Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm22527-201ENSMUST00000158816 106 ntBASIC0.05□□□□□ -2.4
Smco4Q9JIS3 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC0.05□□□□□ -2.4
Smco4Q9JIS3 Mir7052-201ENSMUST00000184821 65 ntBASIC0.05□□□□□ -2.4
Smco4Q9JIS3 Mir6540-201ENSMUST00000184886 108 ntBASIC0.05□□□□□ -2.4
Smco4Q9JIS3 Gm29613-201ENSMUST00000185846 313 ntBASIC0.05□□□□□ -2.4
Smco4Q9JIS3 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC0.05□□□□□ -2.4
Smco4Q9JIS3 Gm29544-201ENSMUST00000188860 313 ntBASIC0.05□□□□□ -2.4
Smco4Q9JIS3 Gm28808-201ENSMUST00000190978 313 ntBASIC0.05□□□□□ -2.4
Smco4Q9JIS3 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC0.05□□□□□ -2.4
Smco4Q9JIS3 AL929285.1-201ENSMUST00000215522 229 ntBASIC0.05□□□□□ -2.4
Smco4Q9JIS3 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.05□□□□□ -2.4
Smco4Q9JIS3 CT030194.2-201ENSMUST00000225752 379 ntBASIC0.05□□□□□ -2.4
Smco4Q9JIS3 Gm23932-201ENSMUST00000082914 107 ntBASIC0.05□□□□□ -2.4
Smco4Q9JIS3 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
Smco4Q9JIS3 Gm14554-201ENSMUST00000119548 661 ntBASIC0.04□□□□□ -2.4
Smco4Q9JIS3 Gm22796-201ENSMUST00000157234 106 ntBASIC0.04□□□□□ -2.4
Smco4Q9JIS3 Gm2966-201ENSMUST00000166052 481 ntBASIC0.04□□□□□ -2.4
Smco4Q9JIS3 Gm25312-201ENSMUST00000178972 107 ntBASIC0.04□□□□□ -2.4
Smco4Q9JIS3 Mir6388-201ENSMUST00000184417 75 ntBASIC0.04□□□□□ -2.4
Smco4Q9JIS3 Trbv24-201ENSMUST00000194614 347 ntBASIC0.04□□□□□ -2.4
Smco4Q9JIS3 Gm45878-201ENSMUST00000211839 241 ntBASIC0.04□□□□□ -2.4
Smco4Q9JIS3 AC073947.3-201ENSMUST00000215576 766 ntBASIC0.04□□□□□ -2.4
Smco4Q9JIS3 Gm25038-201ENSMUST00000082928 130 ntBASIC0.04□□□□□ -2.4
Smco4Q9JIS3 Snord1a-201ENSMUST00000083160 74 ntBASIC0.04□□□□□ -2.4
Smco4Q9JIS3 Gm26082-201ENSMUST00000104070 127 ntBASIC0.03□□□□□ -2.4
Smco4Q9JIS3 n-R5s192-201ENSMUST00000122577 119 ntBASIC0.03□□□□□ -2.4
Smco4Q9JIS3 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
Smco4Q9JIS3 Gm22228-201ENSMUST00000157364 101 ntBASIC0.03□□□□□ -2.4
Smco4Q9JIS3 Gm29492-201ENSMUST00000187124 457 ntBASIC0.03□□□□□ -2.4
Smco4Q9JIS3 Mir3961-201ENSMUST00000198795 59 ntBASIC0.03□□□□□ -2.4
Smco4Q9JIS3 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC0.03□□□□□ -2.4
Smco4Q9JIS3 Gm25851-201ENSMUST00000082794 107 ntBASIC0.03□□□□□ -2.4
Smco4Q9JIS3 Gm26326-201ENSMUST00000083070 129 ntBASIC0.03□□□□□ -2.4
Smco4Q9JIS3 Gm14445-201ENSMUST00000117051 1484 ntBASIC0.03□□□□□ -2.41
Smco4Q9JIS3 Gm24079-201ENSMUST00000104352 132 ntBASIC0.02□□□□□ -2.41
Smco4Q9JIS3 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
Smco4Q9JIS3 Gm13406-201ENSMUST00000121991 256 ntBASIC0.02□□□□□ -2.41
Smco4Q9JIS3 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.02□□□□□ -2.41
Smco4Q9JIS3 Gm24419-201ENSMUST00000157875 332 ntBASIC0.02□□□□□ -2.41
Smco4Q9JIS3 Gm22706-201ENSMUST00000157907 112 ntBASIC0.02□□□□□ -2.41
Smco4Q9JIS3 Gm23277-201ENSMUST00000157914 136 ntBASIC0.02□□□□□ -2.41
Smco4Q9JIS3 Gm26358-201ENSMUST00000158215 97 ntBASIC0.02□□□□□ -2.41
Smco4Q9JIS3 Gm26285-201ENSMUST00000177923 107 ntBASIC0.02□□□□□ -2.41
Smco4Q9JIS3 Mir6372-201ENSMUST00000185114 109 ntBASIC0.02□□□□□ -2.41
Smco4Q9JIS3 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC0.02□□□□□ -2.41
Smco4Q9JIS3 CT025525.3-201ENSMUST00000228858 366 ntBASIC0.02□□□□□ -2.41
Smco4Q9JIS3 Gm23622-201ENSMUST00000082460 107 ntBASIC0.02□□□□□ -2.41
Smco4Q9JIS3 Gm14215-201ENSMUST00000120578 221 ntBASIC0.01□□□□□ -2.41
Smco4Q9JIS3 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC0.01□□□□□ -2.41
Smco4Q9JIS3 Gm25011-201ENSMUST00000158398 126 ntBASIC0.01□□□□□ -2.41
Smco4Q9JIS3 Mir1954-201ENSMUST00000175595 86 ntBASIC0.01□□□□□ -2.41
Smco4Q9JIS3 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC0.01□□□□□ -2.41
Smco4Q9JIS3 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.01□□□□□ -2.41
Smco4Q9JIS3 AC172027.1-201ENSMUST00000217659 337 ntBASIC0.01□□□□□ -2.41
Smco4Q9JIS3 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.01□□□□□ -2.41
Smco4Q9JIS3 Gm25378-201ENSMUST00000104333 129 ntBASIC0□□□□□ -2.41
Smco4Q9JIS3 Gm16400-201ENSMUST00000116523 1029 ntBASIC0□□□□□ -2.41
Smco4Q9JIS3 Gm25393-201ENSMUST00000157336 285 ntBASIC0□□□□□ -2.41
Smco4Q9JIS3 Gm27588-201ENSMUST00000185096 263 ntBASIC0□□□□□ -2.41
Smco4Q9JIS3 Gm28921-201ENSMUST00000190219 378 ntBASIC0□□□□□ -2.41
Smco4Q9JIS3 Gm44041-201ENSMUST00000203678 396 ntBASIC0□□□□□ -2.41
Smco4Q9JIS3 Gm44524-201ENSMUST00000203899 271 ntBASIC0□□□□□ -2.41
Smco4Q9JIS3 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC0□□□□□ -2.41
Smco4Q9JIS3 AC126043.1-201ENSMUST00000221304 1141 ntBASIC0□□□□□ -2.41
Smco4Q9JIS3 Gm44560-201ENSMUST00000207816 3115 ntBASIC-0□□□□□ -2.41
Smco4Q9JIS3 Mir710-201ENSMUST00000102088 110 ntBASIC-0.01□□□□□ -2.41
Smco4Q9JIS3 Mup-ps14-201ENSMUST00000118437 532 ntBASIC-0.01□□□□□ -2.41
Smco4Q9JIS3 Gm14793-201ENSMUST00000118739 311 ntBASIC-0.01□□□□□ -2.41
Smco4Q9JIS3 Gm12640-201ENSMUST00000120097 310 ntBASIC-0.01□□□□□ -2.41
Smco4Q9JIS3 n-R5s18-201ENSMUST00000122740 121 ntBASIC-0.01□□□□□ -2.41
Smco4Q9JIS3 Mup-ps2-201ENSMUST00000142602 533 ntBASIC-0.01□□□□□ -2.41
Smco4Q9JIS3 Gm28435-201ENSMUST00000185496 108 ntBASIC-0.01□□□□□ -2.41
Smco4Q9JIS3 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC-0.01□□□□□ -2.41
Smco4Q9JIS3 Gm42739-201ENSMUST00000200687 226 ntBASIC-0.01□□□□□ -2.41
Smco4Q9JIS3 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC-0.01□□□□□ -2.41
Smco4Q9JIS3 Gm45240-201ENSMUST00000211437 674 ntBASIC-0.01□□□□□ -2.41
Smco4Q9JIS3 Gm45704-201ENSMUST00000212582 403 ntBASIC-0.01□□□□□ -2.41
Smco4Q9JIS3 CT009733.1-201ENSMUST00000225322 425 ntBASIC-0.01□□□□□ -2.41
Smco4Q9JIS3 DQ267101-201ENSMUST00000082562 73 ntBASIC-0.01□□□□□ -2.41
Smco4Q9JIS3 Gm26175-201ENSMUST00000083794 131 ntBASIC-0.01□□□□□ -2.41
Smco4Q9JIS3 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC-0.01□□□□□ -2.41
Smco4Q9JIS3 Gm22936-201ENSMUST00000103955 126 ntBASIC-0.02□□□□□ -2.41
Smco4Q9JIS3 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
Smco4Q9JIS3 Gm15223-201ENSMUST00000120989 826 ntBASIC-0.02□□□□□ -2.41
Smco4Q9JIS3 Gm23208-201ENSMUST00000158666 127 ntBASIC-0.02□□□□□ -2.41
Smco4Q9JIS3 Gm9022-202ENSMUST00000183285 483 ntBASIC-0.02□□□□□ -2.41
Smco4Q9JIS3 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC-0.02□□□□□ -2.41
Smco4Q9JIS3 CT009733.1-203ENSMUST00000224033 451 ntBASIC-0.02□□□□□ -2.41
Smco4Q9JIS3 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC-0.03□□□□□ -2.41
Smco4Q9JIS3 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC-0.03□□□□□ -2.41
Smco4Q9JIS3 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
Smco4Q9JIS3 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
Smco4Q9JIS3 Gm13992-201ENSMUST00000120558 156 ntBASIC-0.03□□□□□ -2.41
Smco4Q9JIS3 Gm24963-201ENSMUST00000157916 144 ntBASIC-0.03□□□□□ -2.41
Smco4Q9JIS3 Gm23761-201ENSMUST00000158347 104 ntBASIC-0.03□□□□□ -2.41
Smco4Q9JIS3 Gm17204-201ENSMUST00000167936 478 ntBASIC-0.03□□□□□ -2.41
Smco4Q9JIS3 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC-0.03□□□□□ -2.41
Smco4Q9JIS3 Gm27420-201ENSMUST00000183823 79 ntBASIC-0.03□□□□□ -2.41
Smco4Q9JIS3 Gm27894-201ENSMUST00000184177 92 ntBASIC-0.03□□□□□ -2.41
Smco4Q9JIS3 Gm28409-201ENSMUST00000187064 103 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms