Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm24291-201ENSMUST00000157633 162 ntBASIC2.34□□□□□ -2.03
H2afb1S4R1E0 Gm26186-201ENSMUST00000157689 125 ntBASIC2.34□□□□□ -2.03
H2afb1S4R1E0 Gm24885-201ENSMUST00000158783 270 ntBASIC2.34□□□□□ -2.03
H2afb1S4R1E0 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.34□□□□□ -2.03
H2afb1S4R1E0 Gm24084-201ENSMUST00000175173 137 ntBASIC2.34□□□□□ -2.03
H2afb1S4R1E0 Gm22367-201ENSMUST00000178930 132 ntBASIC2.34□□□□□ -2.03
H2afb1S4R1E0 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.34□□□□□ -2.03
H2afb1S4R1E0 Gm43472-201ENSMUST00000200175 154 ntBASIC2.34□□□□□ -2.03
H2afb1S4R1E0 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC2.34□□□□□ -2.03
H2afb1S4R1E0 Gm44811-201ENSMUST00000209120 228 ntBASIC2.34□□□□□ -2.03
H2afb1S4R1E0 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC2.34□□□□□ -2.03
H2afb1S4R1E0 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.34□□□□□ -2.03
H2afb1S4R1E0 AL590614.1-201ENSMUST00000226037 268 ntBASIC2.34□□□□□ -2.03
H2afb1S4R1E0 Gm10298-201ENSMUST00000074801 265 ntBASIC2.34□□□□□ -2.03
H2afb1S4R1E0 Gm25512-201ENSMUST00000083863 107 ntBASIC2.34□□□□□ -2.03
H2afb1S4R1E0 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.34□□□□□ -2.04
H2afb1S4R1E0 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
H2afb1S4R1E0 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
H2afb1S4R1E0 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
H2afb1S4R1E0 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.33□□□□□ -2.04
H2afb1S4R1E0 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
H2afb1S4R1E0 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.33□□□□□ -2.04
H2afb1S4R1E0 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
H2afb1S4R1E0 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
H2afb1S4R1E0 Gm15896-201ENSMUST00000118045 440 ntBASIC2.33□□□□□ -2.04
H2afb1S4R1E0 Gm14629-201ENSMUST00000122428 144 ntBASIC2.33□□□□□ -2.04
H2afb1S4R1E0 Gm23980-201ENSMUST00000157135 158 ntBASIC2.33□□□□□ -2.04
H2afb1S4R1E0 Gm25280-201ENSMUST00000157269 101 ntBASIC2.33□□□□□ -2.04
H2afb1S4R1E0 Gm24857-201ENSMUST00000158061 310 ntBASIC2.33□□□□□ -2.04
H2afb1S4R1E0 Gm25486-201ENSMUST00000158726 63 ntBASIC2.33□□□□□ -2.04
H2afb1S4R1E0 Gm26005-201ENSMUST00000158802 134 ntBASIC2.33□□□□□ -2.04
H2afb1S4R1E0 Gm16038-201ENSMUST00000159317 193 ntBASIC2.33□□□□□ -2.04
H2afb1S4R1E0 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
H2afb1S4R1E0 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.33□□□□□ -2.04
H2afb1S4R1E0 Gm24862-201ENSMUST00000179103 79 ntBASIC2.33□□□□□ -2.04
H2afb1S4R1E0 Gm23310-201ENSMUST00000179105 79 ntBASIC2.33□□□□□ -2.04
H2afb1S4R1E0 Gm25461-201ENSMUST00000179293 79 ntBASIC2.33□□□□□ -2.04
H2afb1S4R1E0 Gm28000-201ENSMUST00000184380 85 ntBASIC2.33□□□□□ -2.04
H2afb1S4R1E0 Mir195b-201ENSMUST00000184814 97 ntBASIC2.33□□□□□ -2.04
H2afb1S4R1E0 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.33□□□□□ -2.04
H2afb1S4R1E0 Gm23370-202ENSMUST00000197008 129 ntBASIC2.33□□□□□ -2.04
H2afb1S4R1E0 Gm44446-201ENSMUST00000204864 255 ntBASIC2.33□□□□□ -2.04
H2afb1S4R1E0 AC122225.1-201ENSMUST00000215641 369 ntBASIC2.33□□□□□ -2.04
H2afb1S4R1E0 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.33□□□□□ -2.04
H2afb1S4R1E0 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC2.33□□□□□ -2.04
H2afb1S4R1E0 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.33□□□□□ -2.04
H2afb1S4R1E0 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.33□□□□□ -2.04
H2afb1S4R1E0 Gm25929-201ENSMUST00000082784 107 ntBASIC2.33□□□□□ -2.04
H2afb1S4R1E0 Gm23723-201ENSMUST00000082996 132 ntBASIC2.33□□□□□ -2.04
H2afb1S4R1E0 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.33□□□□□ -2.04
H2afb1S4R1E0 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
H2afb1S4R1E0 Gm37642-201ENSMUST00000193166 1735 ntBASIC2.33□□□□□ -2.04
H2afb1S4R1E0 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Gm26154-201ENSMUST00000102339 96 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Snord98-201ENSMUST00000116819 65 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Gm14588-201ENSMUST00000119895 172 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Gm14972-201ENSMUST00000121780 364 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Gm23713-201ENSMUST00000157353 70 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Gm22141-201ENSMUST00000157403 277 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Gm23752-201ENSMUST00000157584 115 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Gm22615-201ENSMUST00000158102 70 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Gm15900-201ENSMUST00000161584 342 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Gm7953-201ENSMUST00000168278 469 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Gm20718-201ENSMUST00000176058 259 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Gm28740-201ENSMUST00000186142 215 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Gm5329-201ENSMUST00000186898 463 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Gm20885-201ENSMUST00000190192 654 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Gm19777-201ENSMUST00000191940 358 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Gm37128-201ENSMUST00000192599 232 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Gm37104-201ENSMUST00000193278 196 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Gm43284-201ENSMUST00000200103 253 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Gm34314-201ENSMUST00000203622 367 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Gm2436-201ENSMUST00000219562 774 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Gm22806-201ENSMUST00000082738 136 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Gm22287-201ENSMUST00000083197 107 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Gm22353-201ENSMUST00000083918 136 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Gm26111-201ENSMUST00000083969 106 ntBASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
H2afb1S4R1E0 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
H2afb1S4R1E0 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
H2afb1S4R1E0 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
H2afb1S4R1E0 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.31□□□□□ -2.04
H2afb1S4R1E0 Gm23128-201ENSMUST00000104257 132 ntBASIC2.31□□□□□ -2.04
H2afb1S4R1E0 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
H2afb1S4R1E0 Gm14269-201ENSMUST00000120455 306 ntBASIC2.31□□□□□ -2.04
H2afb1S4R1E0 Gm14551-201ENSMUST00000120802 256 ntBASIC2.31□□□□□ -2.04
H2afb1S4R1E0 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.31□□□□□ -2.04
H2afb1S4R1E0 Gm22792-201ENSMUST00000157225 133 ntBASIC2.31□□□□□ -2.04
H2afb1S4R1E0 Mir1942-201ENSMUST00000157274 63 ntBASIC2.31□□□□□ -2.04
H2afb1S4R1E0 Gm24504-201ENSMUST00000157679 100 ntBASIC2.31□□□□□ -2.04
H2afb1S4R1E0 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
H2afb1S4R1E0 Gm20257-202ENSMUST00000188643 130 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms