Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Gm28409-201ENSMUST00000187064 103 ntBASIC0.57□□□□□ -2.32
Trav3-4A0A075B654 Gm29754-201ENSMUST00000206269 358 ntBASIC0.57□□□□□ -2.32
Trav3-4A0A075B654 Gm44844-201ENSMUST00000207242 336 ntBASIC0.57□□□□□ -2.32
Trav3-4A0A075B654 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC0.57□□□□□ -2.32
Trav3-4A0A075B654 Gm45878-201ENSMUST00000211839 241 ntBASIC0.57□□□□□ -2.32
Trav3-4A0A075B654 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC0.57□□□□□ -2.32
Trav3-4A0A075B654 AC153522.1-201ENSMUST00000220047 1090 ntBASIC0.57□□□□□ -2.32
Trav3-4A0A075B654 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC0.57□□□□□ -2.32
Trav3-4A0A075B654 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.57□□□□□ -2.32
Trav3-4A0A075B654 Gm23741-201ENSMUST00000097237 171 ntBASIC0.57□□□□□ -2.32
Trav3-4A0A075B654 Gm13231-201ENSMUST00000119218 2850 ntBASIC0.57□□□□□ -2.32
Trav3-4A0A075B654 n-R5s67-201ENSMUST00000104336 114 ntBASIC0.56□□□□□ -2.32
Trav3-4A0A075B654 Gm23175-201ENSMUST00000104371 132 ntBASIC0.56□□□□□ -2.32
Trav3-4A0A075B654 Gm24839-201ENSMUST00000122602 107 ntBASIC0.56□□□□□ -2.32
Trav3-4A0A075B654 Gm24632-201ENSMUST00000122770 323 ntBASIC0.56□□□□□ -2.32
Trav3-4A0A075B654 Gm26029-201ENSMUST00000158659 132 ntBASIC0.56□□□□□ -2.32
Trav3-4A0A075B654 Gm25831-201ENSMUST00000158924 163 ntBASIC0.56□□□□□ -2.32
Trav3-4A0A075B654 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC0.56□□□□□ -2.32
Trav3-4A0A075B654 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
Trav3-4A0A075B654 Mir5112-201ENSMUST00000174897 60 ntBASIC0.56□□□□□ -2.32
Trav3-4A0A075B654 Gm21815-201ENSMUST00000178213 664 ntBASIC0.56□□□□□ -2.32
Trav3-4A0A075B654 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC0.56□□□□□ -2.32
Trav3-4A0A075B654 Gm45439-201ENSMUST00000211723 359 ntBASIC0.56□□□□□ -2.32
Trav3-4A0A075B654 Gm8125-201ENSMUST00000216602 738 ntBASIC0.56□□□□□ -2.32
Trav3-4A0A075B654 Gm46103-201ENSMUST00000217614 341 ntBASIC0.56□□□□□ -2.32
Trav3-4A0A075B654 AC158606.1-201ENSMUST00000220078 325 ntBASIC0.56□□□□□ -2.32
Trav3-4A0A075B654 Gm10264-201ENSMUST00000220589 429 ntBASIC0.56□□□□□ -2.32
Trav3-4A0A075B654 Gm25079-201ENSMUST00000082529 203 ntBASIC0.56□□□□□ -2.32
Trav3-4A0A075B654 Snord1a-201ENSMUST00000083160 74 ntBASIC0.56□□□□□ -2.32
Trav3-4A0A075B654 AC124456.1-201ENSMUST00000217391 2597 ntBASIC0.56□□□□□ -2.32
Trav3-4A0A075B654 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
Trav3-4A0A075B654 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
Trav3-4A0A075B654 Gm24282-201ENSMUST00000104232 66 ntBASIC0.55□□□□□ -2.32
Trav3-4A0A075B654 Gm14937-201ENSMUST00000119709 208 ntBASIC0.55□□□□□ -2.32
Trav3-4A0A075B654 Gm22027-201ENSMUST00000122737 127 ntBASIC0.55□□□□□ -2.32
Trav3-4A0A075B654 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC0.55□□□□□ -2.32
Trav3-4A0A075B654 Gm23854-201ENSMUST00000158378 108 ntBASIC0.55□□□□□ -2.32
Trav3-4A0A075B654 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.55□□□□□ -2.32
Trav3-4A0A075B654 Mir7226-201ENSMUST00000184953 60 ntBASIC0.55□□□□□ -2.32
Trav3-4A0A075B654 Gm43739-201ENSMUST00000198294 307 ntBASIC0.55□□□□□ -2.32
Trav3-4A0A075B654 Gm18691-201ENSMUST00000203593 872 ntBASIC0.55□□□□□ -2.32
Trav3-4A0A075B654 Gm44088-201ENSMUST00000204595 237 ntBASIC0.55□□□□□ -2.32
Trav3-4A0A075B654 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.55□□□□□ -2.32
Trav3-4A0A075B654 Gm45456-201ENSMUST00000210841 243 ntBASIC0.55□□□□□ -2.32
Trav3-4A0A075B654 Gm18160-201ENSMUST00000214279 827 ntBASIC0.55□□□□□ -2.32
Trav3-4A0A075B654 Gm19709-201ENSMUST00000215403 482 ntBASIC0.55□□□□□ -2.32
Trav3-4A0A075B654 Gm23058-201ENSMUST00000093703 107 ntBASIC0.55□□□□□ -2.32
Trav3-4A0A075B654 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC0.55□□□□□ -2.32
Trav3-4A0A075B654 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.55□□□□□ -2.32
Trav3-4A0A075B654 Gm14913-201ENSMUST00000120011 1093 ntBASIC0.54□□□□□ -2.32
Trav3-4A0A075B654 Gm14366-201ENSMUST00000121970 730 ntBASIC0.54□□□□□ -2.32
Trav3-4A0A075B654 Gm24598-201ENSMUST00000122510 74 ntBASIC0.54□□□□□ -2.32
Trav3-4A0A075B654 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC0.54□□□□□ -2.32
Trav3-4A0A075B654 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC0.54□□□□□ -2.32
Trav3-4A0A075B654 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC0.54□□□□□ -2.32
Trav3-4A0A075B654 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC0.54□□□□□ -2.32
Trav3-4A0A075B654 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC0.54□□□□□ -2.32
Trav3-4A0A075B654 Gm22803-201ENSMUST00000158049 283 ntBASIC0.54□□□□□ -2.32
Trav3-4A0A075B654 Gm24388-201ENSMUST00000177872 107 ntBASIC0.54□□□□□ -2.32
Trav3-4A0A075B654 Mir7028-201ENSMUST00000185016 64 ntBASIC0.54□□□□□ -2.32
Trav3-4A0A075B654 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC0.54□□□□□ -2.32
Trav3-4A0A075B654 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC0.54□□□□□ -2.32
Trav3-4A0A075B654 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC0.54□□□□□ -2.32
Trav3-4A0A075B654 Gm35558-202ENSMUST00000221819 499 ntBASIC0.54□□□□□ -2.32
Trav3-4A0A075B654 Gm23454-201ENSMUST00000083332 133 ntBASIC0.54□□□□□ -2.32
Trav3-4A0A075B654 Gm23102-201ENSMUST00000083724 116 ntBASIC0.54□□□□□ -2.32
Trav3-4A0A075B654 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
Trav3-4A0A075B654 Defa-ps13-201ENSMUST00000120695 204 ntBASIC0.53□□□□□ -2.32
Trav3-4A0A075B654 AA413626-201ENSMUST00000121125 494 ntBASIC0.53□□□□□ -2.32
Trav3-4A0A075B654 Gm16218-201ENSMUST00000155424 388 ntBASIC0.53□□□□□ -2.32
Trav3-4A0A075B654 Gm22551-201ENSMUST00000157795 103 ntBASIC0.53□□□□□ -2.32
Trav3-4A0A075B654 Gm24747-201ENSMUST00000157835 87 ntBASIC0.53□□□□□ -2.32
Trav3-4A0A075B654 Gm24902-201ENSMUST00000158126 123 ntBASIC0.53□□□□□ -2.32
Trav3-4A0A075B654 Igkv17-134-201ENSMUST00000168310 348 ntBASIC0.53□□□□□ -2.32
Trav3-4A0A075B654 Gm23963-201ENSMUST00000179603 77 ntBASIC0.53□□□□□ -2.32
Trav3-4A0A075B654 Gm27974-201ENSMUST00000183415 105 ntBASIC0.53□□□□□ -2.32
Trav3-4A0A075B654 Gm18667-201ENSMUST00000186523 484 ntBASIC0.53□□□□□ -2.32
Trav3-4A0A075B654 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC0.53□□□□□ -2.32
Trav3-4A0A075B654 Gm28912-201ENSMUST00000189001 234 ntBASIC0.53□□□□□ -2.32
Trav3-4A0A075B654 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.53□□□□□ -2.32
Trav3-4A0A075B654 Gm42509-201ENSMUST00000197390 781 ntBASIC0.53□□□□□ -2.32
Trav3-4A0A075B654 Igkv15-102-201ENSMUST00000197885 287 ntBASIC0.53□□□□□ -2.32
Trav3-4A0A075B654 Gm43512-201ENSMUST00000198495 176 ntBASIC0.53□□□□□ -2.32
Trav3-4A0A075B654 Gm45150-201ENSMUST00000206051 467 ntBASIC0.53□□□□□ -2.32
Trav3-4A0A075B654 Olfr1285-201ENSMUST00000208523 903 ntBASIC0.53□□□□□ -2.32
Trav3-4A0A075B654 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC0.53□□□□□ -2.32
Trav3-4A0A075B654 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
Trav3-4A0A075B654 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC0.53□□□□□ -2.32
Trav3-4A0A075B654 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.53□□□□□ -2.32
Trav3-4A0A075B654 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
Trav3-4A0A075B654 Gm24252-201ENSMUST00000083700 132 ntBASIC0.53□□□□□ -2.32
Trav3-4A0A075B654 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
Trav3-4A0A075B654 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
Trav3-4A0A075B654 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Trav3-4A0A075B654 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
Trav3-4A0A075B654 Gm22136-201ENSMUST00000158751 268 ntBASIC0.52□□□□□ -2.33
Trav3-4A0A075B654 Gm8114-201ENSMUST00000172225 484 ntBASIC0.52□□□□□ -2.33
Trav3-4A0A075B654 Mir6993-201ENSMUST00000184912 65 ntBASIC0.52□□□□□ -2.33
Trav3-4A0A075B654 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC0.52□□□□□ -2.33
Trav3-4A0A075B654 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms