Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm25869-201ENSMUST00000083855 107 ntBASIC0.1□□□□□ -2.39
Hmgn3Q9DCB1 Gm24693-201ENSMUST00000083885 107 ntBASIC0.1□□□□□ -2.39
Hmgn3Q9DCB1 Gm26317-201ENSMUST00000083894 107 ntBASIC0.1□□□□□ -2.39
Hmgn3Q9DCB1 Gm22798-201ENSMUST00000083992 107 ntBASIC0.1□□□□□ -2.39
Hmgn3Q9DCB1 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
Hmgn3Q9DCB1 Gm26427-201ENSMUST00000093648 107 ntBASIC0.1□□□□□ -2.39
Hmgn3Q9DCB1 Gm22170-201ENSMUST00000097247 107 ntBASIC0.1□□□□□ -2.39
Hmgn3Q9DCB1 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC0.1□□□□□ -2.39
Hmgn3Q9DCB1 Gm14774-201ENSMUST00000117857 536 ntBASIC0.09□□□□□ -2.4
Hmgn3Q9DCB1 Gm14623-201ENSMUST00000121398 603 ntBASIC0.09□□□□□ -2.4
Hmgn3Q9DCB1 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.09□□□□□ -2.4
Hmgn3Q9DCB1 Gm26484-201ENSMUST00000158018 106 ntBASIC0.09□□□□□ -2.4
Hmgn3Q9DCB1 Gm24086-201ENSMUST00000175171 98 ntBASIC0.09□□□□□ -2.4
Hmgn3Q9DCB1 Mir6985-201ENSMUST00000184641 61 ntBASIC0.09□□□□□ -2.4
Hmgn3Q9DCB1 Mir6419-201ENSMUST00000184784 113 ntBASIC0.09□□□□□ -2.4
Hmgn3Q9DCB1 Gm43007-201ENSMUST00000197618 291 ntBASIC0.09□□□□□ -2.4
Hmgn3Q9DCB1 Gm17937-201ENSMUST00000197908 742 ntBASIC0.09□□□□□ -2.4
Hmgn3Q9DCB1 Gm43531-201ENSMUST00000200676 1114 ntBASIC0.09□□□□□ -2.4
Hmgn3Q9DCB1 Gm45636-201ENSMUST00000210497 1064 ntBASIC0.09□□□□□ -2.4
Hmgn3Q9DCB1 AC134334.1-201ENSMUST00000214277 255 ntBASIC0.09□□□□□ -2.4
Hmgn3Q9DCB1 Gm26224-201ENSMUST00000082506 80 ntBASIC0.09□□□□□ -2.4
Hmgn3Q9DCB1 Gm26176-201ENSMUST00000083795 105 ntBASIC0.09□□□□□ -2.4
Hmgn3Q9DCB1 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.09□□□□□ -2.4
Hmgn3Q9DCB1 Mir667-201ENSMUST00000102441 92 ntBASIC0.08□□□□□ -2.4
Hmgn3Q9DCB1 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
Hmgn3Q9DCB1 Gm16431-201ENSMUST00000117454 431 ntBASIC0.08□□□□□ -2.4
Hmgn3Q9DCB1 Gm12392-201ENSMUST00000118014 938 ntBASIC0.08□□□□□ -2.4
Hmgn3Q9DCB1 Gm11862-201ENSMUST00000119678 659 ntBASIC0.08□□□□□ -2.4
Hmgn3Q9DCB1 Gm24379-201ENSMUST00000122695 86 ntBASIC0.08□□□□□ -2.4
Hmgn3Q9DCB1 Gm24808-201ENSMUST00000157993 118 ntBASIC0.08□□□□□ -2.4
Hmgn3Q9DCB1 Gm22768-201ENSMUST00000158366 153 ntBASIC0.08□□□□□ -2.4
Hmgn3Q9DCB1 Gm23410-201ENSMUST00000179967 107 ntBASIC0.08□□□□□ -2.4
Hmgn3Q9DCB1 Gm22307-201ENSMUST00000180019 107 ntBASIC0.08□□□□□ -2.4
Hmgn3Q9DCB1 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC0.08□□□□□ -2.4
Hmgn3Q9DCB1 Mir6365-201ENSMUST00000183990 101 ntBASIC0.08□□□□□ -2.4
Hmgn3Q9DCB1 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
Hmgn3Q9DCB1 Gm42719-201ENSMUST00000197393 355 ntBASIC0.08□□□□□ -2.4
Hmgn3Q9DCB1 Gm44548-201ENSMUST00000208929 192 ntBASIC0.08□□□□□ -2.4
Hmgn3Q9DCB1 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC0.08□□□□□ -2.4
Hmgn3Q9DCB1 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC0.08□□□□□ -2.4
Hmgn3Q9DCB1 Gm22505-201ENSMUST00000082956 108 ntBASIC0.08□□□□□ -2.4
Hmgn3Q9DCB1 Gm22363-201ENSMUST00000083100 108 ntBASIC0.08□□□□□ -2.4
Hmgn3Q9DCB1 Gm23814-201ENSMUST00000083230 102 ntBASIC0.08□□□□□ -2.4
Hmgn3Q9DCB1 Mir221-201ENSMUST00000083488 95 ntBASIC0.08□□□□□ -2.4
Hmgn3Q9DCB1 Gm22444-201ENSMUST00000093693 108 ntBASIC0.08□□□□□ -2.4
Hmgn3Q9DCB1 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC0.07□□□□□ -2.4
Hmgn3Q9DCB1 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
Hmgn3Q9DCB1 Gm12825-201ENSMUST00000120249 563 ntBASIC0.07□□□□□ -2.4
Hmgn3Q9DCB1 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC0.07□□□□□ -2.4
Hmgn3Q9DCB1 Gm26968-201ENSMUST00000182894 481 ntBASIC0.07□□□□□ -2.4
Hmgn3Q9DCB1 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.07□□□□□ -2.4
Hmgn3Q9DCB1 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.07□□□□□ -2.4
Hmgn3Q9DCB1 Gm45387-201ENSMUST00000209792 632 ntBASIC0.07□□□□□ -2.4
Hmgn3Q9DCB1 Gm45689-201ENSMUST00000210522 133 ntBASIC0.07□□□□□ -2.4
Hmgn3Q9DCB1 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
Hmgn3Q9DCB1 AC154851.2-201ENSMUST00000222172 644 ntBASIC0.07□□□□□ -2.4
Hmgn3Q9DCB1 AC121960.3-201ENSMUST00000227077 623 ntBASIC0.07□□□□□ -2.4
Hmgn3Q9DCB1 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.07□□□□□ -2.4
Hmgn3Q9DCB1 AC112935.1-201ENSMUST00000227603 250 ntBASIC0.07□□□□□ -2.4
Hmgn3Q9DCB1 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC0.07□□□□□ -2.4
Hmgn3Q9DCB1 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
Hmgn3Q9DCB1 Gm25589-201ENSMUST00000082502 166 ntBASIC0.07□□□□□ -2.4
Hmgn3Q9DCB1 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC0.07□□□□□ -2.4
Hmgn3Q9DCB1 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
Hmgn3Q9DCB1 Gm23332-201ENSMUST00000157424 275 ntBASIC0.06□□□□□ -2.4
Hmgn3Q9DCB1 Gm24716-201ENSMUST00000157524 104 ntBASIC0.06□□□□□ -2.4
Hmgn3Q9DCB1 Gm25026-201ENSMUST00000175017 188 ntBASIC0.06□□□□□ -2.4
Hmgn3Q9DCB1 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC0.06□□□□□ -2.4
Hmgn3Q9DCB1 Gm7329-201ENSMUST00000185915 210 ntBASIC0.06□□□□□ -2.4
Hmgn3Q9DCB1 Gm43171-201ENSMUST00000199882 291 ntBASIC0.06□□□□□ -2.4
Hmgn3Q9DCB1 Gm26379-202ENSMUST00000200225 132 ntBASIC0.06□□□□□ -2.4
Hmgn3Q9DCB1 Gm18039-201ENSMUST00000217816 728 ntBASIC0.06□□□□□ -2.4
Hmgn3Q9DCB1 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC0.06□□□□□ -2.4
Hmgn3Q9DCB1 CT009764.1-201ENSMUST00000222260 483 ntBASIC0.06□□□□□ -2.4
Hmgn3Q9DCB1 Gm26206-201ENSMUST00000082908 110 ntBASIC0.06□□□□□ -2.4
Hmgn3Q9DCB1 n-R5s50-201ENSMUST00000083168 111 ntBASIC0.06□□□□□ -2.4
Hmgn3Q9DCB1 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.06□□□□□ -2.4
Hmgn3Q9DCB1 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
Hmgn3Q9DCB1 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC0.05□□□□□ -2.4
Hmgn3Q9DCB1 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC0.05□□□□□ -2.4
Hmgn3Q9DCB1 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.05□□□□□ -2.4
Hmgn3Q9DCB1 Gm26038-201ENSMUST00000158151 106 ntBASIC0.05□□□□□ -2.4
Hmgn3Q9DCB1 Gm20698-201ENSMUST00000175657 233 ntBASIC0.05□□□□□ -2.4
Hmgn3Q9DCB1 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC0.05□□□□□ -2.4
Hmgn3Q9DCB1 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
Hmgn3Q9DCB1 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
Hmgn3Q9DCB1 Gm28408-201ENSMUST00000191557 463 ntBASIC0.05□□□□□ -2.4
Hmgn3Q9DCB1 Mir219b-201ENSMUST00000198317 65 ntBASIC0.05□□□□□ -2.4
Hmgn3Q9DCB1 Gm43680-201ENSMUST00000199466 340 ntBASIC0.05□□□□□ -2.4
Hmgn3Q9DCB1 Gm45730-201ENSMUST00000212560 395 ntBASIC0.05□□□□□ -2.4
Hmgn3Q9DCB1 Gm2628-201ENSMUST00000218019 426 ntBASIC0.05□□□□□ -2.4
Hmgn3Q9DCB1 Gm13731-201ENSMUST00000117332 196 ntBASIC0.04□□□□□ -2.4
Hmgn3Q9DCB1 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC0.04□□□□□ -2.4
Hmgn3Q9DCB1 Gm22755-201ENSMUST00000157143 100 ntBASIC0.04□□□□□ -2.4
Hmgn3Q9DCB1 Gm24476-201ENSMUST00000157437 131 ntBASIC0.04□□□□□ -2.4
Hmgn3Q9DCB1 Gm22706-201ENSMUST00000157907 112 ntBASIC0.04□□□□□ -2.4
Hmgn3Q9DCB1 Gm24552-201ENSMUST00000158646 103 ntBASIC0.04□□□□□ -2.4
Hmgn3Q9DCB1 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC0.04□□□□□ -2.4
Hmgn3Q9DCB1 Mir6364-201ENSMUST00000183396 86 ntBASIC0.04□□□□□ -2.4
Hmgn3Q9DCB1 Mir7667-201ENSMUST00000183866 63 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms