Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Ccdc9bA3KGF9 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Ccdc9bA3KGF9 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Ccdc9bA3KGF9 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 Gm24263-201ENSMUST00000104059 107 ntBASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 Gm26019-201ENSMUST00000104407 119 ntBASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 Gm12173-201ENSMUST00000117622 273 ntBASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 Gm26276-201ENSMUST00000157099 109 ntBASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 Gm26036-201ENSMUST00000158149 144 ntBASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 Gm24314-201ENSMUST00000158274 123 ntBASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 Gm22156-201ENSMUST00000158409 141 ntBASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 Gm26460-201ENSMUST00000175061 126 ntBASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 Gm25198-201ENSMUST00000178574 110 ntBASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 Gm37791-201ENSMUST00000195081 286 ntBASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 Gm43730-201ENSMUST00000199863 372 ntBASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 AC150901.1-201ENSMUST00000208407 145 ntBASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 Gm18991-201ENSMUST00000209225 746 ntBASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 Gm22828-201ENSMUST00000083768 107 ntBASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 Gm37011-201ENSMUST00000195543 2935 ntBASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.68□□□□□ -1.82
Ccdc9bA3KGF9 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc9bA3KGF9 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Ccdc9bA3KGF9 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ccdc9bA3KGF9 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc9bA3KGF9 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc9bA3KGF9 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.67□□□□□ -1.82
Ccdc9bA3KGF9 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC3.67□□□□□ -1.82
Ccdc9bA3KGF9 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc9bA3KGF9 Gm23175-201ENSMUST00000104371 132 ntBASIC3.67□□□□□ -1.82
Ccdc9bA3KGF9 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Ccdc9bA3KGF9 Gm13314-201ENSMUST00000118742 335 ntBASIC3.67□□□□□ -1.82
Ccdc9bA3KGF9 Gm13797-201ENSMUST00000121792 120 ntBASIC3.67□□□□□ -1.82
Ccdc9bA3KGF9 Gm13868-201ENSMUST00000122411 294 ntBASIC3.67□□□□□ -1.82
Ccdc9bA3KGF9 Gm22606-201ENSMUST00000158290 103 ntBASIC3.67□□□□□ -1.82
Ccdc9bA3KGF9 Mir1251-201ENSMUST00000175486 84 ntBASIC3.67□□□□□ -1.82
Ccdc9bA3KGF9 Gm23215-201ENSMUST00000178153 121 ntBASIC3.67□□□□□ -1.82
Ccdc9bA3KGF9 Gm29452-201ENSMUST00000187996 313 ntBASIC3.67□□□□□ -1.82
Ccdc9bA3KGF9 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3.67□□□□□ -1.82
Ccdc9bA3KGF9 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC3.67□□□□□ -1.82
Ccdc9bA3KGF9 Gm22299-201ENSMUST00000082663 136 ntBASIC3.67□□□□□ -1.82
Ccdc9bA3KGF9 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.67□□□□□ -1.82
Ccdc9bA3KGF9 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc9bA3KGF9 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ccdc9bA3KGF9 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ccdc9bA3KGF9 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Gm25764-201ENSMUST00000104092 134 ntBASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Gm12252-201ENSMUST00000119517 219 ntBASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Gm14687-201ENSMUST00000120206 363 ntBASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Gm14069-201ENSMUST00000120815 229 ntBASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Gm24898-201ENSMUST00000158133 106 ntBASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Mir5136-201ENSMUST00000175573 76 ntBASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Gm16404-201ENSMUST00000177739 468 ntBASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Gm14598-201ENSMUST00000180109 468 ntBASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Gm14625-201ENSMUST00000180231 468 ntBASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Gm29005-201ENSMUST00000186773 320 ntBASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Gm29408-201ENSMUST00000187536 216 ntBASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Gm28924-201ENSMUST00000190012 241 ntBASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Gm28314-201ENSMUST00000191276 345 ntBASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 CU062626.2-201ENSMUST00000223953 274 ntBASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Gm25856-201ENSMUST00000082786 75 ntBASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Gm24762-201ENSMUST00000083689 104 ntBASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Gm23850-201ENSMUST00000083830 169 ntBASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 n-R5s151-201ENSMUST00000083959 119 ntBASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc9bA3KGF9 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.65□□□□□ -1.82
Ccdc9bA3KGF9 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Ccdc9bA3KGF9 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
Ccdc9bA3KGF9 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Ccdc9bA3KGF9 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.82
Ccdc9bA3KGF9 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Ccdc9bA3KGF9 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
Ccdc9bA3KGF9 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Ccdc9bA3KGF9 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.65□□□□□ -1.83
Ccdc9bA3KGF9 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Ccdc9bA3KGF9 Gm24601-201ENSMUST00000157970 143 ntBASIC3.65□□□□□ -1.83
Ccdc9bA3KGF9 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC3.65□□□□□ -1.83
Ccdc9bA3KGF9 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms