Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.28□□□□□ -1.88
Clrn1Q8K445 Mdga2-203ENSMUST00000113942 423 ntBASIC3.28□□□□□ -1.88
Clrn1Q8K445 Gm12934-201ENSMUST00000119221 343 ntBASIC3.28□□□□□ -1.88
Clrn1Q8K445 Gm23331-201ENSMUST00000157423 108 ntBASIC3.28□□□□□ -1.88
Clrn1Q8K445 Gm23592-201ENSMUST00000157859 117 ntBASIC3.28□□□□□ -1.88
Clrn1Q8K445 Gm23666-201ENSMUST00000158053 116 ntBASIC3.28□□□□□ -1.88
Clrn1Q8K445 Gm24392-201ENSMUST00000158136 103 ntBASIC3.28□□□□□ -1.88
Clrn1Q8K445 Gm22521-201ENSMUST00000158272 134 ntBASIC3.28□□□□□ -1.88
Clrn1Q8K445 Gm24667-201ENSMUST00000158938 103 ntBASIC3.28□□□□□ -1.88
Clrn1Q8K445 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Clrn1Q8K445 Gm25024-201ENSMUST00000179667 104 ntBASIC3.28□□□□□ -1.88
Clrn1Q8K445 Mir6715-201ENSMUST00000184990 57 ntBASIC3.28□□□□□ -1.88
Clrn1Q8K445 Gm28825-201ENSMUST00000186233 238 ntBASIC3.28□□□□□ -1.88
Clrn1Q8K445 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.28□□□□□ -1.88
Clrn1Q8K445 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Clrn1Q8K445 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.28□□□□□ -1.88
Clrn1Q8K445 Gm44703-201ENSMUST00000205724 248 ntBASIC3.28□□□□□ -1.88
Clrn1Q8K445 Gm45687-201ENSMUST00000209454 155 ntBASIC3.28□□□□□ -1.88
Clrn1Q8K445 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.28□□□□□ -1.88
Clrn1Q8K445 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC3.28□□□□□ -1.88
Clrn1Q8K445 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.28□□□□□ -1.88
Clrn1Q8K445 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Clrn1Q8K445 Snora31-201ENSMUST00000083213 130 ntBASIC3.28□□□□□ -1.88
Clrn1Q8K445 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Clrn1Q8K445 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Clrn1Q8K445 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.28□□□□□ -1.88
Clrn1Q8K445 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.27□□□□□ -1.89
Clrn1Q8K445 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.27□□□□□ -1.89
Clrn1Q8K445 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.27□□□□□ -1.89
Clrn1Q8K445 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Clrn1Q8K445 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Clrn1Q8K445 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Clrn1Q8K445 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Clrn1Q8K445 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Clrn1Q8K445 Gm24116-201ENSMUST00000103975 107 ntBASIC3.27□□□□□ -1.89
Clrn1Q8K445 Gm13432-201ENSMUST00000118861 241 ntBASIC3.27□□□□□ -1.89
Clrn1Q8K445 Gm13419-201ENSMUST00000121711 271 ntBASIC3.27□□□□□ -1.89
Clrn1Q8K445 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.27□□□□□ -1.89
Clrn1Q8K445 Gm23982-201ENSMUST00000157141 106 ntBASIC3.27□□□□□ -1.89
Clrn1Q8K445 Gm23755-201ENSMUST00000157578 343 ntBASIC3.27□□□□□ -1.89
Clrn1Q8K445 Gm25428-201ENSMUST00000157608 114 ntBASIC3.27□□□□□ -1.89
Clrn1Q8K445 Gm28020-201ENSMUST00000157739 67 ntBASIC3.27□□□□□ -1.89
Clrn1Q8K445 Gm22766-201ENSMUST00000158372 99 ntBASIC3.27□□□□□ -1.89
Clrn1Q8K445 Gm24739-201ENSMUST00000158855 292 ntBASIC3.27□□□□□ -1.89
Clrn1Q8K445 Gm23775-201ENSMUST00000158991 249 ntBASIC3.27□□□□□ -1.89
Clrn1Q8K445 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.27□□□□□ -1.89
Clrn1Q8K445 Gm25817-201ENSMUST00000177758 121 ntBASIC3.27□□□□□ -1.89
Clrn1Q8K445 Gm24766-201ENSMUST00000179182 121 ntBASIC3.27□□□□□ -1.89
Clrn1Q8K445 Gm27773-201ENSMUST00000184087 78 ntBASIC3.27□□□□□ -1.89
Clrn1Q8K445 Gm43814-201ENSMUST00000197851 413 ntBASIC3.27□□□□□ -1.89
Clrn1Q8K445 Gm6842-201ENSMUST00000211361 390 ntBASIC3.27□□□□□ -1.89
Clrn1Q8K445 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.27□□□□□ -1.89
Clrn1Q8K445 Gm25800-201ENSMUST00000082636 134 ntBASIC3.27□□□□□ -1.89
Clrn1Q8K445 Gm25856-201ENSMUST00000082786 75 ntBASIC3.27□□□□□ -1.89
Clrn1Q8K445 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.27□□□□□ -1.89
Clrn1Q8K445 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.27□□□□□ -1.89
Clrn1Q8K445 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.27□□□□□ -1.89
Clrn1Q8K445 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Clrn1Q8K445 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Clrn1Q8K445 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Clrn1Q8K445 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC3.26□□□□□ -1.89
Clrn1Q8K445 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm14811-201ENSMUST00000117070 117 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm7123-201ENSMUST00000117647 213 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm12722-201ENSMUST00000118507 493 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm14845-201ENSMUST00000121259 306 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm25543-201ENSMUST00000122678 312 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm25805-201ENSMUST00000122788 108 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm22320-201ENSMUST00000157149 312 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm27592-201ENSMUST00000157729 126 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm24006-201ENSMUST00000158462 132 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm16326-201ENSMUST00000162843 414 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm22174-201ENSMUST00000175050 125 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm22692-201ENSMUST00000175055 125 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm27634-201ENSMUST00000175060 126 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm26460-201ENSMUST00000175061 126 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm22460-201ENSMUST00000175269 124 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm26141-201ENSMUST00000175299 126 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm25535-201ENSMUST00000175364 125 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm24365-201ENSMUST00000175384 125 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm44310-201ENSMUST00000175424 126 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm25748-201ENSMUST00000175487 70 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm22639-201ENSMUST00000175591 125 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Spin2g-201ENSMUST00000178425 687 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm24979-201ENSMUST00000178626 126 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm27869-201ENSMUST00000184327 122 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Mir6540-201ENSMUST00000184886 108 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm27743-201ENSMUST00000185136 126 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm30341-201ENSMUST00000194363 289 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm43680-201ENSMUST00000199466 340 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.26□□□□□ -1.89
Clrn1Q8K445 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm7065-201ENSMUST00000222150 474 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Mir137-201ENSMUST00000083635 73 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.26□□□□□ -1.89
Clrn1Q8K445 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms