Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm23268-201ENSMUST00000175494 78 ntBASIC2.52□□□□□ -2.01
Ddx28Q9CWT6 Gm20656-201ENSMUST00000176925 518 ntBASIC2.52□□□□□ -2.01
Ddx28Q9CWT6 Gm7837-201ENSMUST00000190873 412 ntBASIC2.52□□□□□ -2.01
Ddx28Q9CWT6 Gm37361-201ENSMUST00000194345 132 ntBASIC2.52□□□□□ -2.01
Ddx28Q9CWT6 Gm38041-201ENSMUST00000194445 661 ntBASIC2.52□□□□□ -2.01
Ddx28Q9CWT6 Gm24350-202ENSMUST00000198309 132 ntBASIC2.52□□□□□ -2.01
Ddx28Q9CWT6 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Ddx28Q9CWT6 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.52□□□□□ -2.01
Ddx28Q9CWT6 Gm10298-201ENSMUST00000074801 265 ntBASIC2.52□□□□□ -2.01
Ddx28Q9CWT6 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ddx28Q9CWT6 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ddx28Q9CWT6 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ddx28Q9CWT6 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ddx28Q9CWT6 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Gm22270-201ENSMUST00000104034 132 ntBASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Gm42606-201ENSMUST00000114209 239 ntBASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Gm15714-201ENSMUST00000117168 250 ntBASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Gm22791-201ENSMUST00000157232 145 ntBASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Gm22836-201ENSMUST00000158441 61 ntBASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Mir5099-201ENSMUST00000175257 74 ntBASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Gm23933-201ENSMUST00000178405 79 ntBASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Mir6993-201ENSMUST00000184912 65 ntBASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Gm28282-201ENSMUST00000186072 186 ntBASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Gm5329-201ENSMUST00000186898 463 ntBASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Gm43669-201ENSMUST00000198229 436 ntBASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Gm43976-201ENSMUST00000203637 235 ntBASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Gm44687-201ENSMUST00000204975 235 ntBASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Gm18453-201ENSMUST00000208000 626 ntBASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Gm45288-201ENSMUST00000210236 151 ntBASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 AC164297.3-201ENSMUST00000224238 94 ntBASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Gm22620-201ENSMUST00000082700 133 ntBASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Gm23096-201ENSMUST00000083447 107 ntBASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Gm26327-201ENSMUST00000093724 111 ntBASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Gm37661-201ENSMUST00000191863 1550 ntBASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.51□□□□□ -2.01
Ddx28Q9CWT6 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Mir701-201ENSMUST00000102208 109 ntBASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Gm25848-201ENSMUST00000116790 144 ntBASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Gm13339-201ENSMUST00000120651 510 ntBASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Gm24436-201ENSMUST00000157889 302 ntBASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Gm24857-201ENSMUST00000158061 310 ntBASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Gm7925-201ENSMUST00000166690 401 ntBASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Gm26914-201ENSMUST00000182262 223 ntBASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Mir6370-201ENSMUST00000183510 120 ntBASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Mir7667-201ENSMUST00000183866 63 ntBASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Gm28825-201ENSMUST00000186233 238 ntBASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Gm29335-201ENSMUST00000188361 459 ntBASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Gm34073-201ENSMUST00000195736 212 ntBASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Gm44393-201ENSMUST00000197418 138 ntBASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Gm5023-201ENSMUST00000217442 587 ntBASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Gm2436-201ENSMUST00000219562 774 ntBASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Gm9174-201ENSMUST00000078149 255 ntBASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Olfr197-201ENSMUST00000080031 926 ntBASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Gm26458-201ENSMUST00000082832 128 ntBASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Gm22443-201ENSMUST00000082890 107 ntBASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Gm23247-201ENSMUST00000083373 107 ntBASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Mir423-201ENSMUST00000083584 109 ntBASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
Ddx28Q9CWT6 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Ddx28Q9CWT6 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.49□□□□□ -2.01
Ddx28Q9CWT6 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Ddx28Q9CWT6 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.49□□□□□ -2.01
Ddx28Q9CWT6 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Ddx28Q9CWT6 Gm25539-201ENSMUST00000116886 122 ntBASIC2.49□□□□□ -2.01
Ddx28Q9CWT6 Gm13457-201ENSMUST00000117885 267 ntBASIC2.49□□□□□ -2.01
Ddx28Q9CWT6 Gm7327-201ENSMUST00000120925 652 ntBASIC2.49□□□□□ -2.01
Ddx28Q9CWT6 Gm13913-201ENSMUST00000121126 260 ntBASIC2.49□□□□□ -2.01
Ddx28Q9CWT6 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms