Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm29231-201ENSMUST00000179850 319 ntBASIC1.34□□□□□ -2.19
Trub1Q8C0D0 Gm21064-202ENSMUST00000190583 278 ntBASIC1.34□□□□□ -2.19
Trub1Q8C0D0 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.34□□□□□ -2.19
Trub1Q8C0D0 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.33□□□□□ -2.2
Trub1Q8C0D0 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.33□□□□□ -2.2
Trub1Q8C0D0 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.33□□□□□ -2.2
Trub1Q8C0D0 Gm23744-201ENSMUST00000104231 149 ntBASIC1.33□□□□□ -2.2
Trub1Q8C0D0 Gm15714-201ENSMUST00000117168 250 ntBASIC1.33□□□□□ -2.2
Trub1Q8C0D0 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.33□□□□□ -2.2
Trub1Q8C0D0 Gm14835-201ENSMUST00000119039 315 ntBASIC1.33□□□□□ -2.2
Trub1Q8C0D0 Gm11359-201ENSMUST00000120039 567 ntBASIC1.33□□□□□ -2.2
Trub1Q8C0D0 Gm16412-201ENSMUST00000121602 273 ntBASIC1.33□□□□□ -2.2
Trub1Q8C0D0 Gm23034-201ENSMUST00000158001 147 ntBASIC1.33□□□□□ -2.2
Trub1Q8C0D0 Gm10177-202ENSMUST00000161698 207 ntBASIC1.33□□□□□ -2.2
Trub1Q8C0D0 Gm24713-201ENSMUST00000178850 107 ntBASIC1.33□□□□□ -2.2
Trub1Q8C0D0 Gm25448-201ENSMUST00000180065 107 ntBASIC1.33□□□□□ -2.2
Trub1Q8C0D0 Mir7050-201ENSMUST00000184636 60 ntBASIC1.33□□□□□ -2.2
Trub1Q8C0D0 Gm29603-201ENSMUST00000186792 334 ntBASIC1.33□□□□□ -2.2
Trub1Q8C0D0 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC1.33□□□□□ -2.2
Trub1Q8C0D0 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC1.33□□□□□ -2.2
Trub1Q8C0D0 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.33□□□□□ -2.2
Trub1Q8C0D0 AC140477.1-201ENSMUST00000222354 246 ntBASIC1.33□□□□□ -2.2
Trub1Q8C0D0 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.33□□□□□ -2.2
Trub1Q8C0D0 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.33□□□□□ -2.2
Trub1Q8C0D0 Gm22810-201ENSMUST00000082741 158 ntBASIC1.33□□□□□ -2.2
Trub1Q8C0D0 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.33□□□□□ -2.2
Trub1Q8C0D0 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.33□□□□□ -2.2
Trub1Q8C0D0 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.32□□□□□ -2.2
Trub1Q8C0D0 Gm26080-201ENSMUST00000104069 131 ntBASIC1.32□□□□□ -2.2
Trub1Q8C0D0 Gm23202-201ENSMUST00000104376 129 ntBASIC1.32□□□□□ -2.2
Trub1Q8C0D0 Gm15162-201ENSMUST00000119325 283 ntBASIC1.32□□□□□ -2.2
Trub1Q8C0D0 Gm6587-201ENSMUST00000120219 613 ntBASIC1.32□□□□□ -2.2
Trub1Q8C0D0 Gm14428-201ENSMUST00000120408 822 ntBASIC1.32□□□□□ -2.2
Trub1Q8C0D0 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.32□□□□□ -2.2
Trub1Q8C0D0 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC1.32□□□□□ -2.2
Trub1Q8C0D0 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC1.32□□□□□ -2.2
Trub1Q8C0D0 Gm24262-201ENSMUST00000157431 144 ntBASIC1.32□□□□□ -2.2
Trub1Q8C0D0 Gm24997-201ENSMUST00000157910 105 ntBASIC1.32□□□□□ -2.2
Trub1Q8C0D0 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.32□□□□□ -2.2
Trub1Q8C0D0 Gm16162-201ENSMUST00000162296 297 ntBASIC1.32□□□□□ -2.2
Trub1Q8C0D0 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Trub1Q8C0D0 Gm28453-203ENSMUST00000187041 189 ntBASIC1.32□□□□□ -2.2
Trub1Q8C0D0 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.32□□□□□ -2.2
Trub1Q8C0D0 Gm44483-201ENSMUST00000197203 97 ntBASIC1.32□□□□□ -2.2
Trub1Q8C0D0 Gm44615-201ENSMUST00000206548 358 ntBASIC1.32□□□□□ -2.2
Trub1Q8C0D0 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.32□□□□□ -2.2
Trub1Q8C0D0 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
Trub1Q8C0D0 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.32□□□□□ -2.2
Trub1Q8C0D0 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Trub1Q8C0D0 Gm25131-201ENSMUST00000082653 151 ntBASIC1.32□□□□□ -2.2
Trub1Q8C0D0 Mir211-201ENSMUST00000083651 106 ntBASIC1.32□□□□□ -2.2
Trub1Q8C0D0 Gm25409-201ENSMUST00000083764 131 ntBASIC1.32□□□□□ -2.2
Trub1Q8C0D0 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.32□□□□□ -2.2
Trub1Q8C0D0 Gm19428-201ENSMUST00000220512 1995 ntBASIC1.32□□□□□ -2.2
Trub1Q8C0D0 AC162910.1-201ENSMUST00000221219 1723 ntBASIC1.32□□□□□ -2.2
Trub1Q8C0D0 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.31□□□□□ -2.2
Trub1Q8C0D0 Gm25421-201ENSMUST00000104218 164 ntBASIC1.31□□□□□ -2.2
Trub1Q8C0D0 Gm12393-201ENSMUST00000117084 848 ntBASIC1.31□□□□□ -2.2
Trub1Q8C0D0 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.31□□□□□ -2.2
Trub1Q8C0D0 Gm22315-201ENSMUST00000158010 143 ntBASIC1.31□□□□□ -2.2
Trub1Q8C0D0 Gm7953-201ENSMUST00000168278 469 ntBASIC1.31□□□□□ -2.2
Trub1Q8C0D0 Gm24333-201ENSMUST00000175101 84 ntBASIC1.31□□□□□ -2.2
Trub1Q8C0D0 Gm27878-201ENSMUST00000184000 106 ntBASIC1.31□□□□□ -2.2
Trub1Q8C0D0 Gm5116-201ENSMUST00000187732 463 ntBASIC1.31□□□□□ -2.2
Trub1Q8C0D0 Gm29627-201ENSMUST00000187984 463 ntBASIC1.31□□□□□ -2.2
Trub1Q8C0D0 Gm28299-201ENSMUST00000189908 339 ntBASIC1.31□□□□□ -2.2
Trub1Q8C0D0 Gm28466-201ENSMUST00000190678 659 ntBASIC1.31□□□□□ -2.2
Trub1Q8C0D0 Gm42805-201ENSMUST00000196158 276 ntBASIC1.31□□□□□ -2.2
Trub1Q8C0D0 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.31□□□□□ -2.2
Trub1Q8C0D0 Gm18160-201ENSMUST00000214279 827 ntBASIC1.31□□□□□ -2.2
Trub1Q8C0D0 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Trub1Q8C0D0 Gm10360-201ENSMUST00000097219 272 ntBASIC1.31□□□□□ -2.2
Trub1Q8C0D0 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Trub1Q8C0D0 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.3□□□□□ -2.2
Trub1Q8C0D0 Gm14013-201ENSMUST00000119006 270 ntBASIC1.3□□□□□ -2.2
Trub1Q8C0D0 Gm24784-201ENSMUST00000157640 62 ntBASIC1.3□□□□□ -2.2
Trub1Q8C0D0 Gm24076-201ENSMUST00000158179 94 ntBASIC1.3□□□□□ -2.2
Trub1Q8C0D0 Gm2966-201ENSMUST00000166052 481 ntBASIC1.3□□□□□ -2.2
Trub1Q8C0D0 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.3□□□□□ -2.2
Trub1Q8C0D0 Gm25361-201ENSMUST00000179358 76 ntBASIC1.3□□□□□ -2.2
Trub1Q8C0D0 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC1.3□□□□□ -2.2
Trub1Q8C0D0 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.3□□□□□ -2.2
Trub1Q8C0D0 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC1.3□□□□□ -2.2
Trub1Q8C0D0 Gm29216-201ENSMUST00000187117 492 ntBASIC1.3□□□□□ -2.2
Trub1Q8C0D0 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC1.3□□□□□ -2.2
Trub1Q8C0D0 Gm38213-201ENSMUST00000193203 173 ntBASIC1.3□□□□□ -2.2
Trub1Q8C0D0 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.3□□□□□ -2.2
Trub1Q8C0D0 Gm42925-201ENSMUST00000197359 285 ntBASIC1.3□□□□□ -2.2
Trub1Q8C0D0 Gm42807-201ENSMUST00000200141 329 ntBASIC1.3□□□□□ -2.2
Trub1Q8C0D0 Gm44408-201ENSMUST00000200205 66 ntBASIC1.3□□□□□ -2.2
Trub1Q8C0D0 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.3□□□□□ -2.2
Trub1Q8C0D0 Gm17911-201ENSMUST00000210806 877 ntBASIC1.3□□□□□ -2.2
Trub1Q8C0D0 AC156574.2-201ENSMUST00000228023 282 ntBASIC1.3□□□□□ -2.2
Trub1Q8C0D0 Mir29c-201ENSMUST00000083614 88 ntBASIC1.3□□□□□ -2.2
Trub1Q8C0D0 Gm24865-201ENSMUST00000103246 96 ntBASIC1.29□□□□□ -2.2
Trub1Q8C0D0 Gm23336-201ENSMUST00000117023 123 ntBASIC1.29□□□□□ -2.2
Trub1Q8C0D0 Gm14417-201ENSMUST00000120036 1074 ntBASIC1.29□□□□□ -2.2
Trub1Q8C0D0 Gm14215-201ENSMUST00000120578 221 ntBASIC1.29□□□□□ -2.2
Trub1Q8C0D0 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.29□□□□□ -2.2
Trub1Q8C0D0 Gm23068-201ENSMUST00000158239 293 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 127.2 ms