cbx4O55187 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
Cbx4O55187 Gm23586-201ENSMUST00000157657 123 ntBASIC2.76□□□□□ -1.97
Cbx4O55187 Gm24005-201ENSMUST00000158459 296 ntBASIC2.76□□□□□ -1.97
Cbx4O55187 Snord93-201ENSMUST00000175580 71 ntBASIC2.76□□□□□ -1.97
Cbx4O55187 Gm22131-201ENSMUST00000178415 94 ntBASIC2.76□□□□□ -1.97
Cbx4O55187 Gm27527-201ENSMUST00000183903 99 ntBASIC2.76□□□□□ -1.97
Cbx4O55187 Gm27698-201ENSMUST00000184060 249 ntBASIC2.76□□□□□ -1.97
Cbx4O55187 Gm20923-201ENSMUST00000190009 319 ntBASIC2.76□□□□□ -1.97
Cbx4O55187 Gm21088-201ENSMUST00000190875 316 ntBASIC2.76□□□□□ -1.97
Cbx4O55187 Trav5d-2-201ENSMUST00000196107 275 ntBASIC2.76□□□□□ -1.97
Cbx4O55187 Gm43355-201ENSMUST00000196541 346 ntBASIC2.76□□□□□ -1.97
Cbx4O55187 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.76□□□□□ -1.97
Cbx4O55187 Trav5n-2-201ENSMUST00000197136 275 ntBASIC2.76□□□□□ -1.97
Cbx4O55187 Gm32222-201ENSMUST00000203296 298 ntBASIC2.76□□□□□ -1.97
Cbx4O55187 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.76□□□□□ -1.97
Cbx4O55187 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.76□□□□□ -1.97
Cbx4O55187 AC122225.1-201ENSMUST00000215641 369 ntBASIC2.76□□□□□ -1.97
Cbx4O55187 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.76□□□□□ -1.97
Cbx4O55187 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.76□□□□□ -1.97
Cbx4O55187 Gm23041-201ENSMUST00000083868 106 ntBASIC2.76□□□□□ -1.97
Cbx4O55187 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC2.76□□□□□ -1.97
Cbx4O55187 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC2.76□□□□□ -1.97
Cbx4O55187 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Cbx4O55187 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.76□□□□□ -1.97
Cbx4O55187 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Cbx4O55187 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
Cbx4O55187 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.75□□□□□ -1.97
Cbx4O55187 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Cbx4O55187 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.75□□□□□ -1.97
Cbx4O55187 Gm23911-201ENSMUST00000104596 134 ntBASIC2.75□□□□□ -1.97
Cbx4O55187 Gm11253-201ENSMUST00000118486 201 ntBASIC2.75□□□□□ -1.97
Cbx4O55187 Gm11935-201ENSMUST00000118608 399 ntBASIC2.75□□□□□ -1.97
Cbx4O55187 Gm15272-201ENSMUST00000120865 233 ntBASIC2.75□□□□□ -1.97
Cbx4O55187 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC2.75□□□□□ -1.97
Cbx4O55187 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.75□□□□□ -1.97
Cbx4O55187 Gm25384-201ENSMUST00000157807 105 ntBASIC2.75□□□□□ -1.97
Cbx4O55187 Gm9830-201ENSMUST00000178509 357 ntBASIC2.75□□□□□ -1.97
Cbx4O55187 Gm22448-201ENSMUST00000179254 107 ntBASIC2.75□□□□□ -1.97
Cbx4O55187 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.75□□□□□ -1.97
Cbx4O55187 Gm18341-201ENSMUST00000197538 622 ntBASIC2.75□□□□□ -1.97
Cbx4O55187 Mir7227-201ENSMUST00000200408 59 ntBASIC2.75□□□□□ -1.97
Cbx4O55187 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.75□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 100.7 ms