Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm28843-201ENSMUST00000189198 678 ntBASIC1.59□□□□□ -2.16
Usp47Q8BY87 Gm29546-201ENSMUST00000191171 678 ntBASIC1.59□□□□□ -2.16
Usp47Q8BY87 Gm37029-201ENSMUST00000195773 239 ntBASIC1.59□□□□□ -2.16
Usp47Q8BY87 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Usp47Q8BY87 Gm29809-201ENSMUST00000218423 493 ntBASIC1.59□□□□□ -2.16
Usp47Q8BY87 Gm46994-201ENSMUST00000221523 219 ntBASIC1.59□□□□□ -2.16
Usp47Q8BY87 Gm5955-201ENSMUST00000222712 219 ntBASIC1.59□□□□□ -2.16
Usp47Q8BY87 Gm23645-201ENSMUST00000083228 108 ntBASIC1.59□□□□□ -2.16
Usp47Q8BY87 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.59□□□□□ -2.16
Usp47Q8BY87 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.58□□□□□ -2.16
Usp47Q8BY87 Gm14868-201ENSMUST00000117840 216 ntBASIC1.58□□□□□ -2.16
Usp47Q8BY87 Gm15312-201ENSMUST00000118827 271 ntBASIC1.58□□□□□ -2.16
Usp47Q8BY87 Gm14366-201ENSMUST00000121970 730 ntBASIC1.58□□□□□ -2.16
Usp47Q8BY87 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Usp47Q8BY87 Gm18416-201ENSMUST00000175635 1003 ntBASIC1.58□□□□□ -2.16
Usp47Q8BY87 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC1.58□□□□□ -2.16
Usp47Q8BY87 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
Usp47Q8BY87 Gm26177-201ENSMUST00000178683 107 ntBASIC1.58□□□□□ -2.16
Usp47Q8BY87 Gm19891-201ENSMUST00000189771 303 ntBASIC1.58□□□□□ -2.16
Usp47Q8BY87 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.58□□□□□ -2.16
Usp47Q8BY87 Gm43026-201ENSMUST00000202972 325 ntBASIC1.58□□□□□ -2.16
Usp47Q8BY87 Gm44988-201ENSMUST00000203835 1161 ntBASIC1.58□□□□□ -2.16
Usp47Q8BY87 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC1.58□□□□□ -2.16
Usp47Q8BY87 Gm44666-201ENSMUST00000208544 391 ntBASIC1.58□□□□□ -2.16
Usp47Q8BY87 Gm45365-201ENSMUST00000209489 256 ntBASIC1.58□□□□□ -2.16
Usp47Q8BY87 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Usp47Q8BY87 AC122225.1-201ENSMUST00000215641 369 ntBASIC1.58□□□□□ -2.16
Usp47Q8BY87 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC1.58□□□□□ -2.16
Usp47Q8BY87 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.58□□□□□ -2.16
Usp47Q8BY87 AC167977.2-201ENSMUST00000225676 682 ntBASIC1.58□□□□□ -2.16
Usp47Q8BY87 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Usp47Q8BY87 Gm22443-201ENSMUST00000082890 107 ntBASIC1.58□□□□□ -2.16
Usp47Q8BY87 Mir22-201ENSMUST00000083595 95 ntBASIC1.58□□□□□ -2.16
Usp47Q8BY87 Gm23733-201ENSMUST00000083750 106 ntBASIC1.58□□□□□ -2.16
Usp47Q8BY87 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.58□□□□□ -2.16
Usp47Q8BY87 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.57□□□□□ -2.16
Usp47Q8BY87 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Usp47Q8BY87 Gm14774-201ENSMUST00000117857 536 ntBASIC1.57□□□□□ -2.16
Usp47Q8BY87 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.57□□□□□ -2.16
Usp47Q8BY87 Gm22765-201ENSMUST00000158371 128 ntBASIC1.57□□□□□ -2.16
Usp47Q8BY87 Gm22929-201ENSMUST00000175517 107 ntBASIC1.57□□□□□ -2.16
Usp47Q8BY87 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC1.57□□□□□ -2.16
Usp47Q8BY87 Gm44050-201ENSMUST00000204263 527 ntBASIC1.57□□□□□ -2.16
Usp47Q8BY87 Gm45101-201ENSMUST00000208327 232 ntBASIC1.57□□□□□ -2.16
Usp47Q8BY87 Gm44554-201ENSMUST00000208738 147 ntBASIC1.57□□□□□ -2.16
Usp47Q8BY87 Gm46136-201ENSMUST00000214730 565 ntBASIC1.57□□□□□ -2.16
Usp47Q8BY87 Gm19709-201ENSMUST00000215403 482 ntBASIC1.57□□□□□ -2.16
Usp47Q8BY87 Mir10b-201ENSMUST00000083566 68 ntBASIC1.57□□□□□ -2.16
Usp47Q8BY87 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Usp47Q8BY87 Gm22469-201ENSMUST00000104118 133 ntBASIC1.56□□□□□ -2.16
Usp47Q8BY87 Gm15215-201ENSMUST00000117773 489 ntBASIC1.56□□□□□ -2.16
Usp47Q8BY87 Gm11854-201ENSMUST00000117839 446 ntBASIC1.56□□□□□ -2.16
Usp47Q8BY87 Gm12016-201ENSMUST00000119079 681 ntBASIC1.56□□□□□ -2.16
Usp47Q8BY87 Gm13153-201ENSMUST00000120969 637 ntBASIC1.56□□□□□ -2.16
Usp47Q8BY87 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC1.56□□□□□ -2.16
Usp47Q8BY87 Mir7241-201ENSMUST00000184532 64 ntBASIC1.56□□□□□ -2.16
Usp47Q8BY87 Gm23370-202ENSMUST00000197008 129 ntBASIC1.56□□□□□ -2.16
Usp47Q8BY87 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC1.56□□□□□ -2.16
Usp47Q8BY87 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.56□□□□□ -2.16
Usp47Q8BY87 Gm18488-201ENSMUST00000215082 364 ntBASIC1.56□□□□□ -2.16
Usp47Q8BY87 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.56□□□□□ -2.16
Usp47Q8BY87 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.56□□□□□ -2.16
Usp47Q8BY87 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.56□□□□□ -2.16
Usp47Q8BY87 Gm25788-201ENSMUST00000082721 131 ntBASIC1.56□□□□□ -2.16
Usp47Q8BY87 Gm24610-201ENSMUST00000083270 109 ntBASIC1.56□□□□□ -2.16
Usp47Q8BY87 Gm22974-201ENSMUST00000083301 103 ntBASIC1.56□□□□□ -2.16
Usp47Q8BY87 Gm25257-201ENSMUST00000083907 110 ntBASIC1.56□□□□□ -2.16
Usp47Q8BY87 Gm43924-201ENSMUST00000204851 1736 ntBASIC1.56□□□□□ -2.16
Usp47Q8BY87 Gm25992-201ENSMUST00000102437 109 ntBASIC1.55□□□□□ -2.16
Usp47Q8BY87 Gm24836-201ENSMUST00000122609 108 ntBASIC1.55□□□□□ -2.16
Usp47Q8BY87 Gm26089-201ENSMUST00000157898 107 ntBASIC1.55□□□□□ -2.16
Usp47Q8BY87 Gm23032-201ENSMUST00000157995 107 ntBASIC1.55□□□□□ -2.16
Usp47Q8BY87 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Usp47Q8BY87 Gm24754-201ENSMUST00000177997 107 ntBASIC1.55□□□□□ -2.16
Usp47Q8BY87 Gm23648-201ENSMUST00000180301 107 ntBASIC1.55□□□□□ -2.16
Usp47Q8BY87 Gm28825-201ENSMUST00000186233 238 ntBASIC1.55□□□□□ -2.16
Usp47Q8BY87 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Usp47Q8BY87 Gm44182-201ENSMUST00000204052 115 ntBASIC1.55□□□□□ -2.16
Usp47Q8BY87 Gm23506-201ENSMUST00000083077 107 ntBASIC1.55□□□□□ -2.16
Usp47Q8BY87 Gm26493-201ENSMUST00000083155 136 ntBASIC1.55□□□□□ -2.16
Usp47Q8BY87 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.54□□□□□ -2.16
Usp47Q8BY87 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.54□□□□□ -2.16
Usp47Q8BY87 Gm25506-201ENSMUST00000104339 70 ntBASIC1.54□□□□□ -2.16
Usp47Q8BY87 Mdga2-203ENSMUST00000113942 423 ntBASIC1.54□□□□□ -2.16
Usp47Q8BY87 Gm12646-201ENSMUST00000119144 238 ntBASIC1.54□□□□□ -2.16
Usp47Q8BY87 Gm11352-201ENSMUST00000119264 517 ntBASIC1.54□□□□□ -2.16
Usp47Q8BY87 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.54□□□□□ -2.16
Usp47Q8BY87 Gm14049-201ENSMUST00000121009 636 ntBASIC1.54□□□□□ -2.16
Usp47Q8BY87 Gm26363-201ENSMUST00000158866 83 ntBASIC1.54□□□□□ -2.16
Usp47Q8BY87 Gm25873-201ENSMUST00000180317 107 ntBASIC1.54□□□□□ -2.16
Usp47Q8BY87 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.54□□□□□ -2.16
Usp47Q8BY87 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Usp47Q8BY87 Mir300-201ENSMUST00000083485 79 ntBASIC1.54□□□□□ -2.16
Usp47Q8BY87 Gm23741-201ENSMUST00000097237 171 ntBASIC1.54□□□□□ -2.16
Usp47Q8BY87 Gm23332-201ENSMUST00000157424 275 ntBASIC1.53□□□□□ -2.16
Usp47Q8BY87 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.53□□□□□ -2.16
Usp47Q8BY87 Gm24137-201ENSMUST00000180055 79 ntBASIC1.53□□□□□ -2.16
Usp47Q8BY87 Gm22391-201ENSMUST00000180356 79 ntBASIC1.53□□□□□ -2.16
Usp47Q8BY87 Mir6370-201ENSMUST00000183510 120 ntBASIC1.53□□□□□ -2.16
Usp47Q8BY87 Gm27722-201ENSMUST00000183908 76 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms