Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trim54Q9ERP3 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Trim54Q9ERP3 Gm20345-201ENSMUST00000175839 2414 ntBASIC3.02□□□□□ -1.93
Trim54Q9ERP3 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
Trim54Q9ERP3 Defa-ps13-201ENSMUST00000120695 204 ntBASIC3.02□□□□□ -1.93
Trim54Q9ERP3 Gm14069-201ENSMUST00000120815 229 ntBASIC3.02□□□□□ -1.93
Trim54Q9ERP3 Gm14821-201ENSMUST00000121975 435 ntBASIC3.02□□□□□ -1.93
Trim54Q9ERP3 DQ267100-201ENSMUST00000122600 72 ntBASIC3.02□□□□□ -1.93
Trim54Q9ERP3 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC3.02□□□□□ -1.93
Trim54Q9ERP3 Gm25153-201ENSMUST00000157118 156 ntBASIC3.02□□□□□ -1.93
Trim54Q9ERP3 Gm24443-201ENSMUST00000157242 132 ntBASIC3.02□□□□□ -1.93
Trim54Q9ERP3 Gm24737-201ENSMUST00000158861 100 ntBASIC3.02□□□□□ -1.93
Trim54Q9ERP3 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Trim54Q9ERP3 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC3.02□□□□□ -1.93
Trim54Q9ERP3 Gm21893-201ENSMUST00000179119 397 ntBASIC3.02□□□□□ -1.93
Trim54Q9ERP3 Gm23793-201ENSMUST00000179396 117 ntBASIC3.02□□□□□ -1.93
Trim54Q9ERP3 Gm44476-201ENSMUST00000196225 91 ntBASIC3.02□□□□□ -1.93
Trim54Q9ERP3 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.02□□□□□ -1.93
Trim54Q9ERP3 Gm43393-201ENSMUST00000200147 194 ntBASIC3.02□□□□□ -1.93
Trim54Q9ERP3 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC3.02□□□□□ -1.93
Trim54Q9ERP3 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Trim54Q9ERP3 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.02□□□□□ -1.93
Trim54Q9ERP3 Gm26164-201ENSMUST00000083793 104 ntBASIC3.02□□□□□ -1.93
Trim54Q9ERP3 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Trim54Q9ERP3 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Trim54Q9ERP3 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC3.02□□□□□ -1.93
Trim54Q9ERP3 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.01□□□□□ -1.93
Trim54Q9ERP3 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.01□□□□□ -1.93
Trim54Q9ERP3 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.01□□□□□ -1.93
Trim54Q9ERP3 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.01□□□□□ -1.93
Trim54Q9ERP3 Gm24275-201ENSMUST00000116780 146 ntBASIC3.01□□□□□ -1.93
Trim54Q9ERP3 Gm13457-201ENSMUST00000117885 267 ntBASIC3.01□□□□□ -1.93
Trim54Q9ERP3 Gm9850-201ENSMUST00000117916 227 ntBASIC3.01□□□□□ -1.93
Trim54Q9ERP3 Gm14307-201ENSMUST00000118930 291 ntBASIC3.01□□□□□ -1.93
Trim54Q9ERP3 Gm13210-201ENSMUST00000121483 273 ntBASIC3.01□□□□□ -1.93
Trim54Q9ERP3 Gm15065-201ENSMUST00000121699 273 ntBASIC3.01□□□□□ -1.93
Trim54Q9ERP3 Gm11414-201ENSMUST00000121795 263 ntBASIC3.01□□□□□ -1.93
Trim54Q9ERP3 Gm14297-201ENSMUST00000129110 291 ntBASIC3.01□□□□□ -1.93
Trim54Q9ERP3 Gm27926-201ENSMUST00000157180 66 ntBASIC3.01□□□□□ -1.93
Trim54Q9ERP3 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Trim54Q9ERP3 Mir3076-201ENSMUST00000175415 60 ntBASIC3.01□□□□□ -1.93
Trim54Q9ERP3 Gm5329-201ENSMUST00000186898 463 ntBASIC3.01□□□□□ -1.93
Trim54Q9ERP3 Gm30341-201ENSMUST00000194363 289 ntBASIC3.01□□□□□ -1.93
Trim54Q9ERP3 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.01□□□□□ -1.93
Trim54Q9ERP3 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC3.01□□□□□ -1.93
Trim54Q9ERP3 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.01□□□□□ -1.93
Trim54Q9ERP3 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.01□□□□□ -1.93
Trim54Q9ERP3 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.01□□□□□ -1.93
Trim54Q9ERP3 Gm10088-201ENSMUST00000074116 423 ntBASIC3.01□□□□□ -1.93
Trim54Q9ERP3 Gm25202-201ENSMUST00000082838 191 ntBASIC3.01□□□□□ -1.93
Trim54Q9ERP3 Gm23721-201ENSMUST00000083005 107 ntBASIC3.01□□□□□ -1.93
Trim54Q9ERP3 Snord7-201ENSMUST00000083781 97 ntBASIC3.01□□□□□ -1.93
Trim54Q9ERP3 Gm26111-201ENSMUST00000083969 106 ntBASIC3.01□□□□□ -1.93
Trim54Q9ERP3 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.01□□□□□ -1.93
Trim54Q9ERP3 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Trim54Q9ERP3 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3□□□□□ -1.93
Trim54Q9ERP3 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Trim54Q9ERP3 Mir759-201ENSMUST00000103254 98 ntBASIC3□□□□□ -1.93
Trim54Q9ERP3 Gm22658-201ENSMUST00000104196 155 ntBASIC3□□□□□ -1.93
Trim54Q9ERP3 Gm22021-201ENSMUST00000104353 107 ntBASIC3□□□□□ -1.93
Trim54Q9ERP3 Gm15272-201ENSMUST00000120865 233 ntBASIC3□□□□□ -1.93
Trim54Q9ERP3 Gm23213-201ENSMUST00000122715 313 ntBASIC3□□□□□ -1.93
Trim54Q9ERP3 Gm22037-201ENSMUST00000157280 296 ntBASIC3□□□□□ -1.93
Trim54Q9ERP3 Gm25384-201ENSMUST00000157807 105 ntBASIC3□□□□□ -1.93
Trim54Q9ERP3 Mir3103-201ENSMUST00000175474 67 ntBASIC3□□□□□ -1.93
Trim54Q9ERP3 Snord93-201ENSMUST00000175580 71 ntBASIC3□□□□□ -1.93
Trim54Q9ERP3 Gm23933-201ENSMUST00000178405 79 ntBASIC3□□□□□ -1.93
Trim54Q9ERP3 Mir7242-201ENSMUST00000183710 79 ntBASIC3□□□□□ -1.93
Trim54Q9ERP3 Gm27470-201ENSMUST00000184070 210 ntBASIC3□□□□□ -1.93
Trim54Q9ERP3 Gm27582-201ENSMUST00000184084 126 ntBASIC3□□□□□ -1.93
Trim54Q9ERP3 AC154296.1-201ENSMUST00000198150 67 ntBASIC3□□□□□ -1.93
Trim54Q9ERP3 Mir9-1-201ENSMUST00000199907 89 ntBASIC3□□□□□ -1.93
Trim54Q9ERP3 Gm44256-201ENSMUST00000203304 335 ntBASIC3□□□□□ -1.93
Trim54Q9ERP3 AC164297.3-201ENSMUST00000224238 94 ntBASIC3□□□□□ -1.93
Trim54Q9ERP3 AC165106.2-201ENSMUST00000226749 97 ntBASIC3□□□□□ -1.93
Trim54Q9ERP3 AC160550.3-201ENSMUST00000226818 400 ntBASIC3□□□□□ -1.93
Trim54Q9ERP3 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Trim54Q9ERP3 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trim54Q9ERP3 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
Trim54Q9ERP3 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3□□□□□ -1.93
Trim54Q9ERP3 Gm36989-201ENSMUST00000193225 2160 ntBASIC3□□□□□ -1.93
Trim54Q9ERP3 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3□□□□□ -1.93
Trim54Q9ERP3 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Gm12213-201ENSMUST00000119924 353 ntBASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Gm11254-201ENSMUST00000122368 653 ntBASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Gm22073-201ENSMUST00000122668 189 ntBASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Gm26277-201ENSMUST00000157097 152 ntBASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Gm22839-201ENSMUST00000158436 304 ntBASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Gm24922-201ENSMUST00000158511 102 ntBASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Gm24085-201ENSMUST00000175172 116 ntBASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC2.99□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms