Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Gm23186-201ENSMUST00000180078 107 ntBASIC2.55□□□□□ -2
Cpsf3Q9QXK7 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.55□□□□□ -2
Cpsf3Q9QXK7 Mir6370-201ENSMUST00000183510 120 ntBASIC2.55□□□□□ -2
Cpsf3Q9QXK7 Gm27369-201ENSMUST00000185182 71 ntBASIC2.55□□□□□ -2
Cpsf3Q9QXK7 Gm28169-201ENSMUST00000190342 345 ntBASIC2.55□□□□□ -2
Cpsf3Q9QXK7 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.55□□□□□ -2
Cpsf3Q9QXK7 Gm43083-201ENSMUST00000199594 476 ntBASIC2.55□□□□□ -2
Cpsf3Q9QXK7 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC2.55□□□□□ -2
Cpsf3Q9QXK7 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Cpsf3Q9QXK7 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC2.55□□□□□ -2
Cpsf3Q9QXK7 AC104832.1-201ENSMUST00000222938 550 ntBASIC2.55□□□□□ -2
Cpsf3Q9QXK7 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.55□□□□□ -2
Cpsf3Q9QXK7 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.55□□□□□ -2
Cpsf3Q9QXK7 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
Cpsf3Q9QXK7 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Cpsf3Q9QXK7 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Gm25529-201ENSMUST00000104850 92 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Gm11363-201ENSMUST00000121672 548 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Gm23867-201ENSMUST00000122649 274 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Gm17148-201ENSMUST00000164702 249 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Gm24813-201ENSMUST00000175310 84 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Gm27220-201ENSMUST00000183453 262 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Gm28838-201ENSMUST00000186338 315 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Gm29635-201ENSMUST00000187221 315 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Gm29026-201ENSMUST00000187787 315 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Gm28797-201ENSMUST00000188543 315 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Gm28855-201ENSMUST00000188680 315 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Gm28705-201ENSMUST00000189548 315 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Gm28939-201ENSMUST00000190351 315 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Gm28223-201ENSMUST00000190469 315 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Gm29092-201ENSMUST00000190768 315 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Gm36953-201ENSMUST00000195295 268 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Gm43007-201ENSMUST00000197618 291 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Mir6925-201ENSMUST00000197857 70 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Gm44825-201ENSMUST00000207557 150 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Gm44598-201ENSMUST00000207566 150 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Gm45522-201ENSMUST00000210784 166 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 CT009718.4-201ENSMUST00000221881 109 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Olfr197-201ENSMUST00000080031 926 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Gm22443-201ENSMUST00000082890 107 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Gm25628-201ENSMUST00000084002 105 ntBASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Cpsf3Q9QXK7 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.53□□□□□ -2
Cpsf3Q9QXK7 Gm23472-201ENSMUST00000101806 191 ntBASIC2.53□□□□□ -2
Cpsf3Q9QXK7 Gm15714-201ENSMUST00000117168 250 ntBASIC2.53□□□□□ -2
Cpsf3Q9QXK7 Gm15896-201ENSMUST00000118045 440 ntBASIC2.53□□□□□ -2
Cpsf3Q9QXK7 Gm26105-201ENSMUST00000157253 190 ntBASIC2.53□□□□□ -2
Cpsf3Q9QXK7 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.53□□□□□ -2
Cpsf3Q9QXK7 Gm24497-201ENSMUST00000177868 191 ntBASIC2.53□□□□□ -2
Cpsf3Q9QXK7 Gm25939-201ENSMUST00000179876 191 ntBASIC2.53□□□□□ -2
Cpsf3Q9QXK7 Gm9892-201ENSMUST00000182415 992 ntBASIC2.53□□□□□ -2
Cpsf3Q9QXK7 Gm28744-201ENSMUST00000189939 340 ntBASIC2.53□□□□□ -2
Cpsf3Q9QXK7 Gm43286-201ENSMUST00000197420 424 ntBASIC2.53□□□□□ -2
Cpsf3Q9QXK7 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.53□□□□□ -2
Cpsf3Q9QXK7 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC2.53□□□□□ -2
Cpsf3Q9QXK7 Gm19118-201ENSMUST00000222554 98 ntBASIC2.53□□□□□ -2
Cpsf3Q9QXK7 Gm23444-201ENSMUST00000082922 191 ntBASIC2.53□□□□□ -2
Cpsf3Q9QXK7 Gm25579-201ENSMUST00000083407 106 ntBASIC2.53□□□□□ -2
Cpsf3Q9QXK7 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.53□□□□□ -2
Cpsf3Q9QXK7 AC117226.1-201ENSMUST00000221635 3737 ntBASIC2.53□□□□□ -2
Cpsf3Q9QXK7 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Cpsf3Q9QXK7 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.53□□□□□ -2
Cpsf3Q9QXK7 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.53□□□□□ -2
Cpsf3Q9QXK7 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.52□□□□□ -2.01
Cpsf3Q9QXK7 Gm25325-201ENSMUST00000122559 86 ntBASIC2.52□□□□□ -2.01
Cpsf3Q9QXK7 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC2.52□□□□□ -2.01
Cpsf3Q9QXK7 Gm16218-201ENSMUST00000155424 388 ntBASIC2.52□□□□□ -2.01
Cpsf3Q9QXK7 Gm24409-201ENSMUST00000157881 152 ntBASIC2.52□□□□□ -2.01
Cpsf3Q9QXK7 Gm24577-201ENSMUST00000158580 63 ntBASIC2.52□□□□□ -2.01
Cpsf3Q9QXK7 Gm24885-201ENSMUST00000158783 270 ntBASIC2.52□□□□□ -2.01
Cpsf3Q9QXK7 Gm23476-201ENSMUST00000158881 274 ntBASIC2.52□□□□□ -2.01
Cpsf3Q9QXK7 Mir3092-201ENSMUST00000174954 96 ntBASIC2.52□□□□□ -2.01
Cpsf3Q9QXK7 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC2.52□□□□□ -2.01
Cpsf3Q9QXK7 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Cpsf3Q9QXK7 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Cpsf3Q9QXK7 Gm9402-201ENSMUST00000196849 388 ntBASIC2.52□□□□□ -2.01
Cpsf3Q9QXK7 Gm6059-201ENSMUST00000196903 340 ntBASIC2.52□□□□□ -2.01
Cpsf3Q9QXK7 Gm43626-201ENSMUST00000198575 162 ntBASIC2.52□□□□□ -2.01
Cpsf3Q9QXK7 Gm7495-201ENSMUST00000215099 426 ntBASIC2.52□□□□□ -2.01
Cpsf3Q9QXK7 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC2.52□□□□□ -2.01
Cpsf3Q9QXK7 AC163357.1-201ENSMUST00000220847 233 ntBASIC2.52□□□□□ -2.01
Cpsf3Q9QXK7 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.52□□□□□ -2.01
Cpsf3Q9QXK7 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.52□□□□□ -2.01
Cpsf3Q9QXK7 Gm23627-201ENSMUST00000082459 107 ntBASIC2.52□□□□□ -2.01
Cpsf3Q9QXK7 Gm22502-201ENSMUST00000082488 107 ntBASIC2.52□□□□□ -2.01
Cpsf3Q9QXK7 Gm22977-201ENSMUST00000082615 107 ntBASIC2.52□□□□□ -2.01
Cpsf3Q9QXK7 Gm24149-201ENSMUST00000082757 107 ntBASIC2.52□□□□□ -2.01
Cpsf3Q9QXK7 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.52□□□□□ -2.01
Cpsf3Q9QXK7 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Cpsf3Q9QXK7 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.51□□□□□ -2.01
Cpsf3Q9QXK7 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.51□□□□□ -2.01
Cpsf3Q9QXK7 Gm13409-201ENSMUST00000122072 546 ntBASIC2.51□□□□□ -2.01
Cpsf3Q9QXK7 Gm24596-201ENSMUST00000122504 107 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms