Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Gm26154-201ENSMUST00000102339 96 ntBASIC2.11□□□□□ -2.07
Sf3b1Q99NB9 Gm23109-201ENSMUST00000116867 126 ntBASIC2.11□□□□□ -2.07
Sf3b1Q99NB9 Gm12393-201ENSMUST00000117084 848 ntBASIC2.11□□□□□ -2.07
Sf3b1Q99NB9 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.11□□□□□ -2.07
Sf3b1Q99NB9 Gm25961-201ENSMUST00000157174 135 ntBASIC2.11□□□□□ -2.07
Sf3b1Q99NB9 Gm23043-201ENSMUST00000157890 109 ntBASIC2.11□□□□□ -2.07
Sf3b1Q99NB9 Gm24997-201ENSMUST00000157910 105 ntBASIC2.11□□□□□ -2.07
Sf3b1Q99NB9 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.11□□□□□ -2.07
Sf3b1Q99NB9 Ighv12-1-201ENSMUST00000195542 329 ntBASIC2.11□□□□□ -2.07
Sf3b1Q99NB9 Gm6059-201ENSMUST00000196903 340 ntBASIC2.11□□□□□ -2.07
Sf3b1Q99NB9 Mir7217-201ENSMUST00000200304 62 ntBASIC2.11□□□□□ -2.07
Sf3b1Q99NB9 Gm44818-201ENSMUST00000206608 358 ntBASIC2.11□□□□□ -2.07
Sf3b1Q99NB9 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.11□□□□□ -2.07
Sf3b1Q99NB9 AC130222.1-201ENSMUST00000221198 256 ntBASIC2.11□□□□□ -2.07
Sf3b1Q99NB9 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.11□□□□□ -2.07
Sf3b1Q99NB9 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC2.11□□□□□ -2.07
Sf3b1Q99NB9 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC2.11□□□□□ -2.07
Sf3b1Q99NB9 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.11□□□□□ -2.07
Sf3b1Q99NB9 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Sf3b1Q99NB9 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Sf3b1Q99NB9 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.11□□□□□ -2.07
Sf3b1Q99NB9 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
Sf3b1Q99NB9 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Sf3b1Q99NB9 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Sf3b1Q99NB9 Gm23422-201ENSMUST00000102000 107 ntBASIC2.1□□□□□ -2.07
Sf3b1Q99NB9 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC2.1□□□□□ -2.07
Sf3b1Q99NB9 Gm23010-201ENSMUST00000104151 126 ntBASIC2.1□□□□□ -2.07
Sf3b1Q99NB9 Gm15896-201ENSMUST00000118045 440 ntBASIC2.1□□□□□ -2.07
Sf3b1Q99NB9 Gm12053-201ENSMUST00000119022 252 ntBASIC2.1□□□□□ -2.07
Sf3b1Q99NB9 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Sf3b1Q99NB9 Gm25836-201ENSMUST00000158918 123 ntBASIC2.1□□□□□ -2.07
Sf3b1Q99NB9 Gm7258-201ENSMUST00000179317 300 ntBASIC2.1□□□□□ -2.07
Sf3b1Q99NB9 Mir7009-201ENSMUST00000184519 64 ntBASIC2.1□□□□□ -2.07
Sf3b1Q99NB9 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.1□□□□□ -2.07
Sf3b1Q99NB9 Gm42509-201ENSMUST00000197390 781 ntBASIC2.1□□□□□ -2.07
Sf3b1Q99NB9 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.1□□□□□ -2.07
Sf3b1Q99NB9 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.1□□□□□ -2.07
Sf3b1Q99NB9 Gm22572-201ENSMUST00000082985 105 ntBASIC2.1□□□□□ -2.07
Sf3b1Q99NB9 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Sf3b1Q99NB9 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.09□□□□□ -2.07
Sf3b1Q99NB9 Gm12806-201ENSMUST00000119384 268 ntBASIC2.09□□□□□ -2.08
Sf3b1Q99NB9 Gm14588-201ENSMUST00000119895 172 ntBASIC2.09□□□□□ -2.08
Sf3b1Q99NB9 Gm25339-201ENSMUST00000157458 232 ntBASIC2.09□□□□□ -2.08
Sf3b1Q99NB9 Gm23124-201ENSMUST00000157650 107 ntBASIC2.09□□□□□ -2.08
Sf3b1Q99NB9 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.09□□□□□ -2.08
Sf3b1Q99NB9 Gm43708-201ENSMUST00000198857 961 ntBASIC2.09□□□□□ -2.08
Sf3b1Q99NB9 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.09□□□□□ -2.08
Sf3b1Q99NB9 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC2.09□□□□□ -2.08
Sf3b1Q99NB9 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.09□□□□□ -2.08
Sf3b1Q99NB9 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.09□□□□□ -2.08
Sf3b1Q99NB9 AC123062.1-201ENSMUST00000221287 481 ntBASIC2.09□□□□□ -2.08
Sf3b1Q99NB9 Gm6109-201ENSMUST00000223297 348 ntBASIC2.09□□□□□ -2.08
Sf3b1Q99NB9 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.09□□□□□ -2.08
Sf3b1Q99NB9 Gm26922-201ENSMUST00000082687 72 ntBASIC2.09□□□□□ -2.08
Sf3b1Q99NB9 Gm22723-201ENSMUST00000083820 129 ntBASIC2.09□□□□□ -2.08
Sf3b1Q99NB9 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
Sf3b1Q99NB9 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC2.09□□□□□ -2.08
Sf3b1Q99NB9 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
Sf3b1Q99NB9 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Sf3b1Q99NB9 Gm22494-201ENSMUST00000104495 128 ntBASIC2.08□□□□□ -2.08
Sf3b1Q99NB9 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
Sf3b1Q99NB9 Gm23332-201ENSMUST00000157424 275 ntBASIC2.08□□□□□ -2.08
Sf3b1Q99NB9 Gm27396-201ENSMUST00000157708 58 ntBASIC2.08□□□□□ -2.08
Sf3b1Q99NB9 Gm22554-201ENSMUST00000157798 147 ntBASIC2.08□□□□□ -2.08
Sf3b1Q99NB9 Gm22535-201ENSMUST00000158174 119 ntBASIC2.08□□□□□ -2.08
Sf3b1Q99NB9 Gm25488-201ENSMUST00000158728 118 ntBASIC2.08□□□□□ -2.08
Sf3b1Q99NB9 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC2.08□□□□□ -2.08
Sf3b1Q99NB9 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
Sf3b1Q99NB9 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC2.08□□□□□ -2.08
Sf3b1Q99NB9 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC2.08□□□□□ -2.08
Sf3b1Q99NB9 Gm37641-201ENSMUST00000193837 239 ntBASIC2.08□□□□□ -2.08
Sf3b1Q99NB9 Mir3068-202ENSMUST00000197755 79 ntBASIC2.08□□□□□ -2.08
Sf3b1Q99NB9 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.08□□□□□ -2.08
Sf3b1Q99NB9 Gm45252-201ENSMUST00000211579 397 ntBASIC2.08□□□□□ -2.08
Sf3b1Q99NB9 AC164567.2-201ENSMUST00000219363 445 ntBASIC2.08□□□□□ -2.08
Sf3b1Q99NB9 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.08□□□□□ -2.08
Sf3b1Q99NB9 AC144733.1-201ENSMUST00000222893 1289 ntBASIC2.08□□□□□ -2.08
Sf3b1Q99NB9 Gm25124-201ENSMUST00000083345 164 ntBASIC2.08□□□□□ -2.08
Sf3b1Q99NB9 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Sf3b1Q99NB9 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Sf3b1Q99NB9 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Sf3b1Q99NB9 Mir1192-201ENSMUST00000116976 121 ntBASIC2.07□□□□□ -2.08
Sf3b1Q99NB9 Gm6182-201ENSMUST00000156439 1208 ntBASIC2.07□□□□□ -2.08
Sf3b1Q99NB9 Gm23324-201ENSMUST00000157421 131 ntBASIC2.07□□□□□ -2.08
Sf3b1Q99NB9 Gm22891-201ENSMUST00000158641 164 ntBASIC2.07□□□□□ -2.08
Sf3b1Q99NB9 Gm22631-201ENSMUST00000179656 94 ntBASIC2.07□□□□□ -2.08
Sf3b1Q99NB9 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC2.07□□□□□ -2.08
Sf3b1Q99NB9 Gm27660-201ENSMUST00000184028 208 ntBASIC2.07□□□□□ -2.08
Sf3b1Q99NB9 Mir6376-201ENSMUST00000185149 131 ntBASIC2.07□□□□□ -2.08
Sf3b1Q99NB9 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
Sf3b1Q99NB9 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC2.07□□□□□ -2.08
Sf3b1Q99NB9 Gm28745-201ENSMUST00000190069 305 ntBASIC2.07□□□□□ -2.08
Sf3b1Q99NB9 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC2.07□□□□□ -2.08
Sf3b1Q99NB9 Gm37557-201ENSMUST00000191640 139 ntBASIC2.07□□□□□ -2.08
Sf3b1Q99NB9 Gm37869-201ENSMUST00000193385 595 ntBASIC2.07□□□□□ -2.08
Sf3b1Q99NB9 Gm37361-201ENSMUST00000194345 132 ntBASIC2.07□□□□□ -2.08
Sf3b1Q99NB9 Gm29950-201ENSMUST00000195273 237 ntBASIC2.07□□□□□ -2.08
Sf3b1Q99NB9 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC2.07□□□□□ -2.08
Sf3b1Q99NB9 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Sf3b1Q99NB9 Gm45296-201ENSMUST00000209625 205 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms