Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Gm11363-201ENSMUST00000121672 548 ntBASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Gm12956-201ENSMUST00000122184 414 ntBASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Gm15365-201ENSMUST00000122392 300 ntBASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Gm23331-201ENSMUST00000157423 108 ntBASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Gm22731-201ENSMUST00000158086 94 ntBASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Gm22386-201ENSMUST00000158192 129 ntBASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Gm25863-201ENSMUST00000158249 329 ntBASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Gm23777-201ENSMUST00000158994 259 ntBASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Gm25035-201ENSMUST00000175414 77 ntBASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Gm22851-201ENSMUST00000178741 94 ntBASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Gm25074-201ENSMUST00000178782 94 ntBASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Gm18357-201ENSMUST00000188184 580 ntBASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Gm37727-201ENSMUST00000191637 819 ntBASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Gm8747-201ENSMUST00000195392 751 ntBASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Gm18971-201ENSMUST00000197240 374 ntBASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Gm44482-201ENSMUST00000199232 103 ntBASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Gm44881-201ENSMUST00000205425 367 ntBASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Gm2628-201ENSMUST00000218019 426 ntBASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 AC134860.6-201ENSMUST00000226038 285 ntBASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Gm22997-201ENSMUST00000082845 107 ntBASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Trav11A0A0B4J1J9 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 Gm24889-201ENSMUST00000104388 132 ntBASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 Gm24274-201ENSMUST00000116787 124 ntBASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 Gm15266-201ENSMUST00000119635 255 ntBASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 Gm13059-201ENSMUST00000119881 398 ntBASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 Gm14678-201ENSMUST00000121396 482 ntBASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 Gm22603-201ENSMUST00000157603 96 ntBASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 Gm23641-201ENSMUST00000157857 101 ntBASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 Gm23043-201ENSMUST00000157890 109 ntBASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 Gm23025-201ENSMUST00000158769 111 ntBASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 Gm24656-201ENSMUST00000177548 132 ntBASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 Gm27399-201ENSMUST00000184250 78 ntBASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 Gm19694-201ENSMUST00000192364 505 ntBASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 Gm7946-201ENSMUST00000203326 958 ntBASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 Gm17990-201ENSMUST00000211728 553 ntBASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 AC155715.1-201ENSMUST00000213575 463 ntBASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 AC116589.7-201ENSMUST00000221061 239 ntBASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 AC164117.1-201ENSMUST00000221726 239 ntBASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Trav11A0A0B4J1J9 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 Gm22591-201ENSMUST00000104243 106 ntBASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 Gm15986-201ENSMUST00000122153 400 ntBASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 Gm24598-201ENSMUST00000122510 74 ntBASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 Gm16218-201ENSMUST00000155424 388 ntBASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 Gm6182-201ENSMUST00000156439 1208 ntBASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 Gm24481-201ENSMUST00000157210 102 ntBASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 Gm22082-201ENSMUST00000157587 161 ntBASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 Gm22733-201ENSMUST00000158094 91 ntBASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 Gm7925-201ENSMUST00000166690 401 ntBASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 Gm20689-201ENSMUST00000176033 279 ntBASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 Gm25730-201ENSMUST00000178753 165 ntBASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 Gm26622-201ENSMUST00000180520 298 ntBASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 Gm37778-201ENSMUST00000191732 190 ntBASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 Gm45013-201ENSMUST00000206883 178 ntBASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 Gm44870-201ENSMUST00000207291 357 ntBASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 Gm44533-201ENSMUST00000207782 268 ntBASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 AC121844.1-201ENSMUST00000218706 137 ntBASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 AC124569.4-201ENSMUST00000223830 1220 ntBASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 Ear14-201ENSMUST00000049559 468 ntBASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 Mir193a-201ENSMUST00000083461 66 ntBASIC1.26□□□□□ -2.21
Trav11A0A0B4J1J9 Gm42770-201ENSMUST00000199657 4155 ntBASIC1.25□□□□□ -2.21
Trav11A0A0B4J1J9 Mir223-201ENSMUST00000102112 110 ntBASIC1.25□□□□□ -2.21
Trav11A0A0B4J1J9 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Trav11A0A0B4J1J9 Gm14793-201ENSMUST00000118739 311 ntBASIC1.25□□□□□ -2.21
Trav11A0A0B4J1J9 Gm13804-201ENSMUST00000119552 172 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms