Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.42□□□□□ -2.34
Scn11aQ9R053 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.42□□□□□ -2.34
Scn11aQ9R053 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.42□□□□□ -2.34
Scn11aQ9R053 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.42□□□□□ -2.34
Scn11aQ9R053 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.42□□□□□ -2.34
Scn11aQ9R053 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.42□□□□□ -2.34
Scn11aQ9R053 Mir32-201ENSMUST00000083610 70 ntBASIC0.42□□□□□ -2.34
Scn11aQ9R053 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.42□□□□□ -2.34
Scn11aQ9R053 Gm14363-201ENSMUST00000122304 409 ntBASIC0.42□□□□□ -2.34
Scn11aQ9R053 Gm22208-201ENSMUST00000122658 110 ntBASIC0.42□□□□□ -2.34
Scn11aQ9R053 Gm24747-201ENSMUST00000157835 87 ntBASIC0.42□□□□□ -2.34
Scn11aQ9R053 Mir5129-201ENSMUST00000174938 78 ntBASIC0.42□□□□□ -2.34
Scn11aQ9R053 Gm27660-201ENSMUST00000184028 208 ntBASIC0.42□□□□□ -2.34
Scn11aQ9R053 Gm37934-201ENSMUST00000192902 402 ntBASIC0.42□□□□□ -2.34
Scn11aQ9R053 Gm23299-201ENSMUST00000082708 79 ntBASIC0.42□□□□□ -2.34
Scn11aQ9R053 Mir710-201ENSMUST00000102088 110 ntBASIC0.41□□□□□ -2.34
Scn11aQ9R053 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
Scn11aQ9R053 Gm14411-201ENSMUST00000121798 914 ntBASIC0.41□□□□□ -2.34
Scn11aQ9R053 Gm26116-201ENSMUST00000175600 77 ntBASIC0.41□□□□□ -2.34
Scn11aQ9R053 Gm29573-201ENSMUST00000190291 919 ntBASIC0.41□□□□□ -2.34
Scn11aQ9R053 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC0.41□□□□□ -2.34
Scn11aQ9R053 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
Scn11aQ9R053 mt-Tl1-201ENSMUST00000082391 75 ntBASIC0.41□□□□□ -2.34
Scn11aQ9R053 Gm2348-201ENSMUST00000108782 300 ntBASIC0.4□□□□□ -2.35
Scn11aQ9R053 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC0.4□□□□□ -2.35
Scn11aQ9R053 Gm25335-201ENSMUST00000158043 103 ntBASIC0.4□□□□□ -2.35
Scn11aQ9R053 Gm16147-201ENSMUST00000162143 373 ntBASIC0.4□□□□□ -2.35
Scn11aQ9R053 Gm2966-201ENSMUST00000166052 481 ntBASIC0.4□□□□□ -2.35
Scn11aQ9R053 Gm17204-201ENSMUST00000167936 478 ntBASIC0.4□□□□□ -2.35
Scn11aQ9R053 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC0.4□□□□□ -2.35
Scn11aQ9R053 Gm36966-201ENSMUST00000192217 413 ntBASIC0.4□□□□□ -2.35
Scn11aQ9R053 Gm37979-201ENSMUST00000193065 712 ntBASIC0.4□□□□□ -2.35
Scn11aQ9R053 Gm44254-201ENSMUST00000204184 322 ntBASIC0.4□□□□□ -2.35
Scn11aQ9R053 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC0.4□□□□□ -2.35
Scn11aQ9R053 Gm24919-201ENSMUST00000083020 106 ntBASIC0.4□□□□□ -2.35
Scn11aQ9R053 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.4□□□□□ -2.35
Scn11aQ9R053 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.4□□□□□ -2.35
Scn11aQ9R053 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC0.4□□□□□ -2.35
Scn11aQ9R053 Gm11367-201ENSMUST00000117802 120 ntBASIC0.4□□□□□ -2.35
Scn11aQ9R053 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.4□□□□□ -2.35
Scn11aQ9R053 Mir191-201ENSMUST00000196210 74 ntBASIC0.4□□□□□ -2.35
Scn11aQ9R053 Gm45530-201ENSMUST00000211658 225 ntBASIC0.4□□□□□ -2.35
Scn11aQ9R053 AC105958.2-201ENSMUST00000214167 191 ntBASIC0.4□□□□□ -2.35
Scn11aQ9R053 AC165106.2-201ENSMUST00000226749 97 ntBASIC0.4□□□□□ -2.35
Scn11aQ9R053 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC0.39□□□□□ -2.35
Scn11aQ9R053 Gm11813-201ENSMUST00000118586 291 ntBASIC0.39□□□□□ -2.35
Scn11aQ9R053 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.39□□□□□ -2.35
Scn11aQ9R053 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC0.39□□□□□ -2.35
Scn11aQ9R053 Gm23312-201ENSMUST00000158774 102 ntBASIC0.39□□□□□ -2.35
Scn11aQ9R053 Gm24229-201ENSMUST00000158830 118 ntBASIC0.39□□□□□ -2.35
Scn11aQ9R053 Gm23704-201ENSMUST00000158844 340 ntBASIC0.39□□□□□ -2.35
Scn11aQ9R053 Mir466m-201ENSMUST00000175052 84 ntBASIC0.39□□□□□ -2.35
Scn11aQ9R053 Mir3066-201ENSMUST00000175296 83 ntBASIC0.39□□□□□ -2.35
Scn11aQ9R053 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
Scn11aQ9R053 AC167140.1-201ENSMUST00000224710 403 ntBASIC0.39□□□□□ -2.35
Scn11aQ9R053 Gm24018-201ENSMUST00000083232 107 ntBASIC0.39□□□□□ -2.35
Scn11aQ9R053 Mir137-201ENSMUST00000083635 73 ntBASIC0.39□□□□□ -2.35
Scn11aQ9R053 Gm22759-201ENSMUST00000102276 96 ntBASIC0.38□□□□□ -2.35
Scn11aQ9R053 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC0.38□□□□□ -2.35
Scn11aQ9R053 Mir3086-201ENSMUST00000175072 87 ntBASIC0.38□□□□□ -2.35
Scn11aQ9R053 Gm7329-201ENSMUST00000185915 210 ntBASIC0.38□□□□□ -2.35
Scn11aQ9R053 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC0.38□□□□□ -2.35
Scn11aQ9R053 AC133176.1-201ENSMUST00000226668 219 ntBASIC0.38□□□□□ -2.35
Scn11aQ9R053 n-R5s37-201ENSMUST00000082533 118 ntBASIC0.38□□□□□ -2.35
Scn11aQ9R053 AA413626-201ENSMUST00000121125 494 ntBASIC0.37□□□□□ -2.35
Scn11aQ9R053 Gm22337-201ENSMUST00000157721 132 ntBASIC0.37□□□□□ -2.35
Scn11aQ9R053 Gm23559-201ENSMUST00000157824 103 ntBASIC0.37□□□□□ -2.35
Scn11aQ9R053 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC0.37□□□□□ -2.35
Scn11aQ9R053 Gm10264-201ENSMUST00000220589 429 ntBASIC0.37□□□□□ -2.35
Scn11aQ9R053 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
Scn11aQ9R053 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.37□□□□□ -2.35
Scn11aQ9R053 Gm14932-201ENSMUST00000117112 453 ntBASIC0.37□□□□□ -2.35
Scn11aQ9R053 Gm24559-201ENSMUST00000157519 121 ntBASIC0.37□□□□□ -2.35
Scn11aQ9R053 Gm22962-201ENSMUST00000157962 73 ntBASIC0.37□□□□□ -2.35
Scn11aQ9R053 Gm8161-201ENSMUST00000168739 481 ntBASIC0.37□□□□□ -2.35
Scn11aQ9R053 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC0.37□□□□□ -2.35
Scn11aQ9R053 Gm29460-201ENSMUST00000188607 714 ntBASIC0.37□□□□□ -2.35
Scn11aQ9R053 Gm14884-201ENSMUST00000120456 196 ntBASIC0.36□□□□□ -2.35
Scn11aQ9R053 Gm24808-201ENSMUST00000157993 118 ntBASIC0.36□□□□□ -2.35
Scn11aQ9R053 Gm24086-201ENSMUST00000175171 98 ntBASIC0.36□□□□□ -2.35
Scn11aQ9R053 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
Scn11aQ9R053 Gm44459-201ENSMUST00000203926 160 ntBASIC0.36□□□□□ -2.35
Scn11aQ9R053 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
Scn11aQ9R053 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
Scn11aQ9R053 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC0.35□□□□□ -2.35
Scn11aQ9R053 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC0.35□□□□□ -2.35
Scn11aQ9R053 Mir3057-201ENSMUST00000175040 91 ntBASIC0.35□□□□□ -2.35
Scn11aQ9R053 Gm24333-201ENSMUST00000175101 84 ntBASIC0.35□□□□□ -2.35
Scn11aQ9R053 Gm20811-201ENSMUST00000190500 553 ntBASIC0.35□□□□□ -2.35
Scn11aQ9R053 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC0.35□□□□□ -2.35
Scn11aQ9R053 Gm43706-201ENSMUST00000198767 2652 ntBASIC0.35□□□□□ -2.35
Scn11aQ9R053 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC0.34□□□□□ -2.35
Scn11aQ9R053 Mdga2-203ENSMUST00000113942 423 ntBASIC0.34□□□□□ -2.35
Scn11aQ9R053 Gm13046-201ENSMUST00000117391 501 ntBASIC0.34□□□□□ -2.35
Scn11aQ9R053 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
Scn11aQ9R053 Gm26101-201ENSMUST00000157246 105 ntBASIC0.34□□□□□ -2.35
Scn11aQ9R053 Mir6374-201ENSMUST00000184003 107 ntBASIC0.34□□□□□ -2.35
Scn11aQ9R053 Gm38231-201ENSMUST00000192030 347 ntBASIC0.34□□□□□ -2.35
Scn11aQ9R053 Gm43284-201ENSMUST00000200103 253 ntBASIC0.34□□□□□ -2.35
Scn11aQ9R053 Gm45907-201ENSMUST00000213023 193 ntBASIC0.34□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 168.7 ms