Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm22841-201ENSMUST00000158443 62 ntBASIC2.27□□□□□ -2.05
Scn4aQ9ER60 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.27□□□□□ -2.05
Scn4aQ9ER60 Gm23636-201ENSMUST00000175070 95 ntBASIC2.27□□□□□ -2.05
Scn4aQ9ER60 Gm29216-201ENSMUST00000187117 492 ntBASIC2.27□□□□□ -2.05
Scn4aQ9ER60 Gm37641-201ENSMUST00000193837 239 ntBASIC2.27□□□□□ -2.05
Scn4aQ9ER60 Trbv24-201ENSMUST00000194614 347 ntBASIC2.27□□□□□ -2.05
Scn4aQ9ER60 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC2.27□□□□□ -2.05
Scn4aQ9ER60 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm14835-201ENSMUST00000119039 315 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm23122-201ENSMUST00000157645 103 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm23317-201ENSMUST00000157999 129 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm21744-201ENSMUST00000178403 662 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm25670-201ENSMUST00000178423 107 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm26239-201ENSMUST00000178842 107 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm21171-201ENSMUST00000180048 673 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm29413-201ENSMUST00000186019 880 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm28700-201ENSMUST00000187614 579 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm29639-201ENSMUST00000188375 580 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm28843-201ENSMUST00000189198 678 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm29546-201ENSMUST00000191171 678 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm42647-201ENSMUST00000195939 459 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm23370-202ENSMUST00000197008 129 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm44478-201ENSMUST00000204875 114 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC2.26□□□□□ -2.05
Scn4aQ9ER60 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 AC101677.1-201ENSMUST00000218590 158 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 AC156560.1-201ENSMUST00000221425 256 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.26□□□□□ -2.05
Scn4aQ9ER60 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm24292-201ENSMUST00000082888 107 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm24406-201ENSMUST00000083026 128 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm13913-201ENSMUST00000121126 260 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm15167-201ENSMUST00000121997 187 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm12045-201ENSMUST00000122122 573 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm23212-201ENSMUST00000122718 60 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm22985-201ENSMUST00000122754 116 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm17161-201ENSMUST00000169187 524 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm18417-201ENSMUST00000176564 648 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Mir6335-201ENSMUST00000184081 98 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm27493-201ENSMUST00000184128 78 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm29073-201ENSMUST00000185563 664 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm29165-201ENSMUST00000190655 664 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm29211-201ENSMUST00000191470 664 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm37000-201ENSMUST00000193058 428 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Mir208a-201ENSMUST00000083498 83 ntBASIC2.26□□□□□ -2.05
Scn4aQ9ER60 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
Scn4aQ9ER60 Gm11784-201ENSMUST00000118568 474 ntBASIC2.25□□□□□ -2.05
Scn4aQ9ER60 Gm11248-201ENSMUST00000119568 201 ntBASIC2.25□□□□□ -2.05
Scn4aQ9ER60 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.25□□□□□ -2.05
Scn4aQ9ER60 Gm12721-201ENSMUST00000120621 268 ntBASIC2.25□□□□□ -2.05
Scn4aQ9ER60 Gm22611-201ENSMUST00000158288 150 ntBASIC2.25□□□□□ -2.05
Scn4aQ9ER60 Mir3964-201ENSMUST00000174898 74 ntBASIC2.25□□□□□ -2.05
Scn4aQ9ER60 Gm33354-201ENSMUST00000195448 906 ntBASIC2.25□□□□□ -2.05
Scn4aQ9ER60 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.25□□□□□ -2.05
Scn4aQ9ER60 AC134334.1-201ENSMUST00000214277 255 ntBASIC2.25□□□□□ -2.05
Scn4aQ9ER60 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.25□□□□□ -2.05
Scn4aQ9ER60 Gm23727-201ENSMUST00000083352 164 ntBASIC2.25□□□□□ -2.05
Scn4aQ9ER60 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
Scn4aQ9ER60 AC134917.1-201ENSMUST00000220517 1449 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm22780-201ENSMUST00000104084 132 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm13806-201ENSMUST00000117822 325 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm13876-201ENSMUST00000118451 261 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm6829-201ENSMUST00000119858 360 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm11407-201ENSMUST00000120362 1058 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm23752-201ENSMUST00000157584 115 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm23025-201ENSMUST00000158769 111 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm19066-201ENSMUST00000193232 1078 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm42834-201ENSMUST00000196845 256 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Scn4aQ9ER60 AC120553.1-201ENSMUST00000227313 260 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm26504-201ENSMUST00000102033 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm25526-201ENSMUST00000104332 132 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm13903-201ENSMUST00000120945 193 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm3111-201ENSMUST00000167426 490 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm22290-201ENSMUST00000177655 107 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm26502-201ENSMUST00000177732 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Snord116l13-201ENSMUST00000177737 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm25350-201ENSMUST00000177849 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Snord116l15-201ENSMUST00000177940 94 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms