Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC0.96□□□□□ -2.26
Trem3Q9JKE1 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC0.96□□□□□ -2.26
Trem3Q9JKE1 AC158521.1-201ENSMUST00000225295 660 ntBASIC0.96□□□□□ -2.26
Trem3Q9JKE1 AC133517.1-203ENSMUST00000225570 390 ntBASIC0.96□□□□□ -2.26
Trem3Q9JKE1 CT025538.2-201ENSMUST00000226083 772 ntBASIC0.96□□□□□ -2.26
Trem3Q9JKE1 CT025602.1-201ENSMUST00000227281 382 ntBASIC0.96□□□□□ -2.26
Trem3Q9JKE1 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
Trem3Q9JKE1 Gm23245-201ENSMUST00000083370 135 ntBASIC0.96□□□□□ -2.26
Trem3Q9JKE1 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
Trem3Q9JKE1 AC125532.1-201ENSMUST00000216210 2334 ntBASIC0.96□□□□□ -2.26
Trem3Q9JKE1 Gm44240-201ENSMUST00000204015 2654 ntBASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Gm24079-201ENSMUST00000104352 132 ntBASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Gm26147-201ENSMUST00000104479 114 ntBASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Anp32-ps-201ENSMUST00000118265 388 ntBASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Gm12639-201ENSMUST00000121400 493 ntBASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Mir1904-201ENSMUST00000122702 80 ntBASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Gm25115-201ENSMUST00000157187 140 ntBASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Gm23752-201ENSMUST00000157584 115 ntBASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Gm26363-201ENSMUST00000158866 83 ntBASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Gm23339-201ENSMUST00000158962 139 ntBASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Gm21827-201ENSMUST00000178247 423 ntBASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Gm25457-201ENSMUST00000179509 107 ntBASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Gm18357-201ENSMUST00000188184 580 ntBASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Gm43676-201ENSMUST00000197532 540 ntBASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Gm42958-201ENSMUST00000197595 318 ntBASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Gm31230-201ENSMUST00000199725 785 ntBASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Gm44125-201ENSMUST00000203068 448 ntBASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Gm22062-201ENSMUST00000082563 107 ntBASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
Trem3Q9JKE1 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
Trem3Q9JKE1 BC022960-201ENSMUST00000119987 1815 ntBASIC0.94□□□□□ -2.26
Trem3Q9JKE1 Gm13672-201ENSMUST00000117554 459 ntBASIC0.94□□□□□ -2.26
Trem3Q9JKE1 Gm12016-201ENSMUST00000119079 681 ntBASIC0.94□□□□□ -2.26
Trem3Q9JKE1 Gm6664-201ENSMUST00000119138 468 ntBASIC0.94□□□□□ -2.26
Trem3Q9JKE1 Gm24960-201ENSMUST00000157923 90 ntBASIC0.94□□□□□ -2.26
Trem3Q9JKE1 Gm24902-201ENSMUST00000158126 123 ntBASIC0.94□□□□□ -2.26
Trem3Q9JKE1 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC0.94□□□□□ -2.26
Trem3Q9JKE1 Gm22800-201ENSMUST00000175627 94 ntBASIC0.94□□□□□ -2.26
Trem3Q9JKE1 Gm27517-201ENSMUST00000184347 236 ntBASIC0.94□□□□□ -2.26
Trem3Q9JKE1 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC0.94□□□□□ -2.26
Trem3Q9JKE1 Gm36966-201ENSMUST00000192217 413 ntBASIC0.94□□□□□ -2.26
Trem3Q9JKE1 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC0.94□□□□□ -2.26
Trem3Q9JKE1 Gm43583-201ENSMUST00000199235 303 ntBASIC0.94□□□□□ -2.26
Trem3Q9JKE1 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
Trem3Q9JKE1 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC0.94□□□□□ -2.26
Trem3Q9JKE1 Gm44654-201ENSMUST00000208052 329 ntBASIC0.94□□□□□ -2.26
Trem3Q9JKE1 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC0.94□□□□□ -2.26
Trem3Q9JKE1 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC0.94□□□□□ -2.26
Trem3Q9JKE1 AC140477.1-201ENSMUST00000222354 246 ntBASIC0.94□□□□□ -2.26
Trem3Q9JKE1 AC239878.2-201ENSMUST00000224048 464 ntBASIC0.94□□□□□ -2.26
Trem3Q9JKE1 AL590614.1-201ENSMUST00000226037 268 ntBASIC0.94□□□□□ -2.26
Trem3Q9JKE1 AC113031.5-201ENSMUST00000227116 606 ntBASIC0.94□□□□□ -2.26
Trem3Q9JKE1 Gm26493-201ENSMUST00000083155 136 ntBASIC0.94□□□□□ -2.26
Trem3Q9JKE1 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
Trem3Q9JKE1 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC0.94□□□□□ -2.26
Trem3Q9JKE1 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC0.93□□□□□ -2.26
Trem3Q9JKE1 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Trem3Q9JKE1 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Trem3Q9JKE1 Gm22073-201ENSMUST00000122668 189 ntBASIC0.93□□□□□ -2.26
Trem3Q9JKE1 Gm23538-201ENSMUST00000157535 101 ntBASIC0.93□□□□□ -2.26
Trem3Q9JKE1 Gm22339-201ENSMUST00000157718 62 ntBASIC0.93□□□□□ -2.26
Trem3Q9JKE1 Mir1967-201ENSMUST00000157789 82 ntBASIC0.93□□□□□ -2.26
Trem3Q9JKE1 Gm22537-201ENSMUST00000158172 199 ntBASIC0.93□□□□□ -2.26
Trem3Q9JKE1 Gm22765-201ENSMUST00000158371 128 ntBASIC0.93□□□□□ -2.26
Trem3Q9JKE1 Gm22074-201ENSMUST00000158595 113 ntBASIC0.93□□□□□ -2.26
Trem3Q9JKE1 Mir3964-201ENSMUST00000174898 74 ntBASIC0.93□□□□□ -2.26
Trem3Q9JKE1 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
Trem3Q9JKE1 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Trem3Q9JKE1 Gm37162-201ENSMUST00000191708 551 ntBASIC0.93□□□□□ -2.26
Trem3Q9JKE1 Gm37319-201ENSMUST00000193500 636 ntBASIC0.93□□□□□ -2.26
Trem3Q9JKE1 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC0.93□□□□□ -2.26
Trem3Q9JKE1 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
Trem3Q9JKE1 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC0.93□□□□□ -2.26
Trem3Q9JKE1 Olfr1285-201ENSMUST00000208523 903 ntBASIC0.93□□□□□ -2.26
Trem3Q9JKE1 AC158597.1-201ENSMUST00000216234 150 ntBASIC0.93□□□□□ -2.26
Trem3Q9JKE1 Gm44562-201ENSMUST00000207194 1347 ntBASIC0.92□□□□□ -2.26
Trem3Q9JKE1 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Trem3Q9JKE1 Gm37096-201ENSMUST00000192317 2058 ntBASIC0.92□□□□□ -2.26
Trem3Q9JKE1 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Trem3Q9JKE1 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Trem3Q9JKE1 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC0.92□□□□□ -2.26
Trem3Q9JKE1 Gm14558-201ENSMUST00000117458 381 ntBASIC0.92□□□□□ -2.26
Trem3Q9JKE1 Gm14823-201ENSMUST00000117698 238 ntBASIC0.92□□□□□ -2.26
Trem3Q9JKE1 Mup-ps14-201ENSMUST00000118437 532 ntBASIC0.92□□□□□ -2.26
Trem3Q9JKE1 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC0.92□□□□□ -2.26
Trem3Q9JKE1 Gm11606-201ENSMUST00000120706 617 ntBASIC0.92□□□□□ -2.26
Trem3Q9JKE1 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Trem3Q9JKE1 Mup-ps2-201ENSMUST00000142602 533 ntBASIC0.92□□□□□ -2.26
Trem3Q9JKE1 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC0.92□□□□□ -2.26
Trem3Q9JKE1 Gm26089-201ENSMUST00000157898 107 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms