Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Ccdc43Q9CR29 Gm25788-201ENSMUST00000082721 131 ntBASIC2.36□□□□□ -2.03
Ccdc43Q9CR29 Snora69-201ENSMUST00000083708 131 ntBASIC2.36□□□□□ -2.03
Ccdc43Q9CR29 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Ccdc43Q9CR29 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.36□□□□□ -2.03
Ccdc43Q9CR29 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Ccdc43Q9CR29 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Ccdc43Q9CR29 Gm23641-201ENSMUST00000157857 101 ntBASIC2.35□□□□□ -2.03
Ccdc43Q9CR29 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC2.35□□□□□ -2.03
Ccdc43Q9CR29 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC2.35□□□□□ -2.03
Ccdc43Q9CR29 Gm2719-201ENSMUST00000191929 444 ntBASIC2.35□□□□□ -2.03
Ccdc43Q9CR29 Gm18296-201ENSMUST00000192475 783 ntBASIC2.35□□□□□ -2.03
Ccdc43Q9CR29 Gm42807-201ENSMUST00000200141 329 ntBASIC2.35□□□□□ -2.03
Ccdc43Q9CR29 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.35□□□□□ -2.03
Ccdc43Q9CR29 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.35□□□□□ -2.03
Ccdc43Q9CR29 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.35□□□□□ -2.03
Ccdc43Q9CR29 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC2.35□□□□□ -2.03
Ccdc43Q9CR29 Gm22353-201ENSMUST00000083918 136 ntBASIC2.35□□□□□ -2.03
Ccdc43Q9CR29 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.35□□□□□ -2.03
Ccdc43Q9CR29 AC124426.1-203ENSMUST00000221814 1362 ntBASIC2.35□□□□□ -2.03
Ccdc43Q9CR29 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.34□□□□□ -2.03
Ccdc43Q9CR29 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Ccdc43Q9CR29 Gm14833-201ENSMUST00000118345 1027 ntBASIC2.34□□□□□ -2.03
Ccdc43Q9CR29 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.34□□□□□ -2.03
Ccdc43Q9CR29 Gm16218-201ENSMUST00000155424 388 ntBASIC2.34□□□□□ -2.03
Ccdc43Q9CR29 Gm24837-201ENSMUST00000158683 81 ntBASIC2.34□□□□□ -2.03
Ccdc43Q9CR29 Gm23725-201ENSMUST00000177876 107 ntBASIC2.34□□□□□ -2.03
Ccdc43Q9CR29 Gm22166-201ENSMUST00000178419 121 ntBASIC2.34□□□□□ -2.03
Ccdc43Q9CR29 Gm23288-201ENSMUST00000179213 121 ntBASIC2.34□□□□□ -2.03
Ccdc43Q9CR29 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
Ccdc43Q9CR29 Gm25457-201ENSMUST00000179509 107 ntBASIC2.34□□□□□ -2.03
Ccdc43Q9CR29 Gm26622-201ENSMUST00000180520 298 ntBASIC2.34□□□□□ -2.03
Ccdc43Q9CR29 Gm27588-201ENSMUST00000185096 263 ntBASIC2.34□□□□□ -2.03
Ccdc43Q9CR29 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Ccdc43Q9CR29 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.34□□□□□ -2.03
Ccdc43Q9CR29 Gm38261-201ENSMUST00000192608 316 ntBASIC2.34□□□□□ -2.03
Ccdc43Q9CR29 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.34□□□□□ -2.03
Ccdc43Q9CR29 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.34□□□□□ -2.03
Ccdc43Q9CR29 AC124346.1-201ENSMUST00000218539 364 ntBASIC2.34□□□□□ -2.03
Ccdc43Q9CR29 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.34□□□□□ -2.03
Ccdc43Q9CR29 Gm22678-201ENSMUST00000116974 101 ntBASIC2.33□□□□□ -2.04
Ccdc43Q9CR29 Gm9225-201ENSMUST00000121921 836 ntBASIC2.33□□□□□ -2.04
Ccdc43Q9CR29 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC2.33□□□□□ -2.04
Ccdc43Q9CR29 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.33□□□□□ -2.04
Ccdc43Q9CR29 Gm25625-201ENSMUST00000157221 96 ntBASIC2.33□□□□□ -2.04
Ccdc43Q9CR29 Gm22159-201ENSMUST00000158412 130 ntBASIC2.33□□□□□ -2.04
Ccdc43Q9CR29 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Ccdc43Q9CR29 Gm8747-201ENSMUST00000195392 751 ntBASIC2.33□□□□□ -2.04
Ccdc43Q9CR29 Mir7217-201ENSMUST00000200304 62 ntBASIC2.33□□□□□ -2.04
Ccdc43Q9CR29 Gm44142-201ENSMUST00000203358 311 ntBASIC2.33□□□□□ -2.04
Ccdc43Q9CR29 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.33□□□□□ -2.04
Ccdc43Q9CR29 AC124542.1-201ENSMUST00000205588 908 ntBASIC2.33□□□□□ -2.04
Ccdc43Q9CR29 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC2.33□□□□□ -2.04
Ccdc43Q9CR29 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.33□□□□□ -2.04
Ccdc43Q9CR29 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Ccdc43Q9CR29 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Ccdc43Q9CR29 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Ccdc43Q9CR29 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Ccdc43Q9CR29 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Ccdc43Q9CR29 Gm25529-201ENSMUST00000104850 92 ntBASIC2.32□□□□□ -2.04
Ccdc43Q9CR29 Mir1192-201ENSMUST00000116976 121 ntBASIC2.32□□□□□ -2.04
Ccdc43Q9CR29 Gm12956-201ENSMUST00000122184 414 ntBASIC2.32□□□□□ -2.04
Ccdc43Q9CR29 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Ccdc43Q9CR29 Gm23000-201ENSMUST00000157083 139 ntBASIC2.32□□□□□ -2.04
Ccdc43Q9CR29 Gm25888-201ENSMUST00000157778 302 ntBASIC2.32□□□□□ -2.04
Ccdc43Q9CR29 Gm26157-201ENSMUST00000158974 126 ntBASIC2.32□□□□□ -2.04
Ccdc43Q9CR29 Gm7925-201ENSMUST00000166690 401 ntBASIC2.32□□□□□ -2.04
Ccdc43Q9CR29 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC2.32□□□□□ -2.04
Ccdc43Q9CR29 Gm37081-201ENSMUST00000192034 196 ntBASIC2.32□□□□□ -2.04
Ccdc43Q9CR29 Gm9402-201ENSMUST00000196849 388 ntBASIC2.32□□□□□ -2.04
Ccdc43Q9CR29 Gm18971-201ENSMUST00000197240 374 ntBASIC2.32□□□□□ -2.04
Ccdc43Q9CR29 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.32□□□□□ -2.04
Ccdc43Q9CR29 Gm18854-201ENSMUST00000211196 329 ntBASIC2.32□□□□□ -2.04
Ccdc43Q9CR29 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.32□□□□□ -2.04
Ccdc43Q9CR29 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.32□□□□□ -2.04
Ccdc43Q9CR29 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Ccdc43Q9CR29 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.32□□□□□ -2.04
Ccdc43Q9CR29 Gm15844-201ENSMUST00000118016 576 ntBASIC2.31□□□□□ -2.04
Ccdc43Q9CR29 Gm14402-201ENSMUST00000122217 508 ntBASIC2.31□□□□□ -2.04
Ccdc43Q9CR29 Gm25012-201ENSMUST00000158396 164 ntBASIC2.31□□□□□ -2.04
Ccdc43Q9CR29 Gm24388-201ENSMUST00000177872 107 ntBASIC2.31□□□□□ -2.04
Ccdc43Q9CR29 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC2.31□□□□□ -2.04
Ccdc43Q9CR29 Gm28058-201ENSMUST00000186421 264 ntBASIC2.31□□□□□ -2.04
Ccdc43Q9CR29 Trbv22-201ENSMUST00000191697 291 ntBASIC2.31□□□□□ -2.04
Ccdc43Q9CR29 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.31□□□□□ -2.04
Ccdc43Q9CR29 Gm44477-201ENSMUST00000199661 110 ntBASIC2.31□□□□□ -2.04
Ccdc43Q9CR29 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC2.31□□□□□ -2.04
Ccdc43Q9CR29 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC2.31□□□□□ -2.04
Ccdc43Q9CR29 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.31□□□□□ -2.04
Ccdc43Q9CR29 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.31□□□□□ -2.04
Ccdc43Q9CR29 AC164304.1-201ENSMUST00000226920 272 ntBASIC2.31□□□□□ -2.04
Ccdc43Q9CR29 AC154484.1-201ENSMUST00000227311 771 ntBASIC2.31□□□□□ -2.04
Ccdc43Q9CR29 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.31□□□□□ -2.04
Ccdc43Q9CR29 Mir29c-201ENSMUST00000083614 88 ntBASIC2.31□□□□□ -2.04
Ccdc43Q9CR29 Gm37903-201ENSMUST00000192122 2381 ntBASIC2.31□□□□□ -2.04
Ccdc43Q9CR29 Gm22674-201ENSMUST00000104413 131 ntBASIC2.3□□□□□ -2.04
Ccdc43Q9CR29 Gm12235-201ENSMUST00000118596 170 ntBASIC2.3□□□□□ -2.04
Ccdc43Q9CR29 Gm11471-201ENSMUST00000121824 198 ntBASIC2.3□□□□□ -2.04
Ccdc43Q9CR29 Gm15281-201ENSMUST00000125181 351 ntBASIC2.3□□□□□ -2.04
Ccdc43Q9CR29 Gm15692-201ENSMUST00000152173 352 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms