Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ssu72Q9CY97 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.6□□□□□ -1.83
Ssu72Q9CY97 Gm14073-201ENSMUST00000117344 381 ntBASIC3.6□□□□□ -1.83
Ssu72Q9CY97 Gm15936-201ENSMUST00000118706 460 ntBASIC3.6□□□□□ -1.83
Ssu72Q9CY97 Gm22883-201ENSMUST00000157376 106 ntBASIC3.6□□□□□ -1.83
Ssu72Q9CY97 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Ssu72Q9CY97 Gm10067-201ENSMUST00000179462 348 ntBASIC3.6□□□□□ -1.83
Ssu72Q9CY97 Gm37001-201ENSMUST00000193377 190 ntBASIC3.6□□□□□ -1.83
Ssu72Q9CY97 Gm8790-201ENSMUST00000194108 322 ntBASIC3.6□□□□□ -1.83
Ssu72Q9CY97 Gm42526-201ENSMUST00000198956 393 ntBASIC3.6□□□□□ -1.83
Ssu72Q9CY97 Gm43746-201ENSMUST00000200028 317 ntBASIC3.6□□□□□ -1.83
Ssu72Q9CY97 Gm44294-201ENSMUST00000205090 728 ntBASIC3.6□□□□□ -1.83
Ssu72Q9CY97 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.6□□□□□ -1.83
Ssu72Q9CY97 AC154213.2-201ENSMUST00000227138 187 ntBASIC3.6□□□□□ -1.83
Ssu72Q9CY97 Gm10242-201ENSMUST00000090064 330 ntBASIC3.6□□□□□ -1.83
Ssu72Q9CY97 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ssu72Q9CY97 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.6□□□□□ -1.83
Ssu72Q9CY97 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.6□□□□□ -1.83
Ssu72Q9CY97 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.59□□□□□ -1.83
Ssu72Q9CY97 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.59□□□□□ -1.83
Ssu72Q9CY97 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ssu72Q9CY97 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ssu72Q9CY97 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.59□□□□□ -1.83
Ssu72Q9CY97 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Ssu72Q9CY97 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ssu72Q9CY97 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC3.59□□□□□ -1.83
Ssu72Q9CY97 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Ssu72Q9CY97 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.59□□□□□ -1.83
Ssu72Q9CY97 Gm12443-201ENSMUST00000122308 323 ntBASIC3.59□□□□□ -1.83
Ssu72Q9CY97 Gm25321-201ENSMUST00000122558 102 ntBASIC3.59□□□□□ -1.83
Ssu72Q9CY97 Gm26148-201ENSMUST00000157430 68 ntBASIC3.59□□□□□ -1.83
Ssu72Q9CY97 Gm24716-201ENSMUST00000157524 104 ntBASIC3.59□□□□□ -1.83
Ssu72Q9CY97 Gm22217-201ENSMUST00000157556 313 ntBASIC3.59□□□□□ -1.83
Ssu72Q9CY97 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ssu72Q9CY97 Mir6914-201ENSMUST00000184999 69 ntBASIC3.59□□□□□ -1.83
Ssu72Q9CY97 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC3.59□□□□□ -1.83
Ssu72Q9CY97 Gm28650-201ENSMUST00000188413 411 ntBASIC3.59□□□□□ -1.83
Ssu72Q9CY97 Gm29479-201ENSMUST00000190352 455 ntBASIC3.59□□□□□ -1.83
Ssu72Q9CY97 Gm42814-201ENSMUST00000199370 460 ntBASIC3.59□□□□□ -1.83
Ssu72Q9CY97 Gm45553-201ENSMUST00000209929 507 ntBASIC3.59□□□□□ -1.83
Ssu72Q9CY97 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC3.59□□□□□ -1.83
Ssu72Q9CY97 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.59□□□□□ -1.83
Ssu72Q9CY97 Gm24966-201ENSMUST00000082443 79 ntBASIC3.59□□□□□ -1.83
Ssu72Q9CY97 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
Ssu72Q9CY97 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.59□□□□□ -1.83
Ssu72Q9CY97 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.59□□□□□ -1.84
Ssu72Q9CY97 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Ssu72Q9CY97 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ssu72Q9CY97 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Ssu72Q9CY97 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ssu72Q9CY97 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Ssu72Q9CY97 Gm24281-201ENSMUST00000104234 136 ntBASIC3.58□□□□□ -1.84
Ssu72Q9CY97 Gm24605-201ENSMUST00000104772 96 ntBASIC3.58□□□□□ -1.84
Ssu72Q9CY97 Gm26187-201ENSMUST00000157693 101 ntBASIC3.58□□□□□ -1.84
Ssu72Q9CY97 Gm23554-201ENSMUST00000157818 110 ntBASIC3.58□□□□□ -1.84
Ssu72Q9CY97 Gm17166-201ENSMUST00000172006 431 ntBASIC3.58□□□□□ -1.84
Ssu72Q9CY97 Mir5127-201ENSMUST00000175295 71 ntBASIC3.58□□□□□ -1.84
Ssu72Q9CY97 Mir5134-201ENSMUST00000175529 78 ntBASIC3.58□□□□□ -1.84
Ssu72Q9CY97 Gm19901-201ENSMUST00000192191 495 ntBASIC3.58□□□□□ -1.84
Ssu72Q9CY97 Gm43680-201ENSMUST00000199466 340 ntBASIC3.58□□□□□ -1.84
Ssu72Q9CY97 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Ssu72Q9CY97 Gm43604-201ENSMUST00000199799 705 ntBASIC3.58□□□□□ -1.84
Ssu72Q9CY97 Gm19244-201ENSMUST00000204340 253 ntBASIC3.58□□□□□ -1.84
Ssu72Q9CY97 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC3.58□□□□□ -1.84
Ssu72Q9CY97 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.58□□□□□ -1.84
Ssu72Q9CY97 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.58□□□□□ -1.84
Ssu72Q9CY97 AC098718.2-201ENSMUST00000226822 285 ntBASIC3.58□□□□□ -1.84
Ssu72Q9CY97 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.58□□□□□ -1.84
Ssu72Q9CY97 Snord21-201ENSMUST00000082519 94 ntBASIC3.58□□□□□ -1.84
Ssu72Q9CY97 Gm23875-201ENSMUST00000083711 318 ntBASIC3.58□□□□□ -1.84
Ssu72Q9CY97 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.57□□□□□ -1.84
Ssu72Q9CY97 Gm16289-201ENSMUST00000162079 183 ntBASIC3.57□□□□□ -1.84
Ssu72Q9CY97 Mir5112-201ENSMUST00000174897 60 ntBASIC3.57□□□□□ -1.84
Ssu72Q9CY97 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ssu72Q9CY97 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC3.57□□□□□ -1.84
Ssu72Q9CY97 Gm27851-201ENSMUST00000183529 63 ntBASIC3.57□□□□□ -1.84
Ssu72Q9CY97 Mir7056-201ENSMUST00000183776 59 ntBASIC3.57□□□□□ -1.84
Ssu72Q9CY97 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.57□□□□□ -1.84
Ssu72Q9CY97 Gm37698-201ENSMUST00000192605 463 ntBASIC3.57□□□□□ -1.84
Ssu72Q9CY97 AC150901.1-201ENSMUST00000208407 145 ntBASIC3.57□□□□□ -1.84
Ssu72Q9CY97 AC154241.1-201ENSMUST00000223952 356 ntBASIC3.57□□□□□ -1.84
Ssu72Q9CY97 Mir302d-201ENSMUST00000083513 66 ntBASIC3.57□□□□□ -1.84
Ssu72Q9CY97 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.57□□□□□ -1.84
Ssu72Q9CY97 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ssu72Q9CY97 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ssu72Q9CY97 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.57□□□□□ -1.84
Ssu72Q9CY97 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ssu72Q9CY97 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Ssu72Q9CY97 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Ssu72Q9CY97 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.56□□□□□ -1.84
Ssu72Q9CY97 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
Ssu72Q9CY97 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Ssu72Q9CY97 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Ssu72Q9CY97 Gm14299-201ENSMUST00000117586 397 ntBASIC3.56□□□□□ -1.84
Ssu72Q9CY97 Gm14020-201ENSMUST00000118165 662 ntBASIC3.56□□□□□ -1.84
Ssu72Q9CY97 Gm11982-201ENSMUST00000121480 314 ntBASIC3.56□□□□□ -1.84
Ssu72Q9CY97 Gm22767-201ENSMUST00000158365 165 ntBASIC3.56□□□□□ -1.84
Ssu72Q9CY97 Gm27271-201ENSMUST00000183509 170 ntBASIC3.56□□□□□ -1.84
Ssu72Q9CY97 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Ssu72Q9CY97 Gm43563-201ENSMUST00000196761 198 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms