Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
Trav6-5A0A075B6B5 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC0.79□□□□□ -2.28
Trav6-5A0A075B6B5 Gm42925-201ENSMUST00000197359 285 ntBASIC0.79□□□□□ -2.28
Trav6-5A0A075B6B5 Igkv13-82-201ENSMUST00000200308 346 ntBASIC0.79□□□□□ -2.28
Trav6-5A0A075B6B5 Gm31520-201ENSMUST00000203048 733 ntBASIC0.79□□□□□ -2.28
Trav6-5A0A075B6B5 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
Trav6-5A0A075B6B5 AC160863.1-201ENSMUST00000218412 317 ntBASIC0.79□□□□□ -2.28
Trav6-5A0A075B6B5 AC112274.2-201ENSMUST00000218436 170 ntBASIC0.79□□□□□ -2.28
Trav6-5A0A075B6B5 AC138290.2-201ENSMUST00000218822 369 ntBASIC0.79□□□□□ -2.28
Trav6-5A0A075B6B5 AC141642.1-201ENSMUST00000220598 229 ntBASIC0.79□□□□□ -2.28
Trav6-5A0A075B6B5 Gm21937-201ENSMUST00000222825 218 ntBASIC0.79□□□□□ -2.28
Trav6-5A0A075B6B5 AC168062.2-201ENSMUST00000228907 422 ntBASIC0.79□□□□□ -2.28
Trav6-5A0A075B6B5 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC0.79□□□□□ -2.28
Trav6-5A0A075B6B5 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Trav6-5A0A075B6B5 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
Trav6-5A0A075B6B5 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
Trav6-5A0A075B6B5 Gm13672-201ENSMUST00000117554 459 ntBASIC0.78□□□□□ -2.28
Trav6-5A0A075B6B5 Gm2003-201ENSMUST00000118537 636 ntBASIC0.78□□□□□ -2.28
Trav6-5A0A075B6B5 Gm2768-201ENSMUST00000121062 250 ntBASIC0.78□□□□□ -2.28
Trav6-5A0A075B6B5 Gm25294-201ENSMUST00000122791 104 ntBASIC0.78□□□□□ -2.28
Trav6-5A0A075B6B5 Snord116l14-201ENSMUST00000179875 94 ntBASIC0.78□□□□□ -2.28
Trav6-5A0A075B6B5 Gm16399-201ENSMUST00000181423 219 ntBASIC0.78□□□□□ -2.28
Trav6-5A0A075B6B5 Mir7091-201ENSMUST00000184075 79 ntBASIC0.78□□□□□ -2.28
Trav6-5A0A075B6B5 Gm7837-201ENSMUST00000190873 412 ntBASIC0.78□□□□□ -2.28
Trav6-5A0A075B6B5 Gm38149-201ENSMUST00000191943 339 ntBASIC0.78□□□□□ -2.28
Trav6-5A0A075B6B5 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC0.78□□□□□ -2.28
Trav6-5A0A075B6B5 Gm37319-201ENSMUST00000193500 636 ntBASIC0.78□□□□□ -2.28
Trav6-5A0A075B6B5 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC0.78□□□□□ -2.28
Trav6-5A0A075B6B5 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC0.78□□□□□ -2.28
Trav6-5A0A075B6B5 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC0.78□□□□□ -2.28
Trav6-5A0A075B6B5 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC0.78□□□□□ -2.28
Trav6-5A0A075B6B5 Gm46136-201ENSMUST00000214730 565 ntBASIC0.78□□□□□ -2.28
Trav6-5A0A075B6B5 AC152951.1-201ENSMUST00000218907 266 ntBASIC0.78□□□□□ -2.28
Trav6-5A0A075B6B5 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
Trav6-5A0A075B6B5 AC154521.1-201ENSMUST00000222635 330 ntBASIC0.78□□□□□ -2.28
Trav6-5A0A075B6B5 Gm25683-201ENSMUST00000083940 131 ntBASIC0.78□□□□□ -2.28
Trav6-5A0A075B6B5 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.78□□□□□ -2.29
Trav6-5A0A075B6B5 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
Trav6-5A0A075B6B5 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC0.77□□□□□ -2.29
Trav6-5A0A075B6B5 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC0.77□□□□□ -2.29
Trav6-5A0A075B6B5 Gm6182-201ENSMUST00000156439 1208 ntBASIC0.77□□□□□ -2.29
Trav6-5A0A075B6B5 Gm23752-201ENSMUST00000157584 115 ntBASIC0.77□□□□□ -2.29
Trav6-5A0A075B6B5 Gm24394-201ENSMUST00000158141 123 ntBASIC0.77□□□□□ -2.29
Trav6-5A0A075B6B5 Gm26213-201ENSMUST00000158582 110 ntBASIC0.77□□□□□ -2.29
Trav6-5A0A075B6B5 Gm24885-201ENSMUST00000158783 270 ntBASIC0.77□□□□□ -2.29
Trav6-5A0A075B6B5 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC0.77□□□□□ -2.29
Trav6-5A0A075B6B5 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC0.77□□□□□ -2.29
Trav6-5A0A075B6B5 Gm24388-201ENSMUST00000177872 107 ntBASIC0.77□□□□□ -2.29
Trav6-5A0A075B6B5 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC0.77□□□□□ -2.29
Trav6-5A0A075B6B5 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC0.77□□□□□ -2.29
Trav6-5A0A075B6B5 Gm45654-201ENSMUST00000210980 123 ntBASIC0.77□□□□□ -2.29
Trav6-5A0A075B6B5 Gm45344-201ENSMUST00000211610 341 ntBASIC0.77□□□□□ -2.29
Trav6-5A0A075B6B5 Gm21089-201ENSMUST00000215843 325 ntBASIC0.77□□□□□ -2.29
Trav6-5A0A075B6B5 CT485612.4-201ENSMUST00000223405 250 ntBASIC0.77□□□□□ -2.29
Trav6-5A0A075B6B5 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.77□□□□□ -2.29
Trav6-5A0A075B6B5 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.77□□□□□ -2.29
Trav6-5A0A075B6B5 AC168880.1-201ENSMUST00000225113 707 ntBASIC0.77□□□□□ -2.29
Trav6-5A0A075B6B5 Gm22620-201ENSMUST00000082700 133 ntBASIC0.77□□□□□ -2.29
Trav6-5A0A075B6B5 Mir221-201ENSMUST00000083488 95 ntBASIC0.77□□□□□ -2.29
Trav6-5A0A075B6B5 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
Trav6-5A0A075B6B5 Gm381-201ENSMUST00000117443 2037 ntBASIC0.76□□□□□ -2.29
Trav6-5A0A075B6B5 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
Trav6-5A0A075B6B5 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC0.76□□□□□ -2.29
Trav6-5A0A075B6B5 Gm8121-201ENSMUST00000153583 499 ntBASIC0.76□□□□□ -2.29
Trav6-5A0A075B6B5 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC0.76□□□□□ -2.29
Trav6-5A0A075B6B5 Gm28666-201ENSMUST00000186649 274 ntBASIC0.76□□□□□ -2.29
Trav6-5A0A075B6B5 Ighv1-32-201ENSMUST00000195149 351 ntBASIC0.76□□□□□ -2.29
Trav6-5A0A075B6B5 Gm43531-201ENSMUST00000200676 1114 ntBASIC0.76□□□□□ -2.29
Trav6-5A0A075B6B5 Gm10297-201ENSMUST00000207136 651 ntBASIC0.76□□□□□ -2.29
Trav6-5A0A075B6B5 Gm45907-201ENSMUST00000213023 193 ntBASIC0.76□□□□□ -2.29
Trav6-5A0A075B6B5 AC129202.1-201ENSMUST00000224895 526 ntBASIC0.76□□□□□ -2.29
Trav6-5A0A075B6B5 AC154252.1-201ENSMUST00000226041 473 ntBASIC0.76□□□□□ -2.29
Trav6-5A0A075B6B5 AC126939.3-201ENSMUST00000226061 166 ntBASIC0.76□□□□□ -2.29
Trav6-5A0A075B6B5 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC0.76□□□□□ -2.29
Trav6-5A0A075B6B5 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
Trav6-5A0A075B6B5 Gm14013-201ENSMUST00000119006 270 ntBASIC0.75□□□□□ -2.29
Trav6-5A0A075B6B5 Gm14972-201ENSMUST00000121780 364 ntBASIC0.75□□□□□ -2.29
Trav6-5A0A075B6B5 Gm2020-201ENSMUST00000145242 579 ntBASIC0.75□□□□□ -2.29
Trav6-5A0A075B6B5 Gm25423-201ENSMUST00000157609 107 ntBASIC0.75□□□□□ -2.29
Trav6-5A0A075B6B5 Gm22803-201ENSMUST00000158049 283 ntBASIC0.75□□□□□ -2.29
Trav6-5A0A075B6B5 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC0.75□□□□□ -2.29
Trav6-5A0A075B6B5 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC0.75□□□□□ -2.29
Trav6-5A0A075B6B5 Gm23090-201ENSMUST00000177331 78 ntBASIC0.75□□□□□ -2.29
Trav6-5A0A075B6B5 Gm25874-201ENSMUST00000178030 79 ntBASIC0.75□□□□□ -2.29
Trav6-5A0A075B6B5 Gm23963-201ENSMUST00000179603 77 ntBASIC0.75□□□□□ -2.29
Trav6-5A0A075B6B5 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC0.75□□□□□ -2.29
Trav6-5A0A075B6B5 Gm43199-201ENSMUST00000200019 307 ntBASIC0.75□□□□□ -2.29
Trav6-5A0A075B6B5 Gm17990-201ENSMUST00000211728 553 ntBASIC0.75□□□□□ -2.29
Trav6-5A0A075B6B5 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC0.75□□□□□ -2.29
Trav6-5A0A075B6B5 AC122341.1-201ENSMUST00000227291 560 ntBASIC0.75□□□□□ -2.29
Trav6-5A0A075B6B5 Gm22575-201ENSMUST00000082981 110 ntBASIC0.75□□□□□ -2.29
Trav6-5A0A075B6B5 Mir22-201ENSMUST00000083595 95 ntBASIC0.75□□□□□ -2.29
Trav6-5A0A075B6B5 Gm23102-201ENSMUST00000083724 116 ntBASIC0.75□□□□□ -2.29
Trav6-5A0A075B6B5 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Trav6-5A0A075B6B5 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
Trav6-5A0A075B6B5 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.74□□□□□ -2.29
Trav6-5A0A075B6B5 Gm15365-201ENSMUST00000122392 300 ntBASIC0.74□□□□□ -2.29
Trav6-5A0A075B6B5 Gm24915-201ENSMUST00000157288 78 ntBASIC0.74□□□□□ -2.29
Trav6-5A0A075B6B5 Gm23078-201ENSMUST00000157848 148 ntBASIC0.74□□□□□ -2.29
Trav6-5A0A075B6B5 Gm24851-201ENSMUST00000158028 103 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 107.9 ms