Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC0.54□□□□□ -2.32
Ccdc58Q8R3Q6 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC0.54□□□□□ -2.32
Ccdc58Q8R3Q6 Gm27326-201ENSMUST00000183504 95 ntBASIC0.54□□□□□ -2.32
Ccdc58Q8R3Q6 Gm28995-201ENSMUST00000186625 261 ntBASIC0.54□□□□□ -2.32
Ccdc58Q8R3Q6 Gm37801-201ENSMUST00000194754 274 ntBASIC0.54□□□□□ -2.32
Ccdc58Q8R3Q6 Gm35736-201ENSMUST00000203681 313 ntBASIC0.54□□□□□ -2.32
Ccdc58Q8R3Q6 Gm44564-201ENSMUST00000207985 180 ntBASIC0.54□□□□□ -2.32
Ccdc58Q8R3Q6 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC0.54□□□□□ -2.32
Ccdc58Q8R3Q6 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.54□□□□□ -2.32
Ccdc58Q8R3Q6 Gm18039-201ENSMUST00000217816 728 ntBASIC0.54□□□□□ -2.32
Ccdc58Q8R3Q6 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC0.54□□□□□ -2.32
Ccdc58Q8R3Q6 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
Ccdc58Q8R3Q6 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC0.54□□□□□ -2.32
Ccdc58Q8R3Q6 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
Ccdc58Q8R3Q6 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
Ccdc58Q8R3Q6 Gm4732-201ENSMUST00000118778 473 ntBASIC0.53□□□□□ -2.32
Ccdc58Q8R3Q6 Gm14554-201ENSMUST00000119548 661 ntBASIC0.53□□□□□ -2.32
Ccdc58Q8R3Q6 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC0.53□□□□□ -2.32
Ccdc58Q8R3Q6 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
Ccdc58Q8R3Q6 Gm23329-201ENSMUST00000157415 108 ntBASIC0.53□□□□□ -2.32
Ccdc58Q8R3Q6 Gm22731-201ENSMUST00000158086 94 ntBASIC0.53□□□□□ -2.32
Ccdc58Q8R3Q6 Gm25715-201ENSMUST00000158627 125 ntBASIC0.53□□□□□ -2.32
Ccdc58Q8R3Q6 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC0.53□□□□□ -2.32
Ccdc58Q8R3Q6 Gm24573-201ENSMUST00000175499 112 ntBASIC0.53□□□□□ -2.32
Ccdc58Q8R3Q6 Gm42570-201ENSMUST00000195937 292 ntBASIC0.53□□□□□ -2.32
Ccdc58Q8R3Q6 Gm42509-201ENSMUST00000197390 781 ntBASIC0.53□□□□□ -2.32
Ccdc58Q8R3Q6 Mir3087-201ENSMUST00000199405 56 ntBASIC0.53□□□□□ -2.32
Ccdc58Q8R3Q6 Gm22302-201ENSMUST00000082657 106 ntBASIC0.53□□□□□ -2.32
Ccdc58Q8R3Q6 Gm22444-201ENSMUST00000093693 108 ntBASIC0.53□□□□□ -2.32
Ccdc58Q8R3Q6 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.33
Ccdc58Q8R3Q6 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.33
Ccdc58Q8R3Q6 Gm11572-201ENSMUST00000119164 120 ntBASIC0.52□□□□□ -2.33
Ccdc58Q8R3Q6 Fau-ps1-201ENSMUST00000119675 252 ntBASIC0.52□□□□□ -2.33
Ccdc58Q8R3Q6 Gm14915-201ENSMUST00000120747 204 ntBASIC0.52□□□□□ -2.33
Ccdc58Q8R3Q6 Gm22960-201ENSMUST00000122517 104 ntBASIC0.52□□□□□ -2.33
Ccdc58Q8R3Q6 Gm16265-201ENSMUST00000134558 108 ntBASIC0.52□□□□□ -2.33
Ccdc58Q8R3Q6 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Ccdc58Q8R3Q6 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC0.52□□□□□ -2.33
Ccdc58Q8R3Q6 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC0.52□□□□□ -2.33
Ccdc58Q8R3Q6 Gm42533-201ENSMUST00000196247 157 ntBASIC0.52□□□□□ -2.33
Ccdc58Q8R3Q6 Gm43250-201ENSMUST00000196536 273 ntBASIC0.52□□□□□ -2.33
Ccdc58Q8R3Q6 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.52□□□□□ -2.33
Ccdc58Q8R3Q6 AC188459.1-201ENSMUST00000216651 300 ntBASIC0.52□□□□□ -2.33
Ccdc58Q8R3Q6 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC0.52□□□□□ -2.33
Ccdc58Q8R3Q6 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Ccdc58Q8R3Q6 Mir196b-201ENSMUST00000083509 85 ntBASIC0.52□□□□□ -2.33
Ccdc58Q8R3Q6 Gm13454-201ENSMUST00000118166 483 ntBASIC0.51□□□□□ -2.33
Ccdc58Q8R3Q6 Gm14694-201ENSMUST00000121856 282 ntBASIC0.51□□□□□ -2.33
Ccdc58Q8R3Q6 Gm25220-201ENSMUST00000157546 95 ntBASIC0.51□□□□□ -2.33
Ccdc58Q8R3Q6 Gm25020-201ENSMUST00000178071 107 ntBASIC0.51□□□□□ -2.33
Ccdc58Q8R3Q6 Gm19649-201ENSMUST00000201126 822 ntBASIC0.51□□□□□ -2.33
Ccdc58Q8R3Q6 Gm2628-201ENSMUST00000218019 426 ntBASIC0.51□□□□□ -2.33
Ccdc58Q8R3Q6 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.51□□□□□ -2.33
Ccdc58Q8R3Q6 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
Ccdc58Q8R3Q6 Gm25810-201ENSMUST00000082752 108 ntBASIC0.51□□□□□ -2.33
Ccdc58Q8R3Q6 Gm25126-201ENSMUST00000083343 102 ntBASIC0.51□□□□□ -2.33
Ccdc58Q8R3Q6 Gm24494-201ENSMUST00000083804 81 ntBASIC0.51□□□□□ -2.33
Ccdc58Q8R3Q6 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
Ccdc58Q8R3Q6 Gm22779-201ENSMUST00000104085 107 ntBASIC0.5□□□□□ -2.33
Ccdc58Q8R3Q6 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
Ccdc58Q8R3Q6 Gm22091-201ENSMUST00000116908 127 ntBASIC0.5□□□□□ -2.33
Ccdc58Q8R3Q6 Gm26038-201ENSMUST00000158151 106 ntBASIC0.5□□□□□ -2.33
Ccdc58Q8R3Q6 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC0.5□□□□□ -2.33
Ccdc58Q8R3Q6 Gm25243-201ENSMUST00000174912 207 ntBASIC0.5□□□□□ -2.33
Ccdc58Q8R3Q6 Gm23967-201ENSMUST00000175062 78 ntBASIC0.5□□□□□ -2.33
Ccdc58Q8R3Q6 Gm18415-201ENSMUST00000177464 647 ntBASIC0.5□□□□□ -2.33
Ccdc58Q8R3Q6 Gm21815-201ENSMUST00000178213 664 ntBASIC0.5□□□□□ -2.33
Ccdc58Q8R3Q6 Gm28843-201ENSMUST00000189198 678 ntBASIC0.5□□□□□ -2.33
Ccdc58Q8R3Q6 Gm29546-201ENSMUST00000191171 678 ntBASIC0.5□□□□□ -2.33
Ccdc58Q8R3Q6 Gm44011-201ENSMUST00000203336 394 ntBASIC0.5□□□□□ -2.33
Ccdc58Q8R3Q6 Gm43955-201ENSMUST00000204332 142 ntBASIC0.5□□□□□ -2.33
Ccdc58Q8R3Q6 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.5□□□□□ -2.33
Ccdc58Q8R3Q6 Gm46993-201ENSMUST00000220708 259 ntBASIC0.5□□□□□ -2.33
Ccdc58Q8R3Q6 Gm25636-201ENSMUST00000082666 133 ntBASIC0.5□□□□□ -2.33
Ccdc58Q8R3Q6 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
Ccdc58Q8R3Q6 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
Ccdc58Q8R3Q6 Mir544-201ENSMUST00000103813 78 ntBASIC0.49□□□□□ -2.33
Ccdc58Q8R3Q6 Gm25506-201ENSMUST00000104339 70 ntBASIC0.49□□□□□ -2.33
Ccdc58Q8R3Q6 Gm14879-201ENSMUST00000117308 507 ntBASIC0.49□□□□□ -2.33
Ccdc58Q8R3Q6 Gm15090-201ENSMUST00000118787 1196 ntBASIC0.49□□□□□ -2.33
Ccdc58Q8R3Q6 Gm12053-201ENSMUST00000119022 252 ntBASIC0.49□□□□□ -2.33
Ccdc58Q8R3Q6 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.49□□□□□ -2.33
Ccdc58Q8R3Q6 Gm15089-201ENSMUST00000122332 1196 ntBASIC0.49□□□□□ -2.33
Ccdc58Q8R3Q6 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
Ccdc58Q8R3Q6 Gm8207-201ENSMUST00000171204 502 ntBASIC0.49□□□□□ -2.33
Ccdc58Q8R3Q6 Gm21744-201ENSMUST00000178403 662 ntBASIC0.49□□□□□ -2.33
Ccdc58Q8R3Q6 Gm29389-201ENSMUST00000191562 352 ntBASIC0.49□□□□□ -2.33
Ccdc58Q8R3Q6 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC0.49□□□□□ -2.33
Ccdc58Q8R3Q6 Gm31849-201ENSMUST00000220306 375 ntBASIC0.49□□□□□ -2.33
Ccdc58Q8R3Q6 Gm26265-201ENSMUST00000083277 135 ntBASIC0.49□□□□□ -2.33
Ccdc58Q8R3Q6 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
Ccdc58Q8R3Q6 Gm14445-201ENSMUST00000117051 1484 ntBASIC0.48□□□□□ -2.33
Ccdc58Q8R3Q6 Gm24582-201ENSMUST00000103967 103 ntBASIC0.48□□□□□ -2.33
Ccdc58Q8R3Q6 Gm22785-201ENSMUST00000104087 132 ntBASIC0.48□□□□□ -2.33
Ccdc58Q8R3Q6 Gm23836-201ENSMUST00000104434 129 ntBASIC0.48□□□□□ -2.33
Ccdc58Q8R3Q6 Gm24588-201ENSMUST00000116696 83 ntBASIC0.48□□□□□ -2.33
Ccdc58Q8R3Q6 Gm22678-201ENSMUST00000116974 101 ntBASIC0.48□□□□□ -2.33
Ccdc58Q8R3Q6 Gm13457-201ENSMUST00000117885 267 ntBASIC0.48□□□□□ -2.33
Ccdc58Q8R3Q6 Gm23328-201ENSMUST00000157418 132 ntBASIC0.48□□□□□ -2.33
Ccdc58Q8R3Q6 Gm23760-201ENSMUST00000158350 116 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms