Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm29553-201ENSMUST00000189692 279 ntBASIC3.34□□□□□ -1.87
Ddx56Q9D0R4 Gm6801-201ENSMUST00000190697 339 ntBASIC3.34□□□□□ -1.87
Ddx56Q9D0R4 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC3.34□□□□□ -1.87
Ddx56Q9D0R4 AC154271.1-201ENSMUST00000224780 383 ntBASIC3.34□□□□□ -1.87
Ddx56Q9D0R4 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.34□□□□□ -1.87
Ddx56Q9D0R4 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Ddx56Q9D0R4 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Ddx56Q9D0R4 Snord68-201ENSMUST00000082516 86 ntBASIC3.34□□□□□ -1.87
Ddx56Q9D0R4 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Ddx56Q9D0R4 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Ddx56Q9D0R4 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
Ddx56Q9D0R4 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
Ddx56Q9D0R4 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.34□□□□□ -1.88
Ddx56Q9D0R4 Gm37761-201ENSMUST00000194989 2098 ntBASIC3.33□□□□□ -1.88
Ddx56Q9D0R4 Gm23142-201ENSMUST00000101848 105 ntBASIC3.33□□□□□ -1.88
Ddx56Q9D0R4 Gm26240-201ENSMUST00000101893 105 ntBASIC3.33□□□□□ -1.88
Ddx56Q9D0R4 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Ddx56Q9D0R4 Gm25526-201ENSMUST00000104332 132 ntBASIC3.33□□□□□ -1.88
Ddx56Q9D0R4 Gm15010-201ENSMUST00000117153 407 ntBASIC3.33□□□□□ -1.88
Ddx56Q9D0R4 Gm6954-201ENSMUST00000117416 225 ntBASIC3.33□□□□□ -1.88
Ddx56Q9D0R4 Gm13729-201ENSMUST00000120328 406 ntBASIC3.33□□□□□ -1.88
Ddx56Q9D0R4 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC3.33□□□□□ -1.88
Ddx56Q9D0R4 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.33□□□□□ -1.88
Ddx56Q9D0R4 Gm14770-201ENSMUST00000122197 312 ntBASIC3.33□□□□□ -1.88
Ddx56Q9D0R4 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.33□□□□□ -1.88
Ddx56Q9D0R4 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC3.33□□□□□ -1.88
Ddx56Q9D0R4 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC3.33□□□□□ -1.88
Ddx56Q9D0R4 Gm28591-201ENSMUST00000185259 183 ntBASIC3.33□□□□□ -1.88
Ddx56Q9D0R4 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.33□□□□□ -1.88
Ddx56Q9D0R4 Gm43669-201ENSMUST00000198229 436 ntBASIC3.33□□□□□ -1.88
Ddx56Q9D0R4 Gm44468-201ENSMUST00000199516 105 ntBASIC3.33□□□□□ -1.88
Ddx56Q9D0R4 Gm32381-201ENSMUST00000203192 476 ntBASIC3.33□□□□□ -1.88
Ddx56Q9D0R4 Gm44824-201ENSMUST00000207021 229 ntBASIC3.33□□□□□ -1.88
Ddx56Q9D0R4 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.33□□□□□ -1.88
Ddx56Q9D0R4 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.33□□□□□ -1.88
Ddx56Q9D0R4 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Ddx56Q9D0R4 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.33□□□□□ -1.88
Ddx56Q9D0R4 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Ddx56Q9D0R4 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Gm23609-201ENSMUST00000104542 127 ntBASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 n-R5s26-201ENSMUST00000104601 122 ntBASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Gm13518-201ENSMUST00000120018 233 ntBASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Defa-ps8-201ENSMUST00000120972 279 ntBASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Gm14678-201ENSMUST00000121396 482 ntBASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Gm25269-201ENSMUST00000122601 104 ntBASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Gm26477-201ENSMUST00000122617 323 ntBASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Gm23589-201ENSMUST00000157660 105 ntBASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Ear-ps8-201ENSMUST00000161935 354 ntBASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Gm28008-201ENSMUST00000184021 186 ntBASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Gm27761-201ENSMUST00000184091 131 ntBASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Igkv15-97-201ENSMUST00000197637 339 ntBASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Gm44024-201ENSMUST00000203008 476 ntBASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Gm44425-201ENSMUST00000203739 429 ntBASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 AC158597.1-201ENSMUST00000216234 150 ntBASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Gm23345-201ENSMUST00000083817 150 ntBASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Gm23040-201ENSMUST00000083869 163 ntBASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Mir496a-201ENSMUST00000093627 79 ntBASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ddx56Q9D0R4 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ddx56Q9D0R4 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC3.31□□□□□ -1.88
Ddx56Q9D0R4 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Ddx56Q9D0R4 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Ddx56Q9D0R4 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Ddx56Q9D0R4 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC3.31□□□□□ -1.88
Ddx56Q9D0R4 Mir3106-201ENSMUST00000175401 82 ntBASIC3.31□□□□□ -1.88
Ddx56Q9D0R4 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Ddx56Q9D0R4 Gm44010-201ENSMUST00000204432 331 ntBASIC3.31□□□□□ -1.88
Ddx56Q9D0R4 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC3.31□□□□□ -1.88
Ddx56Q9D0R4 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC3.31□□□□□ -1.88
Ddx56Q9D0R4 AC160962.2-201ENSMUST00000224761 632 ntBASIC3.31□□□□□ -1.88
Ddx56Q9D0R4 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.31□□□□□ -1.88
Ddx56Q9D0R4 Gm22979-201ENSMUST00000082609 159 ntBASIC3.31□□□□□ -1.88
Ddx56Q9D0R4 Gm23462-201ENSMUST00000083264 104 ntBASIC3.31□□□□□ -1.88
Ddx56Q9D0R4 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
Ddx56Q9D0R4 Gm42755-201ENSMUST00000198533 1493 ntBASIC3.3□□□□□ -1.88
Ddx56Q9D0R4 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Ddx56Q9D0R4 Gm22590-201ENSMUST00000104247 128 ntBASIC3.3□□□□□ -1.88
Ddx56Q9D0R4 Gm12617-201ENSMUST00000121268 381 ntBASIC3.3□□□□□ -1.88
Ddx56Q9D0R4 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC3.3□□□□□ -1.88
Ddx56Q9D0R4 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.3□□□□□ -1.88
Ddx56Q9D0R4 Gm22598-201ENSMUST00000157600 127 ntBASIC3.3□□□□□ -1.88
Ddx56Q9D0R4 Gm26061-201ENSMUST00000175584 108 ntBASIC3.3□□□□□ -1.88
Ddx56Q9D0R4 Gm27893-201ENSMUST00000184408 194 ntBASIC3.3□□□□□ -1.88
Ddx56Q9D0R4 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC3.3□□□□□ -1.88
Ddx56Q9D0R4 Gm28995-201ENSMUST00000186625 261 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms