Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Gm24431-201ENSMUST00000104073 66 ntBASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Gm22780-201ENSMUST00000104084 132 ntBASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 AA413626-201ENSMUST00000121125 494 ntBASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Gm23956-201ENSMUST00000157211 119 ntBASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Gm24997-201ENSMUST00000157910 105 ntBASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Gm24851-201ENSMUST00000158028 103 ntBASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Gm24076-201ENSMUST00000158179 94 ntBASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Gm22164-201ENSMUST00000158413 106 ntBASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Gm25457-201ENSMUST00000179509 107 ntBASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Gm27342-201ENSMUST00000183530 109 ntBASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Gm28995-201ENSMUST00000186625 261 ntBASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Gm19123-201ENSMUST00000190716 651 ntBASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Gm44408-201ENSMUST00000200205 66 ntBASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Gm42976-201ENSMUST00000200313 222 ntBASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Gm3333-202ENSMUST00000221763 1044 ntBASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 AC112935.1-201ENSMUST00000227603 250 ntBASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Snora41-201ENSMUST00000082668 132 ntBASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Gm23517-201ENSMUST00000082830 192 ntBASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Gm37061-201ENSMUST00000195066 3243 ntBASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
Trbv16A0A0B4J1H3 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm12370-201ENSMUST00000117809 604 ntBASIC0.71□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm22664-201ENSMUST00000158719 105 ntBASIC0.71□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm17377-201ENSMUST00000165184 207 ntBASIC0.71□□□□□ -2.3
Trbv16A0A0B4J1H3 Mir3098-201ENSMUST00000175416 87 ntBASIC0.71□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm29513-201ENSMUST00000185741 202 ntBASIC0.71□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm38274-201ENSMUST00000195689 148 ntBASIC0.71□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm44482-201ENSMUST00000199232 103 ntBASIC0.71□□□□□ -2.3
Trbv16A0A0B4J1H3 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC0.71□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm45456-201ENSMUST00000210841 243 ntBASIC0.71□□□□□ -2.3
Trbv16A0A0B4J1H3 AC159476.2-201ENSMUST00000216221 418 ntBASIC0.71□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm35558-202ENSMUST00000221819 499 ntBASIC0.71□□□□□ -2.3
Trbv16A0A0B4J1H3 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.71□□□□□ -2.3
Trbv16A0A0B4J1H3 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm26080-201ENSMUST00000104069 131 ntBASIC0.7□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm14366-201ENSMUST00000121970 730 ntBASIC0.7□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm15167-201ENSMUST00000121997 187 ntBASIC0.7□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm24839-201ENSMUST00000122602 107 ntBASIC0.7□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm24632-201ENSMUST00000122770 323 ntBASIC0.7□□□□□ -2.3
Trbv16A0A0B4J1H3 Mir1942-201ENSMUST00000157274 63 ntBASIC0.7□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm22800-201ENSMUST00000175627 94 ntBASIC0.7□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.7□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm43510-201ENSMUST00000197922 353 ntBASIC0.7□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm46103-201ENSMUST00000217614 341 ntBASIC0.7□□□□□ -2.3
Trbv16A0A0B4J1H3 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.7□□□□□ -2.3
Trbv16A0A0B4J1H3 AC158521.1-201ENSMUST00000225295 660 ntBASIC0.7□□□□□ -2.3
Trbv16A0A0B4J1H3 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm23299-201ENSMUST00000082708 79 ntBASIC0.7□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm25403-201ENSMUST00000082971 143 ntBASIC0.7□□□□□ -2.3
Trbv16A0A0B4J1H3 Mir421-201ENSMUST00000083575 76 ntBASIC0.7□□□□□ -2.3
Trbv16A0A0B4J1H3 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC0.7□□□□□ -2.3
Trbv16A0A0B4J1H3 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
Trbv16A0A0B4J1H3 n-R5s67-201ENSMUST00000104336 114 ntBASIC0.69□□□□□ -2.3
Trbv16A0A0B4J1H3 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC0.69□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm13603-201ENSMUST00000119404 83 ntBASIC0.69□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm22136-201ENSMUST00000158751 268 ntBASIC0.69□□□□□ -2.3
Trbv16A0A0B4J1H3 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC0.69□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC0.69□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC0.69□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC0.69□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC0.69□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm28344-201ENSMUST00000185704 279 ntBASIC0.69□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
Trbv16A0A0B4J1H3 Igkv15-102-201ENSMUST00000197885 287 ntBASIC0.69□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm43026-201ENSMUST00000202972 325 ntBASIC0.69□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC0.69□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm45907-201ENSMUST00000213023 193 ntBASIC0.69□□□□□ -2.3
Trbv16A0A0B4J1H3 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC0.69□□□□□ -2.3
Trbv16A0A0B4J1H3 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.69□□□□□ -2.3
Trbv16A0A0B4J1H3 n-R5s37-201ENSMUST00000082533 118 ntBASIC0.69□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC0.69□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm11219-201ENSMUST00000118565 358 ntBASIC0.68□□□□□ -2.3
Trbv16A0A0B4J1H3 Defa-ps13-201ENSMUST00000120695 204 ntBASIC0.68□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm14979-201ENSMUST00000121561 1035 ntBASIC0.68□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm15279-201ENSMUST00000155593 288 ntBASIC0.68□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm3025-201ENSMUST00000163454 489 ntBASIC0.68□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm3111-201ENSMUST00000167426 490 ntBASIC0.68□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm27640-201ENSMUST00000184580 147 ntBASIC0.68□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm29613-201ENSMUST00000185846 313 ntBASIC0.68□□□□□ -2.3
Trbv16A0A0B4J1H3 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC0.68□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm29544-201ENSMUST00000188860 313 ntBASIC0.68□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm28808-201ENSMUST00000190978 313 ntBASIC0.68□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm38388-201ENSMUST00000195569 1430 ntBASIC0.68□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm42925-201ENSMUST00000197359 285 ntBASIC0.68□□□□□ -2.3
Trbv16A0A0B4J1H3 AC139186.1-201ENSMUST00000197610 94 ntBASIC0.68□□□□□ -2.3
Trbv16A0A0B4J1H3 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC0.68□□□□□ -2.3
Trbv16A0A0B4J1H3 Gm18854-201ENSMUST00000211196 329 ntBASIC0.68□□□□□ -2.3
Trbv16A0A0B4J1H3 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms