Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm12934-201ENSMUST00000119221 343 ntBASIC1.8□□□□□ -2.12
Cldn9Q9Z0S7 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.8□□□□□ -2.12
Cldn9Q9Z0S7 Gm23981-201ENSMUST00000157136 106 ntBASIC1.8□□□□□ -2.12
Cldn9Q9Z0S7 Gm23586-201ENSMUST00000157657 123 ntBASIC1.8□□□□□ -2.12
Cldn9Q9Z0S7 Gm24962-201ENSMUST00000157917 109 ntBASIC1.8□□□□□ -2.12
Cldn9Q9Z0S7 Gm24770-201ENSMUST00000158505 92 ntBASIC1.8□□□□□ -2.12
Cldn9Q9Z0S7 Gm9022-202ENSMUST00000183285 483 ntBASIC1.8□□□□□ -2.12
Cldn9Q9Z0S7 Gm29550-201ENSMUST00000185543 285 ntBASIC1.8□□□□□ -2.12
Cldn9Q9Z0S7 Gm38333-201ENSMUST00000193608 604 ntBASIC1.8□□□□□ -2.12
Cldn9Q9Z0S7 Gm37709-201ENSMUST00000195074 600 ntBASIC1.8□□□□□ -2.12
Cldn9Q9Z0S7 Mir3068-202ENSMUST00000197755 79 ntBASIC1.8□□□□□ -2.12
Cldn9Q9Z0S7 AC069561.2-201ENSMUST00000217596 420 ntBASIC1.8□□□□□ -2.12
Cldn9Q9Z0S7 Gm18774-201ENSMUST00000218269 601 ntBASIC1.8□□□□□ -2.12
Cldn9Q9Z0S7 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.8□□□□□ -2.12
Cldn9Q9Z0S7 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.8□□□□□ -2.12
Cldn9Q9Z0S7 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.8□□□□□ -2.12
Cldn9Q9Z0S7 Gm24045-201ENSMUST00000083113 98 ntBASIC1.8□□□□□ -2.12
Cldn9Q9Z0S7 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.8□□□□□ -2.12
Cldn9Q9Z0S7 Gm20541-201ENSMUST00000173035 1406 ntBASIC1.8□□□□□ -2.12
Cldn9Q9Z0S7 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Cldn9Q9Z0S7 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
Cldn9Q9Z0S7 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Cldn9Q9Z0S7 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Cldn9Q9Z0S7 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Cldn9Q9Z0S7 Gm25938-201ENSMUST00000104139 166 ntBASIC1.79□□□□□ -2.12
Cldn9Q9Z0S7 Defa-ps13-201ENSMUST00000120695 204 ntBASIC1.79□□□□□ -2.12
Cldn9Q9Z0S7 Gm14551-201ENSMUST00000120802 256 ntBASIC1.79□□□□□ -2.12
Cldn9Q9Z0S7 Gm15077-201ENSMUST00000122344 362 ntBASIC1.79□□□□□ -2.12
Cldn9Q9Z0S7 Gm23317-201ENSMUST00000157999 129 ntBASIC1.79□□□□□ -2.12
Cldn9Q9Z0S7 Gm22076-201ENSMUST00000158601 84 ntBASIC1.79□□□□□ -2.12
Cldn9Q9Z0S7 Gm25051-201ENSMUST00000158602 249 ntBASIC1.79□□□□□ -2.12
Cldn9Q9Z0S7 Gm22668-201ENSMUST00000158716 260 ntBASIC1.79□□□□□ -2.12
Cldn9Q9Z0S7 Gm27544-201ENSMUST00000185069 155 ntBASIC1.79□□□□□ -2.12
Cldn9Q9Z0S7 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.79□□□□□ -2.12
Cldn9Q9Z0S7 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC1.79□□□□□ -2.12
Cldn9Q9Z0S7 Gm32175-201ENSMUST00000193641 346 ntBASIC1.79□□□□□ -2.12
Cldn9Q9Z0S7 Gm43512-201ENSMUST00000198495 176 ntBASIC1.79□□□□□ -2.12
Cldn9Q9Z0S7 Gm43529-201ENSMUST00000199178 412 ntBASIC1.79□□□□□ -2.12
Cldn9Q9Z0S7 Gm44011-201ENSMUST00000203336 394 ntBASIC1.79□□□□□ -2.12
Cldn9Q9Z0S7 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC1.79□□□□□ -2.12
Cldn9Q9Z0S7 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Cldn9Q9Z0S7 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Cldn9Q9Z0S7 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.79□□□□□ -2.12
Cldn9Q9Z0S7 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Cldn9Q9Z0S7 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Cldn9Q9Z0S7 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.78□□□□□ -2.12
Cldn9Q9Z0S7 Gm23202-201ENSMUST00000104376 129 ntBASIC1.78□□□□□ -2.12
Cldn9Q9Z0S7 Gm12584-201ENSMUST00000117109 1105 ntBASIC1.78□□□□□ -2.12
Cldn9Q9Z0S7 Gm11935-201ENSMUST00000118608 399 ntBASIC1.78□□□□□ -2.12
Cldn9Q9Z0S7 Gm12646-201ENSMUST00000119144 238 ntBASIC1.78□□□□□ -2.12
Cldn9Q9Z0S7 Gm6444-201ENSMUST00000119611 458 ntBASIC1.78□□□□□ -2.12
Cldn9Q9Z0S7 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC1.78□□□□□ -2.12
Cldn9Q9Z0S7 Gm24177-201ENSMUST00000158927 131 ntBASIC1.78□□□□□ -2.12
Cldn9Q9Z0S7 Gm23289-201ENSMUST00000175615 108 ntBASIC1.78□□□□□ -2.12
Cldn9Q9Z0S7 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Cldn9Q9Z0S7 Gm23862-201ENSMUST00000180342 94 ntBASIC1.78□□□□□ -2.12
Cldn9Q9Z0S7 Gm37599-201ENSMUST00000193067 489 ntBASIC1.78□□□□□ -2.12
Cldn9Q9Z0S7 Gm35212-201ENSMUST00000196672 606 ntBASIC1.78□□□□□ -2.12
Cldn9Q9Z0S7 Gm3724-201ENSMUST00000197957 349 ntBASIC1.78□□□□□ -2.12
Cldn9Q9Z0S7 Gm18453-201ENSMUST00000208000 626 ntBASIC1.78□□□□□ -2.12
Cldn9Q9Z0S7 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC1.78□□□□□ -2.12
Cldn9Q9Z0S7 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC1.78□□□□□ -2.12
Cldn9Q9Z0S7 AC159203.2-201ENSMUST00000221326 193 ntBASIC1.78□□□□□ -2.12
Cldn9Q9Z0S7 Gm25698-201ENSMUST00000082897 107 ntBASIC1.78□□□□□ -2.12
Cldn9Q9Z0S7 Mir10a-201ENSMUST00000083585 110 ntBASIC1.78□□□□□ -2.12
Cldn9Q9Z0S7 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Cldn9Q9Z0S7 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC1.78□□□□□ -2.12
Cldn9Q9Z0S7 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
Cldn9Q9Z0S7 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.77□□□□□ -2.13
Cldn9Q9Z0S7 Gm26384-201ENSMUST00000102183 110 ntBASIC1.77□□□□□ -2.13
Cldn9Q9Z0S7 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Cldn9Q9Z0S7 Gm23950-201ENSMUST00000104026 129 ntBASIC1.77□□□□□ -2.13
Cldn9Q9Z0S7 n-R5s202-201ENSMUST00000104517 114 ntBASIC1.77□□□□□ -2.13
Cldn9Q9Z0S7 Gm15692-201ENSMUST00000152173 352 ntBASIC1.77□□□□□ -2.13
Cldn9Q9Z0S7 Gm23381-201ENSMUST00000157676 94 ntBASIC1.77□□□□□ -2.13
Cldn9Q9Z0S7 Gm23352-201ENSMUST00000158428 64 ntBASIC1.77□□□□□ -2.13
Cldn9Q9Z0S7 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
Cldn9Q9Z0S7 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
Cldn9Q9Z0S7 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.77□□□□□ -2.13
Cldn9Q9Z0S7 Mir7021-201ENSMUST00000197026 63 ntBASIC1.77□□□□□ -2.13
Cldn9Q9Z0S7 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC1.77□□□□□ -2.13
Cldn9Q9Z0S7 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.77□□□□□ -2.13
Cldn9Q9Z0S7 AC183092.2-201ENSMUST00000225542 1153 ntBASIC1.77□□□□□ -2.13
Cldn9Q9Z0S7 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Cldn9Q9Z0S7 Gm22620-201ENSMUST00000082700 133 ntBASIC1.77□□□□□ -2.13
Cldn9Q9Z0S7 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.77□□□□□ -2.13
Cldn9Q9Z0S7 Snora33-201ENSMUST00000093556 129 ntBASIC1.77□□□□□ -2.13
Cldn9Q9Z0S7 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Cldn9Q9Z0S7 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Cldn9Q9Z0S7 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
Cldn9Q9Z0S7 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.77□□□□□ -2.13
Cldn9Q9Z0S7 Gm45461-201ENSMUST00000211726 4535 ntBASIC1.76□□□□□ -2.13
Cldn9Q9Z0S7 Trav20-201ENSMUST00000142754 347 ntBASIC1.76□□□□□ -2.13
Cldn9Q9Z0S7 Snord11-201ENSMUST00000158468 84 ntBASIC1.76□□□□□ -2.13
Cldn9Q9Z0S7 Gm25711-201ENSMUST00000158633 128 ntBASIC1.76□□□□□ -2.13
Cldn9Q9Z0S7 Gm22891-201ENSMUST00000158641 164 ntBASIC1.76□□□□□ -2.13
Cldn9Q9Z0S7 Gm24656-201ENSMUST00000177548 132 ntBASIC1.76□□□□□ -2.13
Cldn9Q9Z0S7 Gm23144-201ENSMUST00000180226 107 ntBASIC1.76□□□□□ -2.13
Cldn9Q9Z0S7 Mir6379-201ENSMUST00000183392 115 ntBASIC1.76□□□□□ -2.13
Cldn9Q9Z0S7 Gm27898-201ENSMUST00000183987 80 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 137.5 ms