Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm7329-201ENSMUST00000185915 210 ntBASIC0.5□□□□□ -2.33
Cpsf1Q9EPU4 Gm37399-201ENSMUST00000195224 416 ntBASIC0.5□□□□□ -2.33
Cpsf1Q9EPU4 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
Cpsf1Q9EPU4 Gm25544-201ENSMUST00000122676 120 ntBASIC0.49□□□□□ -2.33
Cpsf1Q9EPU4 Gm23466-201ENSMUST00000157133 106 ntBASIC0.49□□□□□ -2.33
Cpsf1Q9EPU4 Gm22418-201ENSMUST00000180326 107 ntBASIC0.49□□□□□ -2.33
Cpsf1Q9EPU4 CT009764.1-201ENSMUST00000222260 483 ntBASIC0.49□□□□□ -2.33
Cpsf1Q9EPU4 Gm10298-201ENSMUST00000074801 265 ntBASIC0.49□□□□□ -2.33
Cpsf1Q9EPU4 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
Cpsf1Q9EPU4 Snord116l9-201ENSMUST00000101891 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Gm26504-201ENSMUST00000102033 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Mir599-201ENSMUST00000102378 88 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Gm25718-201ENSMUST00000158632 118 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Gm26502-201ENSMUST00000177732 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Snord116l13-201ENSMUST00000177737 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Gm25350-201ENSMUST00000177849 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Snord116l15-201ENSMUST00000177940 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Gm23446-201ENSMUST00000177977 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Snord116l4-201ENSMUST00000177982 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Gm26201-201ENSMUST00000178047 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Gm24711-201ENSMUST00000178062 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Gm24609-201ENSMUST00000178166 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Gm23265-201ENSMUST00000178321 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Gm22812-201ENSMUST00000178329 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Snord116l3-201ENSMUST00000178370 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Gm26246-201ENSMUST00000178388 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Gm25155-201ENSMUST00000178450 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Gm24760-201ENSMUST00000178530 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Gm22285-201ENSMUST00000178576 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Gm22417-201ENSMUST00000178656 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Snord116l2-201ENSMUST00000178675 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Gm26270-201ENSMUST00000178690 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Snord116l16-201ENSMUST00000178777 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Gm23313-201ENSMUST00000178931 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Snord116l17-201ENSMUST00000178936 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Gm23089-201ENSMUST00000178947 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Snord116l10-201ENSMUST00000179053 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Gm24153-201ENSMUST00000179280 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Gm25597-201ENSMUST00000179388 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Snord116l1-201ENSMUST00000179518 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Gm25816-201ENSMUST00000179764 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Snord116l8-201ENSMUST00000179889 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Snord116l7-201ENSMUST00000179895 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Snord116l5-201ENSMUST00000179927 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Snord116l6-201ENSMUST00000179955 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Gm26188-201ENSMUST00000179963 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Gm26433-201ENSMUST00000180227 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Snord116l11-201ENSMUST00000180312 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Gm22128-201ENSMUST00000180346 94 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Mir7683-201ENSMUST00000183842 61 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 CT030194.2-201ENSMUST00000225752 379 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 AC133176.1-201ENSMUST00000226668 219 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Mir141-201ENSMUST00000083540 72 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Gm23040-201ENSMUST00000083869 163 ntBASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
Cpsf1Q9EPU4 Gm15126-201ENSMUST00000118631 833 ntBASIC0.47□□□□□ -2.33
Cpsf1Q9EPU4 Gm26101-201ENSMUST00000157246 105 ntBASIC0.47□□□□□ -2.33
Cpsf1Q9EPU4 Gm25885-201ENSMUST00000157779 109 ntBASIC0.47□□□□□ -2.33
Cpsf1Q9EPU4 Gm25711-201ENSMUST00000158633 128 ntBASIC0.47□□□□□ -2.33
Cpsf1Q9EPU4 Gm29950-201ENSMUST00000195273 237 ntBASIC0.47□□□□□ -2.33
Cpsf1Q9EPU4 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.47□□□□□ -2.33
Cpsf1Q9EPU4 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.47□□□□□ -2.33
Cpsf1Q9EPU4 AC102352.1-201ENSMUST00000224187 582 ntBASIC0.47□□□□□ -2.33
Cpsf1Q9EPU4 Gm10038-201ENSMUST00000077233 441 ntBASIC0.47□□□□□ -2.33
Cpsf1Q9EPU4 Gm24552-201ENSMUST00000158646 103 ntBASIC0.47□□□□□ -2.33
Cpsf1Q9EPU4 Gm17052-201ENSMUST00000165496 289 ntBASIC0.47□□□□□ -2.33
Cpsf1Q9EPU4 Gm24333-201ENSMUST00000175101 84 ntBASIC0.47□□□□□ -2.33
Cpsf1Q9EPU4 Gm29647-201ENSMUST00000188795 666 ntBASIC0.47□□□□□ -2.33
Cpsf1Q9EPU4 Gm28504-201ENSMUST00000190977 666 ntBASIC0.47□□□□□ -2.33
Cpsf1Q9EPU4 Gm18956-201ENSMUST00000192857 480 ntBASIC0.47□□□□□ -2.33
Cpsf1Q9EPU4 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
Cpsf1Q9EPU4 Gm44655-201ENSMUST00000207768 423 ntBASIC0.47□□□□□ -2.33
Cpsf1Q9EPU4 AC156952.1-201ENSMUST00000220361 793 ntBASIC0.47□□□□□ -2.33
Cpsf1Q9EPU4 Gm23924-201ENSMUST00000082474 108 ntBASIC0.47□□□□□ -2.33
Cpsf1Q9EPU4 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
Cpsf1Q9EPU4 Gm13731-201ENSMUST00000117332 196 ntBASIC0.46□□□□□ -2.34
Cpsf1Q9EPU4 Gm14761-201ENSMUST00000121363 262 ntBASIC0.46□□□□□ -2.34
Cpsf1Q9EPU4 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC0.46□□□□□ -2.34
Cpsf1Q9EPU4 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC0.46□□□□□ -2.34
Cpsf1Q9EPU4 Gm20541-201ENSMUST00000173035 1406 ntBASIC0.46□□□□□ -2.34
Cpsf1Q9EPU4 Gm26116-201ENSMUST00000175600 77 ntBASIC0.46□□□□□ -2.34
Cpsf1Q9EPU4 Mir6341-201ENSMUST00000183490 121 ntBASIC0.46□□□□□ -2.34
Cpsf1Q9EPU4 Gm43007-201ENSMUST00000197618 291 ntBASIC0.46□□□□□ -2.34
Cpsf1Q9EPU4 Gm29754-201ENSMUST00000206269 358 ntBASIC0.46□□□□□ -2.34
Cpsf1Q9EPU4 Gm44654-201ENSMUST00000208052 329 ntBASIC0.46□□□□□ -2.34
Cpsf1Q9EPU4 AC154521.1-201ENSMUST00000222635 330 ntBASIC0.46□□□□□ -2.34
Cpsf1Q9EPU4 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.46□□□□□ -2.34
Cpsf1Q9EPU4 AC121960.3-201ENSMUST00000227077 623 ntBASIC0.46□□□□□ -2.34
Cpsf1Q9EPU4 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
Cpsf1Q9EPU4 Gm14918-201ENSMUST00000118153 268 ntBASIC0.45□□□□□ -2.34
Cpsf1Q9EPU4 Gm11252-201ENSMUST00000120572 939 ntBASIC0.45□□□□□ -2.34
Cpsf1Q9EPU4 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.45□□□□□ -2.34
Cpsf1Q9EPU4 Gm22382-201ENSMUST00000158185 130 ntBASIC0.45□□□□□ -2.34
Cpsf1Q9EPU4 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
Cpsf1Q9EPU4 Mir3057-201ENSMUST00000175040 91 ntBASIC0.45□□□□□ -2.34
Cpsf1Q9EPU4 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms