Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Gm8858-201ENSMUST00000118259 342 ntBASIC1.45□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm12304-201ENSMUST00000120312 385 ntBASIC1.45□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm12779-201ENSMUST00000121496 143 ntBASIC1.45□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.45□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm27396-201ENSMUST00000157708 58 ntBASIC1.45□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm25162-201ENSMUST00000158906 159 ntBASIC1.45□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm5277-201ENSMUST00000164923 556 ntBASIC1.45□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC1.45□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm22192-201ENSMUST00000175128 85 ntBASIC1.45□□□□□ -2.18
Trbv1A0A0B4J1G7 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC1.45□□□□□ -2.18
Trbv1A0A0B4J1G7 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC1.45□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm8747-201ENSMUST00000195392 751 ntBASIC1.45□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm42672-201ENSMUST00000197821 352 ntBASIC1.45□□□□□ -2.18
Trbv1A0A0B4J1G7 Mir378a-201ENSMUST00000198300 66 ntBASIC1.45□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC1.45□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.45□□□□□ -2.18
Trbv1A0A0B4J1G7 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.45□□□□□ -2.18
Trbv1A0A0B4J1G7 AC124569.4-201ENSMUST00000223830 1220 ntBASIC1.45□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm25586-201ENSMUST00000082499 112 ntBASIC1.45□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm25632-201ENSMUST00000083112 85 ntBASIC1.45□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm26265-201ENSMUST00000083277 135 ntBASIC1.45□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm23093-201ENSMUST00000083450 102 ntBASIC1.45□□□□□ -2.18
Trbv1A0A0B4J1G7 Snord7-201ENSMUST00000083781 97 ntBASIC1.45□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm37903-201ENSMUST00000192122 2381 ntBASIC1.45□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm25414-201ENSMUST00000101814 107 ntBASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm23422-201ENSMUST00000102000 107 ntBASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm12053-201ENSMUST00000119022 252 ntBASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm12646-201ENSMUST00000119144 238 ntBASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm23381-201ENSMUST00000157676 94 ntBASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm24053-201ENSMUST00000158620 105 ntBASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm43680-201ENSMUST00000199466 340 ntBASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm45386-201ENSMUST00000210194 218 ntBASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm45344-201ENSMUST00000211610 341 ntBASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm24151-201ENSMUST00000082758 141 ntBASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm26328-201ENSMUST00000082821 107 ntBASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm25794-201ENSMUST00000083286 107 ntBASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 AC124426.1-203ENSMUST00000221814 1362 ntBASIC1.44□□□□□ -2.18
Trbv1A0A0B4J1G7 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 Mir3096-201ENSMUST00000116685 71 ntBASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm22678-201ENSMUST00000116974 101 ntBASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm12806-201ENSMUST00000119384 268 ntBASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm14215-201ENSMUST00000120578 221 ntBASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm14402-201ENSMUST00000122217 508 ntBASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm16328-201ENSMUST00000126985 196 ntBASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm6182-201ENSMUST00000156439 1208 ntBASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm22603-201ENSMUST00000157603 96 ntBASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm24885-201ENSMUST00000158783 270 ntBASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm20689-201ENSMUST00000176033 279 ntBASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm27443-201ENSMUST00000184660 98 ntBASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm27959-201ENSMUST00000185172 111 ntBASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm18356-201ENSMUST00000185677 623 ntBASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm18296-201ENSMUST00000192475 783 ntBASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm37550-201ENSMUST00000193230 463 ntBASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 Mir7021-201ENSMUST00000197026 63 ntBASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm44754-201ENSMUST00000208155 400 ntBASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm44910-201ENSMUST00000208451 396 ntBASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 AC116465.1-201ENSMUST00000220324 235 ntBASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Trbv1A0A0B4J1G7 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm13728-201ENSMUST00000117471 400 ntBASIC1.42□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm15067-201ENSMUST00000119534 156 ntBASIC1.42□□□□□ -2.18
Trbv1A0A0B4J1G7 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.42□□□□□ -2.18
Trbv1A0A0B4J1G7 Trav20-201ENSMUST00000142754 347 ntBASIC1.42□□□□□ -2.18
Trbv1A0A0B4J1G7 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC1.42□□□□□ -2.18
Trbv1A0A0B4J1G7 Mir5118-201ENSMUST00000175551 67 ntBASIC1.42□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm21885-201ENSMUST00000178891 327 ntBASIC1.42□□□□□ -2.18
Trbv1A0A0B4J1G7 Mir7068-201ENSMUST00000183439 74 ntBASIC1.42□□□□□ -2.18
Trbv1A0A0B4J1G7 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.42□□□□□ -2.18
Trbv1A0A0B4J1G7 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC1.42□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm28404-201ENSMUST00000190242 453 ntBASIC1.42□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm9402-201ENSMUST00000196849 388 ntBASIC1.42□□□□□ -2.18
Trbv1A0A0B4J1G7 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC1.42□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm44256-201ENSMUST00000203304 335 ntBASIC1.42□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm17990-201ENSMUST00000211728 553 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms