Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm24412-201ENSMUST00000083426 109 ntBASIC1.5□□□□□ -2.17
Ccdc3Q9D6Y1 Gm23516-201ENSMUST00000093728 107 ntBASIC1.5□□□□□ -2.17
Ccdc3Q9D6Y1 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.5□□□□□ -2.17
Ccdc3Q9D6Y1 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.5□□□□□ -2.17
Ccdc3Q9D6Y1 Gm23744-201ENSMUST00000104231 149 ntBASIC1.49□□□□□ -2.17
Ccdc3Q9D6Y1 Gm23118-201ENSMUST00000122657 187 ntBASIC1.49□□□□□ -2.17
Ccdc3Q9D6Y1 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.49□□□□□ -2.17
Ccdc3Q9D6Y1 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Ccdc3Q9D6Y1 Gm23381-201ENSMUST00000157676 94 ntBASIC1.49□□□□□ -2.17
Ccdc3Q9D6Y1 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC1.49□□□□□ -2.17
Ccdc3Q9D6Y1 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.49□□□□□ -2.17
Ccdc3Q9D6Y1 Gm28283-201ENSMUST00000185509 178 ntBASIC1.49□□□□□ -2.17
Ccdc3Q9D6Y1 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Ccdc3Q9D6Y1 Gm38154-201ENSMUST00000195444 340 ntBASIC1.49□□□□□ -2.17
Ccdc3Q9D6Y1 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC1.49□□□□□ -2.17
Ccdc3Q9D6Y1 Gm42807-201ENSMUST00000200141 329 ntBASIC1.49□□□□□ -2.17
Ccdc3Q9D6Y1 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.49□□□□□ -2.17
Ccdc3Q9D6Y1 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC1.49□□□□□ -2.17
Ccdc3Q9D6Y1 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Ccdc3Q9D6Y1 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.49□□□□□ -2.17
Ccdc3Q9D6Y1 Gm11854-201ENSMUST00000117839 446 ntBASIC1.48□□□□□ -2.17
Ccdc3Q9D6Y1 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.48□□□□□ -2.17
Ccdc3Q9D6Y1 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC1.48□□□□□ -2.17
Ccdc3Q9D6Y1 Gm23713-201ENSMUST00000157353 70 ntBASIC1.48□□□□□ -2.17
Ccdc3Q9D6Y1 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.48□□□□□ -2.17
Ccdc3Q9D6Y1 Gm22615-201ENSMUST00000158102 70 ntBASIC1.48□□□□□ -2.17
Ccdc3Q9D6Y1 Gm26157-201ENSMUST00000158974 126 ntBASIC1.48□□□□□ -2.17
Ccdc3Q9D6Y1 Gm29231-201ENSMUST00000179850 319 ntBASIC1.48□□□□□ -2.17
Ccdc3Q9D6Y1 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.48□□□□□ -2.17
Ccdc3Q9D6Y1 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC1.48□□□□□ -2.17
Ccdc3Q9D6Y1 Gm18691-201ENSMUST00000203593 872 ntBASIC1.48□□□□□ -2.17
Ccdc3Q9D6Y1 Gm46103-201ENSMUST00000217614 341 ntBASIC1.48□□□□□ -2.17
Ccdc3Q9D6Y1 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.48□□□□□ -2.17
Ccdc3Q9D6Y1 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Ccdc3Q9D6Y1 Mir151-201ENSMUST00000083678 68 ntBASIC1.48□□□□□ -2.17
Ccdc3Q9D6Y1 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Ccdc3Q9D6Y1 Gm25088-201ENSMUST00000101803 79 ntBASIC1.47□□□□□ -2.17
Ccdc3Q9D6Y1 Gm26082-201ENSMUST00000104070 127 ntBASIC1.47□□□□□ -2.17
Ccdc3Q9D6Y1 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Ccdc3Q9D6Y1 Gm23558-201ENSMUST00000157823 80 ntBASIC1.47□□□□□ -2.17
Ccdc3Q9D6Y1 Gm24174-201ENSMUST00000158933 111 ntBASIC1.47□□□□□ -2.17
Ccdc3Q9D6Y1 Gm17054-201ENSMUST00000169811 259 ntBASIC1.47□□□□□ -2.17
Ccdc3Q9D6Y1 Gm25243-201ENSMUST00000174912 207 ntBASIC1.47□□□□□ -2.17
Ccdc3Q9D6Y1 Gm25994-201ENSMUST00000175392 101 ntBASIC1.47□□□□□ -2.17
Ccdc3Q9D6Y1 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
Ccdc3Q9D6Y1 Gm25361-201ENSMUST00000179358 76 ntBASIC1.47□□□□□ -2.17
Ccdc3Q9D6Y1 Gm29216-201ENSMUST00000187117 492 ntBASIC1.47□□□□□ -2.17
Ccdc3Q9D6Y1 Gm28438-201ENSMUST00000188299 345 ntBASIC1.47□□□□□ -2.17
Ccdc3Q9D6Y1 Trbv24-201ENSMUST00000194614 347 ntBASIC1.47□□□□□ -2.17
Ccdc3Q9D6Y1 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.47□□□□□ -2.17
Ccdc3Q9D6Y1 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Ccdc3Q9D6Y1 Olfr1285-201ENSMUST00000208523 903 ntBASIC1.47□□□□□ -2.17
Ccdc3Q9D6Y1 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.47□□□□□ -2.17
Ccdc3Q9D6Y1 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Ccdc3Q9D6Y1 Gm29809-201ENSMUST00000218423 493 ntBASIC1.47□□□□□ -2.17
Ccdc3Q9D6Y1 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.47□□□□□ -2.17
Ccdc3Q9D6Y1 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Ccdc3Q9D6Y1 Gm23517-201ENSMUST00000082830 192 ntBASIC1.47□□□□□ -2.17
Ccdc3Q9D6Y1 BC022960-201ENSMUST00000119987 1815 ntBASIC1.47□□□□□ -2.17
Ccdc3Q9D6Y1 AC162910.1-201ENSMUST00000221219 1723 ntBASIC1.46□□□□□ -2.18
Ccdc3Q9D6Y1 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC1.46□□□□□ -2.18
Ccdc3Q9D6Y1 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.46□□□□□ -2.18
Ccdc3Q9D6Y1 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
Ccdc3Q9D6Y1 Gm25563-201ENSMUST00000104603 74 ntBASIC1.46□□□□□ -2.18
Ccdc3Q9D6Y1 Gm14558-201ENSMUST00000117458 381 ntBASIC1.46□□□□□ -2.18
Ccdc3Q9D6Y1 Gm22228-201ENSMUST00000157364 101 ntBASIC1.46□□□□□ -2.18
Ccdc3Q9D6Y1 Gm27396-201ENSMUST00000157708 58 ntBASIC1.46□□□□□ -2.18
Ccdc3Q9D6Y1 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC1.46□□□□□ -2.18
Ccdc3Q9D6Y1 Gm2966-201ENSMUST00000166052 481 ntBASIC1.46□□□□□ -2.18
Ccdc3Q9D6Y1 Trbv22-201ENSMUST00000191697 291 ntBASIC1.46□□□□□ -2.18
Ccdc3Q9D6Y1 Mir6962-201ENSMUST00000199512 63 ntBASIC1.46□□□□□ -2.18
Ccdc3Q9D6Y1 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.46□□□□□ -2.18
Ccdc3Q9D6Y1 Gm43578-201ENSMUST00000201250 459 ntBASIC1.46□□□□□ -2.18
Ccdc3Q9D6Y1 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC1.46□□□□□ -2.18
Ccdc3Q9D6Y1 Gm22149-201ENSMUST00000104442 136 ntBASIC1.45□□□□□ -2.18
Ccdc3Q9D6Y1 Gm23336-201ENSMUST00000117023 123 ntBASIC1.45□□□□□ -2.18
Ccdc3Q9D6Y1 Gm13378-201ENSMUST00000117483 336 ntBASIC1.45□□□□□ -2.18
Ccdc3Q9D6Y1 Gm6587-201ENSMUST00000120219 613 ntBASIC1.45□□□□□ -2.18
Ccdc3Q9D6Y1 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Ccdc3Q9D6Y1 Mir1942-201ENSMUST00000157274 63 ntBASIC1.45□□□□□ -2.18
Ccdc3Q9D6Y1 Gm22038-201ENSMUST00000157277 242 ntBASIC1.45□□□□□ -2.18
Ccdc3Q9D6Y1 Mir1949-201ENSMUST00000157434 141 ntBASIC1.45□□□□□ -2.18
Ccdc3Q9D6Y1 Gm23122-201ENSMUST00000157645 103 ntBASIC1.45□□□□□ -2.18
Ccdc3Q9D6Y1 Gm22389-201ENSMUST00000158193 301 ntBASIC1.45□□□□□ -2.18
Ccdc3Q9D6Y1 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.45□□□□□ -2.18
Ccdc3Q9D6Y1 Gm16162-201ENSMUST00000162296 297 ntBASIC1.45□□□□□ -2.18
Ccdc3Q9D6Y1 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Ccdc3Q9D6Y1 Gm24897-201ENSMUST00000179033 107 ntBASIC1.45□□□□□ -2.18
Ccdc3Q9D6Y1 Gm27894-201ENSMUST00000184177 92 ntBASIC1.45□□□□□ -2.18
Ccdc3Q9D6Y1 Gm28688-201ENSMUST00000187301 268 ntBASIC1.45□□□□□ -2.18
Ccdc3Q9D6Y1 Gm5116-201ENSMUST00000187732 463 ntBASIC1.45□□□□□ -2.18
Ccdc3Q9D6Y1 Gm29627-201ENSMUST00000187984 463 ntBASIC1.45□□□□□ -2.18
Ccdc3Q9D6Y1 Mir3068-202ENSMUST00000197755 79 ntBASIC1.45□□□□□ -2.18
Ccdc3Q9D6Y1 Gm45071-201ENSMUST00000205353 571 ntBASIC1.45□□□□□ -2.18
Ccdc3Q9D6Y1 Gm44962-201ENSMUST00000206460 279 ntBASIC1.45□□□□□ -2.18
Ccdc3Q9D6Y1 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.45□□□□□ -2.18
Ccdc3Q9D6Y1 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.45□□□□□ -2.18
Ccdc3Q9D6Y1 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Ccdc3Q9D6Y1 Gm22810-201ENSMUST00000082741 158 ntBASIC1.45□□□□□ -2.18
Ccdc3Q9D6Y1 Gm23454-201ENSMUST00000083332 133 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 101.7 ms