Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Prpf40aQ9R1C7 Gm42547-201ENSMUST00000201159 3798 ntBASIC4.37□□□□□ -1.71
Prpf40aQ9R1C7 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Prpf40aQ9R1C7 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
Prpf40aQ9R1C7 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.36□□□□□ -1.71
Prpf40aQ9R1C7 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Prpf40aQ9R1C7 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.36□□□□□ -1.71
Prpf40aQ9R1C7 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Prpf40aQ9R1C7 Gm21034-201ENSMUST00000207390 2608 ntBASIC4.36□□□□□ -1.71
Prpf40aQ9R1C7 Gm24318-201ENSMUST00000104490 131 ntBASIC4.36□□□□□ -1.71
Prpf40aQ9R1C7 Gm9003-201ENSMUST00000121810 482 ntBASIC4.36□□□□□ -1.71
Prpf40aQ9R1C7 Gm25104-201ENSMUST00000122476 163 ntBASIC4.36□□□□□ -1.71
Prpf40aQ9R1C7 Gm25716-201ENSMUST00000158628 104 ntBASIC4.36□□□□□ -1.71
Prpf40aQ9R1C7 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.36□□□□□ -1.71
Prpf40aQ9R1C7 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Prpf40aQ9R1C7 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC4.36□□□□□ -1.71
Prpf40aQ9R1C7 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC4.36□□□□□ -1.71
Prpf40aQ9R1C7 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
Prpf40aQ9R1C7 AC125223.3-201ENSMUST00000223588 2067 ntBASIC4.36□□□□□ -1.71
Prpf40aQ9R1C7 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.36□□□□□ -1.71
Prpf40aQ9R1C7 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC4.35□□□□□ -1.71
Prpf40aQ9R1C7 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.35□□□□□ -1.71
Prpf40aQ9R1C7 Gm7123-201ENSMUST00000117647 213 ntBASIC4.35□□□□□ -1.71
Prpf40aQ9R1C7 Gm13167-201ENSMUST00000118554 578 ntBASIC4.35□□□□□ -1.71
Prpf40aQ9R1C7 n-R5s150-201ENSMUST00000122705 108 ntBASIC4.35□□□□□ -1.71
Prpf40aQ9R1C7 Gm22606-201ENSMUST00000158290 103 ntBASIC4.35□□□□□ -1.71
Prpf40aQ9R1C7 Gm24056-201ENSMUST00000158617 146 ntBASIC4.35□□□□□ -1.71
Prpf40aQ9R1C7 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.35□□□□□ -1.71
Prpf40aQ9R1C7 Gm45539-201ENSMUST00000210313 428 ntBASIC4.35□□□□□ -1.71
Prpf40aQ9R1C7 AC132615.1-201ENSMUST00000213873 255 ntBASIC4.35□□□□□ -1.71
Prpf40aQ9R1C7 n-R5s85-201ENSMUST00000083453 113 ntBASIC4.35□□□□□ -1.71
Prpf40aQ9R1C7 Gm22828-201ENSMUST00000083768 107 ntBASIC4.35□□□□□ -1.71
Prpf40aQ9R1C7 Gm10813-201ENSMUST00000099936 90 ntBASIC4.35□□□□□ -1.71
Prpf40aQ9R1C7 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Prpf40aQ9R1C7 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Prpf40aQ9R1C7 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC4.34□□□□□ -1.71
Prpf40aQ9R1C7 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.34□□□□□ -1.71
Prpf40aQ9R1C7 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Prpf40aQ9R1C7 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Prpf40aQ9R1C7 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
Prpf40aQ9R1C7 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Prpf40aQ9R1C7 Gm24263-201ENSMUST00000104059 107 ntBASIC4.34□□□□□ -1.71
Prpf40aQ9R1C7 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC4.34□□□□□ -1.71
Prpf40aQ9R1C7 Gm25427-201ENSMUST00000157605 103 ntBASIC4.34□□□□□ -1.71
Prpf40aQ9R1C7 Gm27396-201ENSMUST00000157708 58 ntBASIC4.34□□□□□ -1.71
Prpf40aQ9R1C7 Gm7241-201ENSMUST00000159853 357 ntBASIC4.34□□□□□ -1.71
Prpf40aQ9R1C7 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.34□□□□□ -1.71
Prpf40aQ9R1C7 AC150901.1-201ENSMUST00000208407 145 ntBASIC4.34□□□□□ -1.71
Prpf40aQ9R1C7 Gm18991-201ENSMUST00000209225 746 ntBASIC4.34□□□□□ -1.71
Prpf40aQ9R1C7 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC4.34□□□□□ -1.71
Prpf40aQ9R1C7 AC124746.2-201ENSMUST00000226594 427 ntBASIC4.34□□□□□ -1.71
Prpf40aQ9R1C7 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Prpf40aQ9R1C7 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
Prpf40aQ9R1C7 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Prpf40aQ9R1C7 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Prpf40aQ9R1C7 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Prpf40aQ9R1C7 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.34□□□□□ -1.72
Prpf40aQ9R1C7 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Prpf40aQ9R1C7 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Prpf40aQ9R1C7 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Prpf40aQ9R1C7 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Prpf40aQ9R1C7 Mir551b-201ENSMUST00000102165 98 ntBASIC4.33□□□□□ -1.72
Prpf40aQ9R1C7 Gm24582-201ENSMUST00000103967 103 ntBASIC4.33□□□□□ -1.72
Prpf40aQ9R1C7 Gm24503-201ENSMUST00000158454 135 ntBASIC4.33□□□□□ -1.72
Prpf40aQ9R1C7 Mir3620-201ENSMUST00000184710 61 ntBASIC4.33□□□□□ -1.72
Prpf40aQ9R1C7 Gm29005-201ENSMUST00000186773 320 ntBASIC4.33□□□□□ -1.72
Prpf40aQ9R1C7 Gm46998-201ENSMUST00000221444 330 ntBASIC4.33□□□□□ -1.72
Prpf40aQ9R1C7 Gm24762-201ENSMUST00000083689 104 ntBASIC4.33□□□□□ -1.72
Prpf40aQ9R1C7 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Prpf40aQ9R1C7 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Prpf40aQ9R1C7 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Prpf40aQ9R1C7 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.32□□□□□ -1.72
Prpf40aQ9R1C7 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Prpf40aQ9R1C7 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Prpf40aQ9R1C7 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Prpf40aQ9R1C7 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Prpf40aQ9R1C7 Gm24281-201ENSMUST00000104234 136 ntBASIC4.32□□□□□ -1.72
Prpf40aQ9R1C7 Gm13797-201ENSMUST00000121792 120 ntBASIC4.32□□□□□ -1.72
Prpf40aQ9R1C7 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.32□□□□□ -1.72
Prpf40aQ9R1C7 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Prpf40aQ9R1C7 Gm22398-201ENSMUST00000174941 125 ntBASIC4.32□□□□□ -1.72
Prpf40aQ9R1C7 Gm25731-201ENSMUST00000175167 125 ntBASIC4.32□□□□□ -1.72
Prpf40aQ9R1C7 Gm25198-201ENSMUST00000178574 110 ntBASIC4.32□□□□□ -1.72
Prpf40aQ9R1C7 Gm42623-201ENSMUST00000197225 379 ntBASIC4.32□□□□□ -1.72
Prpf40aQ9R1C7 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC4.32□□□□□ -1.72
Prpf40aQ9R1C7 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.32□□□□□ -1.72
Prpf40aQ9R1C7 CU062626.2-201ENSMUST00000223953 274 ntBASIC4.32□□□□□ -1.72
Prpf40aQ9R1C7 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC4.32□□□□□ -1.72
Prpf40aQ9R1C7 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.32□□□□□ -1.72
Prpf40aQ9R1C7 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
Prpf40aQ9R1C7 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Prpf40aQ9R1C7 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Prpf40aQ9R1C7 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Prpf40aQ9R1C7 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
Prpf40aQ9R1C7 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Prpf40aQ9R1C7 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Prpf40aQ9R1C7 Gm23273-201ENSMUST00000104058 135 ntBASIC4.31□□□□□ -1.72
Prpf40aQ9R1C7 Gm14816-201ENSMUST00000117174 294 ntBASIC4.31□□□□□ -1.72
Prpf40aQ9R1C7 Gm14069-201ENSMUST00000120815 229 ntBASIC4.31□□□□□ -1.72
Prpf40aQ9R1C7 Gm37791-201ENSMUST00000195081 286 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms