Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm37709-201ENSMUST00000195074 600 ntBASIC1.44□□□□□ -2.18
RTRAFQ9CQE8 Mir7021-201ENSMUST00000197026 63 ntBASIC1.44□□□□□ -2.18
RTRAFQ9CQE8 Gm44910-201ENSMUST00000208451 396 ntBASIC1.44□□□□□ -2.18
RTRAFQ9CQE8 Gm24406-201ENSMUST00000083026 128 ntBASIC1.44□□□□□ -2.18
RTRAFQ9CQE8 Gm24412-201ENSMUST00000083426 109 ntBASIC1.44□□□□□ -2.18
RTRAFQ9CQE8 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
RTRAFQ9CQE8 AC154386.1-201ENSMUST00000222753 2871 ntBASIC1.44□□□□□ -2.18
RTRAFQ9CQE8 Gm24122-201ENSMUST00000104107 132 ntBASIC1.43□□□□□ -2.18
RTRAFQ9CQE8 Gm12806-201ENSMUST00000119384 268 ntBASIC1.43□□□□□ -2.18
RTRAFQ9CQE8 Gm12304-201ENSMUST00000120312 385 ntBASIC1.43□□□□□ -2.18
RTRAFQ9CQE8 Gm13409-201ENSMUST00000122072 546 ntBASIC1.43□□□□□ -2.18
RTRAFQ9CQE8 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC1.43□□□□□ -2.18
RTRAFQ9CQE8 Gm24905-201ENSMUST00000158129 104 ntBASIC1.43□□□□□ -2.18
RTRAFQ9CQE8 Gm25711-201ENSMUST00000158633 128 ntBASIC1.43□□□□□ -2.18
RTRAFQ9CQE8 Gm23181-201ENSMUST00000158685 110 ntBASIC1.43□□□□□ -2.18
RTRAFQ9CQE8 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
RTRAFQ9CQE8 Gm24315-201ENSMUST00000177835 127 ntBASIC1.43□□□□□ -2.18
RTRAFQ9CQE8 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
RTRAFQ9CQE8 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
RTRAFQ9CQE8 Gm27532-201ENSMUST00000183726 113 ntBASIC1.43□□□□□ -2.18
RTRAFQ9CQE8 Mir496b-201ENSMUST00000184935 113 ntBASIC1.43□□□□□ -2.18
RTRAFQ9CQE8 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
RTRAFQ9CQE8 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC1.43□□□□□ -2.18
RTRAFQ9CQE8 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC1.43□□□□□ -2.18
RTRAFQ9CQE8 Gm2676-201ENSMUST00000207279 606 ntBASIC1.43□□□□□ -2.18
RTRAFQ9CQE8 Gm44870-201ENSMUST00000207291 357 ntBASIC1.43□□□□□ -2.18
RTRAFQ9CQE8 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.43□□□□□ -2.18
RTRAFQ9CQE8 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.43□□□□□ -2.18
RTRAFQ9CQE8 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
RTRAFQ9CQE8 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Gm25876-201ENSMUST00000104329 119 ntBASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Gm11854-201ENSMUST00000117839 446 ntBASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Gm7916-201ENSMUST00000120325 456 ntBASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Gm12956-201ENSMUST00000122184 414 ntBASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Gm23586-201ENSMUST00000157657 123 ntBASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Gm25012-201ENSMUST00000158396 164 ntBASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Gm24816-201ENSMUST00000175311 151 ntBASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Gm25457-201ENSMUST00000179509 107 ntBASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Gm27490-201ENSMUST00000184754 128 ntBASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Gm29013-201ENSMUST00000187431 237 ntBASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Gm37361-201ENSMUST00000194345 132 ntBASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Gm18971-201ENSMUST00000197240 374 ntBASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Gm44393-201ENSMUST00000197418 138 ntBASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Snord43-201ENSMUST00000199549 108 ntBASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Gm42857-201ENSMUST00000200823 339 ntBASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Gm44830-201ENSMUST00000207667 584 ntBASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Gm23448-201ENSMUST00000083151 104 ntBASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Gm23246-201ENSMUST00000083371 67 ntBASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC1.42□□□□□ -2.18
RTRAFQ9CQE8 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
RTRAFQ9CQE8 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
RTRAFQ9CQE8 Gm8858-201ENSMUST00000118259 342 ntBASIC1.41□□□□□ -2.18
RTRAFQ9CQE8 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC1.41□□□□□ -2.18
RTRAFQ9CQE8 Gm16328-201ENSMUST00000126985 196 ntBASIC1.41□□□□□ -2.18
RTRAFQ9CQE8 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC1.41□□□□□ -2.18
RTRAFQ9CQE8 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC1.41□□□□□ -2.18
RTRAFQ9CQE8 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC1.41□□□□□ -2.18
RTRAFQ9CQE8 Gm23829-201ENSMUST00000157392 270 ntBASIC1.41□□□□□ -2.18
RTRAFQ9CQE8 Gm24885-201ENSMUST00000158783 270 ntBASIC1.41□□□□□ -2.18
RTRAFQ9CQE8 Mir7k-201ENSMUST00000184115 110 ntBASIC1.41□□□□□ -2.18
RTRAFQ9CQE8 Mir6926-201ENSMUST00000184562 68 ntBASIC1.41□□□□□ -2.18
RTRAFQ9CQE8 Gm28058-201ENSMUST00000186421 264 ntBASIC1.41□□□□□ -2.18
RTRAFQ9CQE8 Gm29640-201ENSMUST00000187972 278 ntBASIC1.41□□□□□ -2.18
RTRAFQ9CQE8 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC1.41□□□□□ -2.18
RTRAFQ9CQE8 Gm37869-201ENSMUST00000193385 595 ntBASIC1.41□□□□□ -2.18
RTRAFQ9CQE8 Gm29950-201ENSMUST00000195273 237 ntBASIC1.41□□□□□ -2.18
RTRAFQ9CQE8 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.41□□□□□ -2.18
RTRAFQ9CQE8 Gm45730-201ENSMUST00000212560 395 ntBASIC1.41□□□□□ -2.18
RTRAFQ9CQE8 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC1.41□□□□□ -2.18
RTRAFQ9CQE8 AC124569.4-201ENSMUST00000223830 1220 ntBASIC1.41□□□□□ -2.18
RTRAFQ9CQE8 AC156790.3-201ENSMUST00000226200 254 ntBASIC1.41□□□□□ -2.18
RTRAFQ9CQE8 Mir452-201ENSMUST00000093629 85 ntBASIC1.41□□□□□ -2.18
RTRAFQ9CQE8 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
RTRAFQ9CQE8 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
RTRAFQ9CQE8 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.4□□□□□ -2.18
RTRAFQ9CQE8 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.4□□□□□ -2.18
RTRAFQ9CQE8 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
RTRAFQ9CQE8 Gm45461-201ENSMUST00000211726 4535 ntBASIC1.4□□□□□ -2.19
RTRAFQ9CQE8 Gm26384-201ENSMUST00000102183 110 ntBASIC1.4□□□□□ -2.19
RTRAFQ9CQE8 Gm13728-201ENSMUST00000117471 400 ntBASIC1.4□□□□□ -2.19
RTRAFQ9CQE8 Gm12053-201ENSMUST00000119022 252 ntBASIC1.4□□□□□ -2.19
RTRAFQ9CQE8 Gm14215-201ENSMUST00000120578 221 ntBASIC1.4□□□□□ -2.19
RTRAFQ9CQE8 Gm12926-201ENSMUST00000121158 409 ntBASIC1.4□□□□□ -2.19
RTRAFQ9CQE8 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.4□□□□□ -2.19
RTRAFQ9CQE8 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC1.4□□□□□ -2.19
RTRAFQ9CQE8 Gm23000-201ENSMUST00000157083 139 ntBASIC1.4□□□□□ -2.19
RTRAFQ9CQE8 Gm22257-201ENSMUST00000158687 301 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms