Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.18□□□□□ -1.9
Rpap2Q8VC34 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Rpap2Q8VC34 Gm23941-201ENSMUST00000101953 107 ntBASIC3.18□□□□□ -1.9
Rpap2Q8VC34 Gm14448-201ENSMUST00000116383 210 ntBASIC3.18□□□□□ -1.9
Rpap2Q8VC34 Gm25316-201ENSMUST00000116826 118 ntBASIC3.18□□□□□ -1.9
Rpap2Q8VC34 Gm7123-201ENSMUST00000117647 213 ntBASIC3.18□□□□□ -1.9
Rpap2Q8VC34 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.18□□□□□ -1.9
Rpap2Q8VC34 Gm14841-201ENSMUST00000121067 758 ntBASIC3.18□□□□□ -1.9
Rpap2Q8VC34 Gm23184-201ENSMUST00000122594 131 ntBASIC3.18□□□□□ -1.9
Rpap2Q8VC34 Gm27926-201ENSMUST00000157180 66 ntBASIC3.18□□□□□ -1.9
Rpap2Q8VC34 Gm7871-201ENSMUST00000195346 618 ntBASIC3.18□□□□□ -1.9
Rpap2Q8VC34 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.18□□□□□ -1.9
Rpap2Q8VC34 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC3.18□□□□□ -1.9
Rpap2Q8VC34 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.18□□□□□ -1.9
Rpap2Q8VC34 Gm25202-201ENSMUST00000082838 191 ntBASIC3.18□□□□□ -1.9
Rpap2Q8VC34 Gm23850-201ENSMUST00000083830 169 ntBASIC3.18□□□□□ -1.9
Rpap2Q8VC34 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
Rpap2Q8VC34 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Rpap2Q8VC34 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.18□□□□□ -1.9
Rpap2Q8VC34 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.18□□□□□ -1.9
Rpap2Q8VC34 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Rpap2Q8VC34 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm23911-201ENSMUST00000104596 134 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm9009-201ENSMUST00000117321 326 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm13876-201ENSMUST00000118451 261 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm24839-201ENSMUST00000122602 107 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm25391-201ENSMUST00000157342 134 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm23668-201ENSMUST00000157465 111 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm26215-201ENSMUST00000158584 139 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm17062-201ENSMUST00000166987 461 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm29512-201ENSMUST00000185544 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm28110-201ENSMUST00000185782 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm28838-201ENSMUST00000186338 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm29057-201ENSMUST00000186468 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm29661-201ENSMUST00000186781 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm28737-201ENSMUST00000186808 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm29118-201ENSMUST00000186908 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm28433-201ENSMUST00000187085 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm29635-201ENSMUST00000187221 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm28759-201ENSMUST00000187621 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm28831-201ENSMUST00000187739 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm28200-201ENSMUST00000187778 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm29026-201ENSMUST00000187787 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm18357-201ENSMUST00000188184 580 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm28752-201ENSMUST00000188340 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm28797-201ENSMUST00000188543 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm28855-201ENSMUST00000188680 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm29378-201ENSMUST00000188723 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm28569-201ENSMUST00000188748 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm28120-201ENSMUST00000188812 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm28369-201ENSMUST00000188993 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm29037-201ENSMUST00000189092 313 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm28909-201ENSMUST00000189406 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm28705-201ENSMUST00000189548 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm28861-201ENSMUST00000189681 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm29180-201ENSMUST00000190003 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm28939-201ENSMUST00000190351 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm28223-201ENSMUST00000190469 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm29575-201ENSMUST00000190597 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm29092-201ENSMUST00000190768 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm29469-201ENSMUST00000191448 315 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm43955-201ENSMUST00000204332 142 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm19563-201ENSMUST00000222031 270 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Snora23-201ENSMUST00000082517 184 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm23615-201ENSMUST00000082602 65 ntBASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Rpap2Q8VC34 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.16□□□□□ -1.9
Rpap2Q8VC34 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Rpap2Q8VC34 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Rpap2Q8VC34 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Rpap2Q8VC34 Gm15215-201ENSMUST00000117773 489 ntBASIC3.16□□□□□ -1.9
Rpap2Q8VC34 Gm8580-201ENSMUST00000160295 464 ntBASIC3.16□□□□□ -1.9
Rpap2Q8VC34 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC3.16□□□□□ -1.9
Rpap2Q8VC34 Gm9696-202ENSMUST00000191541 830 ntBASIC3.16□□□□□ -1.9
Rpap2Q8VC34 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC3.16□□□□□ -1.9
Rpap2Q8VC34 Gm37007-201ENSMUST00000194234 319 ntBASIC3.16□□□□□ -1.9
Rpap2Q8VC34 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC3.16□□□□□ -1.9
Rpap2Q8VC34 Gm44657-201ENSMUST00000208568 450 ntBASIC3.16□□□□□ -1.9
Rpap2Q8VC34 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.16□□□□□ -1.9
Rpap2Q8VC34 Gm23451-201ENSMUST00000083328 122 ntBASIC3.16□□□□□ -1.9
Rpap2Q8VC34 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
Rpap2Q8VC34 Gm37096-201ENSMUST00000192317 2058 ntBASIC3.16□□□□□ -1.9
Rpap2Q8VC34 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC3.16□□□□□ -1.9
Rpap2Q8VC34 Gm19428-201ENSMUST00000220512 1995 ntBASIC3.16□□□□□ -1.9
Rpap2Q8VC34 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
Rpap2Q8VC34 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Rpap2Q8VC34 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.15□□□□□ -1.9
Rpap2Q8VC34 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Rpap2Q8VC34 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Rpap2Q8VC34 Gm13329-201ENSMUST00000117063 265 ntBASIC3.15□□□□□ -1.91
Rpap2Q8VC34 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.15□□□□□ -1.91
Rpap2Q8VC34 Gm11785-201ENSMUST00000120165 601 ntBASIC3.15□□□□□ -1.91
Rpap2Q8VC34 Gm15272-201ENSMUST00000120865 233 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 130.8 ms