Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Gm6660-201ENSMUST00000179149 468 ntBASIC3.22□□□□□ -1.89
Ptchd4B9EKX1 Gm27532-201ENSMUST00000183726 113 ntBASIC3.22□□□□□ -1.89
Ptchd4B9EKX1 Gm27921-201ENSMUST00000183968 108 ntBASIC3.22□□□□□ -1.89
Ptchd4B9EKX1 Mir6917-201ENSMUST00000184111 61 ntBASIC3.22□□□□□ -1.89
Ptchd4B9EKX1 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Ptchd4B9EKX1 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.22□□□□□ -1.89
Ptchd4B9EKX1 Gm19177-201ENSMUST00000204520 613 ntBASIC3.22□□□□□ -1.89
Ptchd4B9EKX1 Gm44223-201ENSMUST00000204854 114 ntBASIC3.22□□□□□ -1.89
Ptchd4B9EKX1 Gm45005-201ENSMUST00000206640 157 ntBASIC3.22□□□□□ -1.89
Ptchd4B9EKX1 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.22□□□□□ -1.89
Ptchd4B9EKX1 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.22□□□□□ -1.89
Ptchd4B9EKX1 Gm42755-201ENSMUST00000198533 1493 ntBASIC3.22□□□□□ -1.89
Ptchd4B9EKX1 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Ptchd4B9EKX1 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Ptchd4B9EKX1 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.21□□□□□ -1.9
Ptchd4B9EKX1 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Ptchd4B9EKX1 Gm12647-201ENSMUST00000118977 265 ntBASIC3.21□□□□□ -1.9
Ptchd4B9EKX1 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ptchd4B9EKX1 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.21□□□□□ -1.9
Ptchd4B9EKX1 Gm22141-201ENSMUST00000157403 277 ntBASIC3.21□□□□□ -1.9
Ptchd4B9EKX1 Gm22114-201ENSMUST00000177756 107 ntBASIC3.21□□□□□ -1.9
Ptchd4B9EKX1 Mir5123-201ENSMUST00000177794 83 ntBASIC3.21□□□□□ -1.9
Ptchd4B9EKX1 Gm24487-201ENSMUST00000178017 63 ntBASIC3.21□□□□□ -1.9
Ptchd4B9EKX1 Gm37162-201ENSMUST00000191708 551 ntBASIC3.21□□□□□ -1.9
Ptchd4B9EKX1 Gm43510-201ENSMUST00000197922 353 ntBASIC3.21□□□□□ -1.9
Ptchd4B9EKX1 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.21□□□□□ -1.9
Ptchd4B9EKX1 AC165106.2-201ENSMUST00000226749 97 ntBASIC3.21□□□□□ -1.9
Ptchd4B9EKX1 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.21□□□□□ -1.9
Ptchd4B9EKX1 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 Gm24084-201ENSMUST00000175173 137 ntBASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 Gm23921-201ENSMUST00000175258 107 ntBASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 Gm29147-201ENSMUST00000186846 315 ntBASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 Gm29227-201ENSMUST00000187139 315 ntBASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 Gm29034-201ENSMUST00000188099 315 ntBASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 Gm28160-201ENSMUST00000191229 315 ntBASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 Gm37129-201ENSMUST00000195791 315 ntBASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 Gm23370-202ENSMUST00000197008 129 ntBASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 Gm9377-201ENSMUST00000207227 623 ntBASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 Gm18000-201ENSMUST00000212153 800 ntBASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 AC158622.1-201ENSMUST00000217107 230 ntBASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 Gm22620-201ENSMUST00000082700 133 ntBASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 Snord14d-201ENSMUST00000083424 86 ntBASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 Gm24522-201ENSMUST00000083964 108 ntBASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ptchd4B9EKX1 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.19□□□□□ -1.9
Ptchd4B9EKX1 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.19□□□□□ -1.9
Ptchd4B9EKX1 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Ptchd4B9EKX1 Gm15714-201ENSMUST00000117168 250 ntBASIC3.19□□□□□ -1.9
Ptchd4B9EKX1 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.19□□□□□ -1.9
Ptchd4B9EKX1 Gm23759-201ENSMUST00000158351 268 ntBASIC3.19□□□□□ -1.9
Ptchd4B9EKX1 Gm24501-201ENSMUST00000158452 62 ntBASIC3.19□□□□□ -1.9
Ptchd4B9EKX1 Gm27505-201ENSMUST00000185071 110 ntBASIC3.19□□□□□ -1.9
Ptchd4B9EKX1 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC3.19□□□□□ -1.9
Ptchd4B9EKX1 Gm28155-201ENSMUST00000191066 151 ntBASIC3.19□□□□□ -1.9
Ptchd4B9EKX1 Trav5d-2-201ENSMUST00000196107 275 ntBASIC3.19□□□□□ -1.9
Ptchd4B9EKX1 Trav5n-2-201ENSMUST00000197136 275 ntBASIC3.19□□□□□ -1.9
Ptchd4B9EKX1 Gm43286-201ENSMUST00000197420 424 ntBASIC3.19□□□□□ -1.9
Ptchd4B9EKX1 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC3.19□□□□□ -1.9
Ptchd4B9EKX1 Gm44055-201ENSMUST00000204376 247 ntBASIC3.19□□□□□ -1.9
Ptchd4B9EKX1 Gm44157-201ENSMUST00000204720 410 ntBASIC3.19□□□□□ -1.9
Ptchd4B9EKX1 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC3.19□□□□□ -1.9
Ptchd4B9EKX1 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC3.19□□□□□ -1.9
Ptchd4B9EKX1 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.19□□□□□ -1.9
Ptchd4B9EKX1 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.19□□□□□ -1.9
Ptchd4B9EKX1 Gm23055-201ENSMUST00000082805 94 ntBASIC3.19□□□□□ -1.9
Ptchd4B9EKX1 AC160115.1-201ENSMUST00000224678 1574 ntBASIC3.19□□□□□ -1.9
Ptchd4B9EKX1 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Ptchd4B9EKX1 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.19□□□□□ -1.9
Ptchd4B9EKX1 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Ptchd4B9EKX1 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ptchd4B9EKX1 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ptchd4B9EKX1 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Ptchd4B9EKX1 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.18□□□□□ -1.9
Ptchd4B9EKX1 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ptchd4B9EKX1 Gm7853-201ENSMUST00000100708 478 ntBASIC3.18□□□□□ -1.9
Ptchd4B9EKX1 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ptchd4B9EKX1 Gm24068-201ENSMUST00000104513 132 ntBASIC3.18□□□□□ -1.9
Ptchd4B9EKX1 Gm11388-201ENSMUST00000120908 159 ntBASIC3.18□□□□□ -1.9
Ptchd4B9EKX1 Gm13725-201ENSMUST00000122139 207 ntBASIC3.18□□□□□ -1.9
Ptchd4B9EKX1 Gm17166-201ENSMUST00000172006 431 ntBASIC3.18□□□□□ -1.9
Ptchd4B9EKX1 Gm26928-201ENSMUST00000182674 572 ntBASIC3.18□□□□□ -1.9
Ptchd4B9EKX1 Gm28257-201ENSMUST00000185244 463 ntBASIC3.18□□□□□ -1.9
Ptchd4B9EKX1 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.18□□□□□ -1.9
Ptchd4B9EKX1 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.18□□□□□ -1.9
Ptchd4B9EKX1 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ptchd4B9EKX1 Gm44960-201ENSMUST00000207403 141 ntBASIC3.18□□□□□ -1.9
Ptchd4B9EKX1 AC122225.1-201ENSMUST00000215641 369 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 138.5 ms