Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Gm28717-201ENSMUST00000189950 315 ntBASIC2.73□□□□□ -1.97
Clk3O35492 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.73□□□□□ -1.97
Clk3O35492 Gm43510-201ENSMUST00000197922 353 ntBASIC2.73□□□□□ -1.97
Clk3O35492 Gm42739-201ENSMUST00000200687 226 ntBASIC2.73□□□□□ -1.97
Clk3O35492 Gm44811-201ENSMUST00000209120 228 ntBASIC2.73□□□□□ -1.97
Clk3O35492 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.73□□□□□ -1.97
Clk3O35492 Gm45678-201ENSMUST00000210509 295 ntBASIC2.73□□□□□ -1.97
Clk3O35492 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.73□□□□□ -1.97
Clk3O35492 Gm4945-201ENSMUST00000075152 453 ntBASIC2.73□□□□□ -1.97
Clk3O35492 Gm23247-201ENSMUST00000083373 107 ntBASIC2.73□□□□□ -1.97
Clk3O35492 Gm23345-201ENSMUST00000083817 150 ntBASIC2.73□□□□□ -1.97
Clk3O35492 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Clk3O35492 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Clk3O35492 Gm24338-201ENSMUST00000104205 127 ntBASIC2.72□□□□□ -1.97
Clk3O35492 Gm14073-201ENSMUST00000117344 381 ntBASIC2.72□□□□□ -1.97
Clk3O35492 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC2.72□□□□□ -1.97
Clk3O35492 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.72□□□□□ -1.97
Clk3O35492 Gm23895-201ENSMUST00000158108 160 ntBASIC2.72□□□□□ -1.97
Clk3O35492 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Clk3O35492 Gm20462-201ENSMUST00000172623 408 ntBASIC2.72□□□□□ -1.97
Clk3O35492 Gm24084-201ENSMUST00000175173 137 ntBASIC2.72□□□□□ -1.97
Clk3O35492 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC2.72□□□□□ -1.97
Clk3O35492 Gm32033-201ENSMUST00000193483 339 ntBASIC2.72□□□□□ -1.97
Clk3O35492 Trav5d-2-201ENSMUST00000196107 275 ntBASIC2.72□□□□□ -1.97
Clk3O35492 Trav5n-2-201ENSMUST00000197136 275 ntBASIC2.72□□□□□ -1.97
Clk3O35492 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.72□□□□□ -1.97
Clk3O35492 Gm44468-201ENSMUST00000199516 105 ntBASIC2.72□□□□□ -1.97
Clk3O35492 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC2.72□□□□□ -1.97
Clk3O35492 Gm45288-201ENSMUST00000210236 151 ntBASIC2.72□□□□□ -1.97
Clk3O35492 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC2.72□□□□□ -1.97
Clk3O35492 AC132437.1-201ENSMUST00000218308 320 ntBASIC2.72□□□□□ -1.97
Clk3O35492 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.72□□□□□ -1.97
Clk3O35492 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.72□□□□□ -1.97
Clk3O35492 Snord68-201ENSMUST00000082516 86 ntBASIC2.72□□□□□ -1.97
Clk3O35492 Mir193a-201ENSMUST00000083461 66 ntBASIC2.72□□□□□ -1.97
Clk3O35492 Gm25937-201ENSMUST00000083912 107 ntBASIC2.72□□□□□ -1.97
Clk3O35492 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.72□□□□□ -1.97
Clk3O35492 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.72□□□□□ -1.97
Clk3O35492 Gm15098-201ENSMUST00000119036 1508 ntBASIC2.72□□□□□ -1.97
Clk3O35492 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.71□□□□□ -1.97
Clk3O35492 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Clk3O35492 Gm24582-201ENSMUST00000103967 103 ntBASIC2.71□□□□□ -1.98
Clk3O35492 Gm22270-201ENSMUST00000104034 132 ntBASIC2.71□□□□□ -1.98
Clk3O35492 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.71□□□□□ -1.98
Clk3O35492 Gm6956-201ENSMUST00000134724 546 ntBASIC2.71□□□□□ -1.98
Clk3O35492 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.71□□□□□ -1.98
Clk3O35492 Gm24601-201ENSMUST00000157970 143 ntBASIC2.71□□□□□ -1.98
Clk3O35492 Gm24878-201ENSMUST00000158782 104 ntBASIC2.71□□□□□ -1.98
Clk3O35492 Mir5123-201ENSMUST00000177794 83 ntBASIC2.71□□□□□ -1.98
Clk3O35492 Gm27700-201ENSMUST00000185003 81 ntBASIC2.71□□□□□ -1.98
Clk3O35492 Gm43669-201ENSMUST00000198229 436 ntBASIC2.71□□□□□ -1.98
Clk3O35492 Gm7065-201ENSMUST00000222150 474 ntBASIC2.71□□□□□ -1.98
Clk3O35492 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.71□□□□□ -1.98
Clk3O35492 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Clk3O35492 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Clk3O35492 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.7□□□□□ -1.98
Clk3O35492 Gm9059-201ENSMUST00000118319 183 ntBASIC2.7□□□□□ -1.98
Clk3O35492 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.7□□□□□ -1.98
Clk3O35492 Gm26102-201ENSMUST00000157251 284 ntBASIC2.7□□□□□ -1.98
Clk3O35492 Gm23409-201ENSMUST00000158516 237 ntBASIC2.7□□□□□ -1.98
Clk3O35492 Gm22308-201ENSMUST00000177609 107 ntBASIC2.7□□□□□ -1.98
Clk3O35492 Gm27330-201ENSMUST00000184689 132 ntBASIC2.7□□□□□ -1.98
Clk3O35492 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Clk3O35492 Gm43521-201ENSMUST00000197838 255 ntBASIC2.7□□□□□ -1.98
Clk3O35492 Gm43107-201ENSMUST00000198729 255 ntBASIC2.7□□□□□ -1.98
Clk3O35492 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.7□□□□□ -1.98
Clk3O35492 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.7□□□□□ -1.98
Clk3O35492 Gm44399-201ENSMUST00000205043 226 ntBASIC2.7□□□□□ -1.98
Clk3O35492 Gm44654-201ENSMUST00000208052 329 ntBASIC2.7□□□□□ -1.98
Clk3O35492 AC138290.2-201ENSMUST00000218822 369 ntBASIC2.7□□□□□ -1.98
Clk3O35492 AC166341.3-201ENSMUST00000221861 114 ntBASIC2.7□□□□□ -1.98
Clk3O35492 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.7□□□□□ -1.98
Clk3O35492 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.7□□□□□ -1.98
Clk3O35492 Gm22997-201ENSMUST00000082845 107 ntBASIC2.7□□□□□ -1.98
Clk3O35492 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Clk3O35492 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.7□□□□□ -1.98
Clk3O35492 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.7□□□□□ -1.98
Clk3O35492 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Clk3O35492 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Clk3O35492 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.69□□□□□ -1.98
Clk3O35492 Gm11859-201ENSMUST00000118099 455 ntBASIC2.69□□□□□ -1.98
Clk3O35492 Gm13518-201ENSMUST00000120018 233 ntBASIC2.69□□□□□ -1.98
Clk3O35492 Gm12897-201ENSMUST00000120341 250 ntBASIC2.69□□□□□ -1.98
Clk3O35492 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC2.69□□□□□ -1.98
Clk3O35492 Gm23588-201ENSMUST00000157659 99 ntBASIC2.69□□□□□ -1.98
Clk3O35492 Gm22843-201ENSMUST00000157710 134 ntBASIC2.69□□□□□ -1.98
Clk3O35492 Gm26400-201ENSMUST00000175012 85 ntBASIC2.69□□□□□ -1.98
Clk3O35492 Gm27905-201ENSMUST00000184005 207 ntBASIC2.69□□□□□ -1.98
Clk3O35492 Gm43680-201ENSMUST00000199466 340 ntBASIC2.69□□□□□ -1.98
Clk3O35492 Gm43991-201ENSMUST00000203751 274 ntBASIC2.69□□□□□ -1.98
Clk3O35492 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.69□□□□□ -1.98
Clk3O35492 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.69□□□□□ -1.98
Clk3O35492 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.69□□□□□ -1.98
Clk3O35492 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Clk3O35492 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.68□□□□□ -1.98
Clk3O35492 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
Clk3O35492 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.68□□□□□ -1.98
Clk3O35492 Gm24126-201ENSMUST00000104111 106 ntBASIC2.68□□□□□ -1.98
Clk3O35492 Gm14973-201ENSMUST00000117248 255 ntBASIC2.68□□□□□ -1.98
Clk3O35492 Gm15211-201ENSMUST00000118932 528 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms