Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm42805-201ENSMUST00000196158 276 ntBASIC1.32□□□□□ -2.2
Ccdc28aQ8CEI3 Gm44395-201ENSMUST00000197056 153 ntBASIC1.32□□□□□ -2.2
Ccdc28aQ8CEI3 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC1.32□□□□□ -2.2
Ccdc28aQ8CEI3 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.32□□□□□ -2.2
Ccdc28aQ8CEI3 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.32□□□□□ -2.2
Ccdc28aQ8CEI3 AC123656.2-201ENSMUST00000226726 227 ntBASIC1.32□□□□□ -2.2
Ccdc28aQ8CEI3 AC113031.5-201ENSMUST00000227116 606 ntBASIC1.32□□□□□ -2.2
Ccdc28aQ8CEI3 AC134335.1-201ENSMUST00000227626 329 ntBASIC1.32□□□□□ -2.2
Ccdc28aQ8CEI3 AC162910.1-201ENSMUST00000221219 1723 ntBASIC1.32□□□□□ -2.2
Ccdc28aQ8CEI3 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.31□□□□□ -2.2
Ccdc28aQ8CEI3 Gm26147-201ENSMUST00000104479 114 ntBASIC1.31□□□□□ -2.2
Ccdc28aQ8CEI3 Gm15714-201ENSMUST00000117168 250 ntBASIC1.31□□□□□ -2.2
Ccdc28aQ8CEI3 Gm11845-201ENSMUST00000117886 327 ntBASIC1.31□□□□□ -2.2
Ccdc28aQ8CEI3 Gm23713-201ENSMUST00000157353 70 ntBASIC1.31□□□□□ -2.2
Ccdc28aQ8CEI3 Gm22615-201ENSMUST00000158102 70 ntBASIC1.31□□□□□ -2.2
Ccdc28aQ8CEI3 Gm25365-201ENSMUST00000158852 121 ntBASIC1.31□□□□□ -2.2
Ccdc28aQ8CEI3 Gm25730-201ENSMUST00000178753 165 ntBASIC1.31□□□□□ -2.2
Ccdc28aQ8CEI3 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.31□□□□□ -2.2
Ccdc28aQ8CEI3 Ighv1-46-201ENSMUST00000193988 351 ntBASIC1.31□□□□□ -2.2
Ccdc28aQ8CEI3 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Ccdc28aQ8CEI3 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Ccdc28aQ8CEI3 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC1.31□□□□□ -2.2
Ccdc28aQ8CEI3 Gm45240-201ENSMUST00000211437 674 ntBASIC1.31□□□□□ -2.2
Ccdc28aQ8CEI3 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.31□□□□□ -2.2
Ccdc28aQ8CEI3 Gm9973-202ENSMUST00000220926 166 ntBASIC1.31□□□□□ -2.2
Ccdc28aQ8CEI3 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.31□□□□□ -2.2
Ccdc28aQ8CEI3 AC154506.3-201ENSMUST00000225417 213 ntBASIC1.31□□□□□ -2.2
Ccdc28aQ8CEI3 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.31□□□□□ -2.2
Ccdc28aQ8CEI3 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.31□□□□□ -2.2
Ccdc28aQ8CEI3 Gm25409-201ENSMUST00000083764 131 ntBASIC1.31□□□□□ -2.2
Ccdc28aQ8CEI3 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Ccdc28aQ8CEI3 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Ccdc28aQ8CEI3 Gm13885-201ENSMUST00000117569 187 ntBASIC1.3□□□□□ -2.2
Ccdc28aQ8CEI3 AA413626-201ENSMUST00000121125 494 ntBASIC1.3□□□□□ -2.2
Ccdc28aQ8CEI3 Gm14530-201ENSMUST00000122391 333 ntBASIC1.3□□□□□ -2.2
Ccdc28aQ8CEI3 Gm16129-201ENSMUST00000152628 486 ntBASIC1.3□□□□□ -2.2
Ccdc28aQ8CEI3 Gm26049-201ENSMUST00000157313 108 ntBASIC1.3□□□□□ -2.2
Ccdc28aQ8CEI3 Gm25557-201ENSMUST00000158084 315 ntBASIC1.3□□□□□ -2.2
Ccdc28aQ8CEI3 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.3□□□□□ -2.2
Ccdc28aQ8CEI3 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Ccdc28aQ8CEI3 Mir6335-201ENSMUST00000184081 98 ntBASIC1.3□□□□□ -2.2
Ccdc28aQ8CEI3 Gm27588-201ENSMUST00000185096 263 ntBASIC1.3□□□□□ -2.2
Ccdc28aQ8CEI3 Gm28438-201ENSMUST00000188299 345 ntBASIC1.3□□□□□ -2.2
Ccdc28aQ8CEI3 Gm37579-201ENSMUST00000194291 142 ntBASIC1.3□□□□□ -2.2
Ccdc28aQ8CEI3 Gm44483-201ENSMUST00000197203 97 ntBASIC1.3□□□□□ -2.2
Ccdc28aQ8CEI3 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Ccdc28aQ8CEI3 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.3□□□□□ -2.2
Ccdc28aQ8CEI3 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC1.3□□□□□ -2.2
Ccdc28aQ8CEI3 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Ccdc28aQ8CEI3 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
Ccdc28aQ8CEI3 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.3□□□□□ -2.2
Ccdc28aQ8CEI3 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.29□□□□□ -2.2
Ccdc28aQ8CEI3 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Ccdc28aQ8CEI3 Gm11857-201ENSMUST00000119817 324 ntBASIC1.29□□□□□ -2.2
Ccdc28aQ8CEI3 Gm14428-201ENSMUST00000120408 822 ntBASIC1.29□□□□□ -2.2
Ccdc28aQ8CEI3 Gm14215-201ENSMUST00000120578 221 ntBASIC1.29□□□□□ -2.2
Ccdc28aQ8CEI3 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.29□□□□□ -2.2
Ccdc28aQ8CEI3 Gm25888-201ENSMUST00000157778 302 ntBASIC1.29□□□□□ -2.2
Ccdc28aQ8CEI3 Gm17054-201ENSMUST00000169811 259 ntBASIC1.29□□□□□ -2.2
Ccdc28aQ8CEI3 Gm25020-201ENSMUST00000178071 107 ntBASIC1.29□□□□□ -2.2
Ccdc28aQ8CEI3 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC1.29□□□□□ -2.2
Ccdc28aQ8CEI3 Gm45296-201ENSMUST00000209625 205 ntBASIC1.29□□□□□ -2.2
Ccdc28aQ8CEI3 AC091260.1-201ENSMUST00000216112 229 ntBASIC1.29□□□□□ -2.2
Ccdc28aQ8CEI3 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.29□□□□□ -2.2
Ccdc28aQ8CEI3 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Ccdc28aQ8CEI3 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.29□□□□□ -2.2
Ccdc28aQ8CEI3 AC122341.1-201ENSMUST00000227291 560 ntBASIC1.29□□□□□ -2.2
Ccdc28aQ8CEI3 Gm22980-201ENSMUST00000082608 70 ntBASIC1.29□□□□□ -2.2
Ccdc28aQ8CEI3 Gm23042-201ENSMUST00000083866 101 ntBASIC1.29□□□□□ -2.2
Ccdc28aQ8CEI3 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC1.28□□□□□ -2.2
Ccdc28aQ8CEI3 Gm23744-201ENSMUST00000104231 149 ntBASIC1.28□□□□□ -2.2
Ccdc28aQ8CEI3 Gm25495-201ENSMUST00000104431 131 ntBASIC1.28□□□□□ -2.2
Ccdc28aQ8CEI3 Gm12106-201ENSMUST00000116006 1200 ntBASIC1.28□□□□□ -2.2
Ccdc28aQ8CEI3 Gm15175-201ENSMUST00000117629 132 ntBASIC1.28□□□□□ -2.2
Ccdc28aQ8CEI3 Gm14943-201ENSMUST00000118056 546 ntBASIC1.28□□□□□ -2.2
Ccdc28aQ8CEI3 Gm6025-201ENSMUST00000121517 201 ntBASIC1.28□□□□□ -2.2
Ccdc28aQ8CEI3 Gm15309-201ENSMUST00000121644 240 ntBASIC1.28□□□□□ -2.2
Ccdc28aQ8CEI3 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
Ccdc28aQ8CEI3 Gm23956-201ENSMUST00000157211 119 ntBASIC1.28□□□□□ -2.2
Ccdc28aQ8CEI3 Gm23078-201ENSMUST00000157848 148 ntBASIC1.28□□□□□ -2.2
Ccdc28aQ8CEI3 Gm22485-201ENSMUST00000157990 109 ntBASIC1.28□□□□□ -2.2
Ccdc28aQ8CEI3 Spanxn4-201ENSMUST00000172433 424 ntBASIC1.28□□□□□ -2.2
Ccdc28aQ8CEI3 Gm25243-201ENSMUST00000174912 207 ntBASIC1.28□□□□□ -2.2
Ccdc28aQ8CEI3 Gm22584-201ENSMUST00000177935 92 ntBASIC1.28□□□□□ -2.2
Ccdc28aQ8CEI3 Mir3068-202ENSMUST00000197755 79 ntBASIC1.28□□□□□ -2.2
Ccdc28aQ8CEI3 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.28□□□□□ -2.2
Ccdc28aQ8CEI3 Gm18160-201ENSMUST00000214279 827 ntBASIC1.28□□□□□ -2.2
Ccdc28aQ8CEI3 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.28□□□□□ -2.2
Ccdc28aQ8CEI3 Mir211-201ENSMUST00000083651 106 ntBASIC1.28□□□□□ -2.2
Ccdc28aQ8CEI3 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.28□□□□□ -2.2
Ccdc28aQ8CEI3 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Ccdc28aQ8CEI3 Mir653-201ENSMUST00000102402 85 ntBASIC1.27□□□□□ -2.21
Ccdc28aQ8CEI3 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Ccdc28aQ8CEI3 Gm15167-201ENSMUST00000121997 187 ntBASIC1.27□□□□□ -2.21
Ccdc28aQ8CEI3 Gm23429-201ENSMUST00000122486 149 ntBASIC1.27□□□□□ -2.21
Ccdc28aQ8CEI3 Gm6956-201ENSMUST00000134724 546 ntBASIC1.27□□□□□ -2.21
Ccdc28aQ8CEI3 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Ccdc28aQ8CEI3 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC1.27□□□□□ -2.21
Ccdc28aQ8CEI3 Gm26271-201ENSMUST00000158349 104 ntBASIC1.27□□□□□ -2.21
Ccdc28aQ8CEI3 Gm24177-201ENSMUST00000158927 131 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms