Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm20058-201ENSMUST00000186939 284 ntBASIC1.63□□□□□ -2.15
Scn1aA2APX8 Gm28404-201ENSMUST00000190242 453 ntBASIC1.63□□□□□ -2.15
Scn1aA2APX8 Gm37449-201ENSMUST00000193016 270 ntBASIC1.63□□□□□ -2.15
Scn1aA2APX8 Gm18658-201ENSMUST00000195558 270 ntBASIC1.63□□□□□ -2.15
Scn1aA2APX8 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Scn1aA2APX8 Mir208a-201ENSMUST00000083498 83 ntBASIC1.63□□□□□ -2.15
Scn1aA2APX8 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Scn1aA2APX8 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC1.62□□□□□ -2.15
Scn1aA2APX8 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC1.62□□□□□ -2.15
Scn1aA2APX8 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC1.62□□□□□ -2.15
Scn1aA2APX8 Gm12393-201ENSMUST00000117084 848 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 Gm11410-201ENSMUST00000120053 1143 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 Gm11835-201ENSMUST00000120635 663 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 Gm12872-201ENSMUST00000121835 320 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 Gm25279-201ENSMUST00000122608 133 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC1.62□□□□□ -2.15
Scn1aA2APX8 Gm24813-201ENSMUST00000175310 84 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 Mir6351-201ENSMUST00000183826 99 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 Gm38238-201ENSMUST00000194334 346 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 Gm44142-201ENSMUST00000203358 311 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 Gm19032-201ENSMUST00000208584 592 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC1.62□□□□□ -2.15
Scn1aA2APX8 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Scn1aA2APX8 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Scn1aA2APX8 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC1.62□□□□□ -2.15
Scn1aA2APX8 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.62□□□□□ -2.15
Scn1aA2APX8 AC167192.1-201ENSMUST00000225908 139 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC1.62□□□□□ -2.15
Scn1aA2APX8 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Scn1aA2APX8 Gm3563-201ENSMUST00000172963 1628 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 Gm22771-201ENSMUST00000104449 91 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 n-R5s202-201ENSMUST00000104517 114 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 Gm22151-201ENSMUST00000116963 58 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 Gm22843-201ENSMUST00000157710 134 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 Gm24997-201ENSMUST00000157910 105 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 Gm23144-201ENSMUST00000180226 107 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
Scn1aA2APX8 Gm19066-201ENSMUST00000193232 1078 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 Gm43007-201ENSMUST00000197618 291 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 AC156790.3-201ENSMUST00000226200 254 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Scn1aA2APX8 Gm26327-201ENSMUST00000093724 111 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Scn1aA2APX8 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.62□□□□□ -2.15
Scn1aA2APX8 AC124426.1-203ENSMUST00000221814 1362 ntBASIC1.62□□□□□ -2.15
Scn1aA2APX8 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
Scn1aA2APX8 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC1.61□□□□□ -2.15
Scn1aA2APX8 Gm14882-201ENSMUST00000117216 218 ntBASIC1.61□□□□□ -2.15
Scn1aA2APX8 Gm13903-201ENSMUST00000120945 193 ntBASIC1.61□□□□□ -2.15
Scn1aA2APX8 Gm5396-201ENSMUST00000121222 532 ntBASIC1.61□□□□□ -2.15
Scn1aA2APX8 Gm14362-201ENSMUST00000121679 273 ntBASIC1.61□□□□□ -2.15
Scn1aA2APX8 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.61□□□□□ -2.15
Scn1aA2APX8 Gm15254-201ENSMUST00000149567 273 ntBASIC1.61□□□□□ -2.15
Scn1aA2APX8 Gm25831-201ENSMUST00000158924 163 ntBASIC1.61□□□□□ -2.15
Scn1aA2APX8 Gm17062-201ENSMUST00000166987 461 ntBASIC1.61□□□□□ -2.15
Scn1aA2APX8 Gm5329-201ENSMUST00000186898 463 ntBASIC1.61□□□□□ -2.15
Scn1aA2APX8 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC1.61□□□□□ -2.15
Scn1aA2APX8 Gm25820-201ENSMUST00000198589 127 ntBASIC1.61□□□□□ -2.15
Scn1aA2APX8 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC1.61□□□□□ -2.15
Scn1aA2APX8 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.61□□□□□ -2.15
Scn1aA2APX8 AC069561.2-201ENSMUST00000217596 420 ntBASIC1.61□□□□□ -2.15
Scn1aA2APX8 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.61□□□□□ -2.15
Scn1aA2APX8 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.61□□□□□ -2.15
Scn1aA2APX8 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
Scn1aA2APX8 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Scn1aA2APX8 Gm22508-201ENSMUST00000082772 110 ntBASIC1.61□□□□□ -2.15
Scn1aA2APX8 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Scn1aA2APX8 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Scn1aA2APX8 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC1.61□□□□□ -2.15
Scn1aA2APX8 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.61□□□□□ -2.15
Scn1aA2APX8 Gm24839-201ENSMUST00000122602 107 ntBASIC1.61□□□□□ -2.15
Scn1aA2APX8 Gm26186-201ENSMUST00000157689 125 ntBASIC1.61□□□□□ -2.15
Scn1aA2APX8 Gm22389-201ENSMUST00000158193 301 ntBASIC1.61□□□□□ -2.15
Scn1aA2APX8 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
Scn1aA2APX8 Gm26652-202ENSMUST00000181672 475 ntBASIC1.61□□□□□ -2.15
Scn1aA2APX8 Gm18775-201ENSMUST00000190763 586 ntBASIC1.61□□□□□ -2.15
Scn1aA2APX8 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC1.61□□□□□ -2.15
Scn1aA2APX8 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Scn1aA2APX8 Gm26263-201ENSMUST00000083281 164 ntBASIC1.61□□□□□ -2.15
Scn1aA2APX8 Olfr575-201ENSMUST00000084812 957 ntBASIC1.61□□□□□ -2.15
Scn1aA2APX8 Gm36989-201ENSMUST00000193225 2160 ntBASIC1.6□□□□□ -2.15
Scn1aA2APX8 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Scn1aA2APX8 Mir669p-2-201ENSMUST00000103868 87 ntBASIC1.6□□□□□ -2.15
Scn1aA2APX8 Mir669p-1-201ENSMUST00000103884 87 ntBASIC1.6□□□□□ -2.15
Scn1aA2APX8 Gm13355-201ENSMUST00000117996 317 ntBASIC1.6□□□□□ -2.15
Scn1aA2APX8 Gm15029-201ENSMUST00000119742 199 ntBASIC1.6□□□□□ -2.15
Scn1aA2APX8 Gm12748-201ENSMUST00000120763 504 ntBASIC1.6□□□□□ -2.15
Scn1aA2APX8 Gm26256-201ENSMUST00000122499 186 ntBASIC1.6□□□□□ -2.15
Scn1aA2APX8 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.6□□□□□ -2.15
Scn1aA2APX8 Mir1942-201ENSMUST00000157274 63 ntBASIC1.6□□□□□ -2.15
Scn1aA2APX8 Gm23713-201ENSMUST00000157353 70 ntBASIC1.6□□□□□ -2.15
Scn1aA2APX8 Gm22615-201ENSMUST00000158102 70 ntBASIC1.6□□□□□ -2.15
Scn1aA2APX8 Gm7592-201ENSMUST00000160674 627 ntBASIC1.6□□□□□ -2.15
Scn1aA2APX8 Trbv22-201ENSMUST00000191697 291 ntBASIC1.6□□□□□ -2.15
Scn1aA2APX8 Gm43513-201ENSMUST00000199779 1076 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 148.3 ms