Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm17113-201ENSMUST00000170118 171 ntBASIC1.47□□□□□ -2.17
Lima1Q9ERG0 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC1.47□□□□□ -2.17
Lima1Q9ERG0 Gm29603-201ENSMUST00000186792 334 ntBASIC1.47□□□□□ -2.17
Lima1Q9ERG0 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.47□□□□□ -2.17
Lima1Q9ERG0 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC1.47□□□□□ -2.17
Lima1Q9ERG0 Gm37757-201ENSMUST00000193072 210 ntBASIC1.47□□□□□ -2.17
Lima1Q9ERG0 Gm37054-201ENSMUST00000193481 543 ntBASIC1.47□□□□□ -2.17
Lima1Q9ERG0 Gm38146-201ENSMUST00000194121 1293 ntBASIC1.47□□□□□ -2.17
Lima1Q9ERG0 Gm8747-201ENSMUST00000195392 751 ntBASIC1.47□□□□□ -2.17
Lima1Q9ERG0 Gm9236-201ENSMUST00000196892 587 ntBASIC1.47□□□□□ -2.17
Lima1Q9ERG0 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.47□□□□□ -2.17
Lima1Q9ERG0 Gm25582-201ENSMUST00000083412 110 ntBASIC1.47□□□□□ -2.17
Lima1Q9ERG0 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.47□□□□□ -2.17
Lima1Q9ERG0 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
Lima1Q9ERG0 Gm11849-201ENSMUST00000121293 261 ntBASIC1.46□□□□□ -2.18
Lima1Q9ERG0 Gm22073-201ENSMUST00000122668 189 ntBASIC1.46□□□□□ -2.18
Lima1Q9ERG0 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC1.46□□□□□ -2.18
Lima1Q9ERG0 Gm25625-201ENSMUST00000157221 96 ntBASIC1.46□□□□□ -2.18
Lima1Q9ERG0 Gm22315-201ENSMUST00000158010 143 ntBASIC1.46□□□□□ -2.18
Lima1Q9ERG0 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.46□□□□□ -2.18
Lima1Q9ERG0 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Lima1Q9ERG0 Snord87-201ENSMUST00000175437 87 ntBASIC1.46□□□□□ -2.18
Lima1Q9ERG0 Gm23568-201ENSMUST00000177960 92 ntBASIC1.46□□□□□ -2.18
Lima1Q9ERG0 Gm21827-201ENSMUST00000178247 423 ntBASIC1.46□□□□□ -2.18
Lima1Q9ERG0 Gm24829-201ENSMUST00000179245 92 ntBASIC1.46□□□□□ -2.18
Lima1Q9ERG0 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC1.46□□□□□ -2.18
Lima1Q9ERG0 Gm21673-201ENSMUST00000186640 436 ntBASIC1.46□□□□□ -2.18
Lima1Q9ERG0 Gm28453-203ENSMUST00000187041 189 ntBASIC1.46□□□□□ -2.18
Lima1Q9ERG0 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.46□□□□□ -2.18
Lima1Q9ERG0 Gm21135-201ENSMUST00000189023 436 ntBASIC1.46□□□□□ -2.18
Lima1Q9ERG0 Gm29657-201ENSMUST00000189807 342 ntBASIC1.46□□□□□ -2.18
Lima1Q9ERG0 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.46□□□□□ -2.18
Lima1Q9ERG0 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Lima1Q9ERG0 Gm17991-201ENSMUST00000208139 297 ntBASIC1.46□□□□□ -2.18
Lima1Q9ERG0 Gm45296-201ENSMUST00000209625 205 ntBASIC1.46□□□□□ -2.18
Lima1Q9ERG0 AC101677.1-201ENSMUST00000218590 158 ntBASIC1.46□□□□□ -2.18
Lima1Q9ERG0 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.46□□□□□ -2.18
Lima1Q9ERG0 Gm10360-201ENSMUST00000097219 272 ntBASIC1.46□□□□□ -2.18
Lima1Q9ERG0 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Lima1Q9ERG0 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Gm13378-201ENSMUST00000117483 336 ntBASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Gm22217-201ENSMUST00000157556 313 ntBASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Gm24439-201ENSMUST00000157894 117 ntBASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Gm22316-201ENSMUST00000158012 216 ntBASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Gm23068-201ENSMUST00000158239 293 ntBASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Gm16588-201ENSMUST00000162889 355 ntBASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Gm27588-201ENSMUST00000185096 263 ntBASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Gm28917-201ENSMUST00000187294 237 ntBASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Gm28404-201ENSMUST00000190242 453 ntBASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Gm28766-201ENSMUST00000191086 234 ntBASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Trbv24-201ENSMUST00000194614 347 ntBASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Gm29848-201ENSMUST00000203107 295 ntBASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC1.45□□□□□ -2.18
Lima1Q9ERG0 AL450317.1-201ENSMUST00000213941 291 ntBASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Gm18703-201ENSMUST00000215318 333 ntBASIC1.45□□□□□ -2.18
Lima1Q9ERG0 AC112274.2-201ENSMUST00000218436 170 ntBASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Gm46312-201ENSMUST00000220961 420 ntBASIC1.45□□□□□ -2.18
Lima1Q9ERG0 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Gm18617-201ENSMUST00000222311 259 ntBASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Gm26446-201ENSMUST00000082455 103 ntBASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Gm23517-201ENSMUST00000082830 192 ntBASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Mir320-201ENSMUST00000083594 82 ntBASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Lima1Q9ERG0 Gm44821-201ENSMUST00000208212 2002 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Gm23010-201ENSMUST00000104151 126 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Gm13356-201ENSMUST00000121678 335 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Gm22236-201ENSMUST00000157093 106 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Gm22082-201ENSMUST00000157587 161 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Gm27396-201ENSMUST00000157708 58 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Gm25706-201ENSMUST00000157828 247 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Gm24997-201ENSMUST00000157910 105 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Gm23221-201ENSMUST00000158118 93 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Gm28560-201ENSMUST00000186091 315 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Gm28334-201ENSMUST00000186653 315 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Gm10193-201ENSMUST00000188288 231 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Gm28495-201ENSMUST00000188452 315 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Gm28232-201ENSMUST00000188683 315 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Gm28481-201ENSMUST00000189231 315 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Gm29059-201ENSMUST00000191534 315 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Gm37765-201ENSMUST00000192395 315 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Gm37237-201ENSMUST00000192893 315 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Gm36968-201ENSMUST00000193737 315 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Gm38290-201ENSMUST00000195238 315 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Mir3068-202ENSMUST00000197755 79 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Gm7692-201ENSMUST00000213534 409 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms