Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm14694-201ENSMUST00000121856 282 ntBASIC4.29□□□□□ -1.72
Usp40Q8BWR4 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC4.29□□□□□ -1.72
Usp40Q8BWR4 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Usp40Q8BWR4 Gm22766-201ENSMUST00000158372 99 ntBASIC4.29□□□□□ -1.72
Usp40Q8BWR4 Gm3370-201ENSMUST00000171785 500 ntBASIC4.29□□□□□ -1.72
Usp40Q8BWR4 Gm23921-201ENSMUST00000175258 107 ntBASIC4.29□□□□□ -1.72
Usp40Q8BWR4 Gm20651-201ENSMUST00000177219 329 ntBASIC4.29□□□□□ -1.72
Usp40Q8BWR4 Mir669k-201ENSMUST00000177742 127 ntBASIC4.29□□□□□ -1.72
Usp40Q8BWR4 Mir466b-1-201ENSMUST00000177988 82 ntBASIC4.29□□□□□ -1.72
Usp40Q8BWR4 Gm25673-201ENSMUST00000179957 127 ntBASIC4.29□□□□□ -1.72
Usp40Q8BWR4 Gm28282-201ENSMUST00000186072 186 ntBASIC4.29□□□□□ -1.72
Usp40Q8BWR4 Gm28849-201ENSMUST00000188127 174 ntBASIC4.29□□□□□ -1.72
Usp40Q8BWR4 Gm28330-201ENSMUST00000190353 171 ntBASIC4.29□□□□□ -1.72
Usp40Q8BWR4 Gm38076-201ENSMUST00000193889 450 ntBASIC4.29□□□□□ -1.72
Usp40Q8BWR4 Gm43250-201ENSMUST00000196536 273 ntBASIC4.29□□□□□ -1.72
Usp40Q8BWR4 Gm44343-201ENSMUST00000196702 90 ntBASIC4.29□□□□□ -1.72
Usp40Q8BWR4 Gm43402-201ENSMUST00000197159 159 ntBASIC4.29□□□□□ -1.72
Usp40Q8BWR4 Gm7726-201ENSMUST00000206241 231 ntBASIC4.29□□□□□ -1.72
Usp40Q8BWR4 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.29□□□□□ -1.72
Usp40Q8BWR4 Gm6842-201ENSMUST00000211361 390 ntBASIC4.29□□□□□ -1.72
Usp40Q8BWR4 AC126440.1-201ENSMUST00000227098 349 ntBASIC4.29□□□□□ -1.72
Usp40Q8BWR4 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Usp40Q8BWR4 Gm42547-201ENSMUST00000201159 3798 ntBASIC4.29□□□□□ -1.72
Usp40Q8BWR4 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Usp40Q8BWR4 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Usp40Q8BWR4 Gm22784-201ENSMUST00000104088 132 ntBASIC4.28□□□□□ -1.72
Usp40Q8BWR4 Gm25560-201ENSMUST00000104606 176 ntBASIC4.28□□□□□ -1.72
Usp40Q8BWR4 Gm11572-201ENSMUST00000119164 120 ntBASIC4.28□□□□□ -1.72
Usp40Q8BWR4 Gm23232-201ENSMUST00000157300 105 ntBASIC4.28□□□□□ -1.72
Usp40Q8BWR4 Gm17187-201ENSMUST00000164622 410 ntBASIC4.28□□□□□ -1.72
Usp40Q8BWR4 Gm28002-201ENSMUST00000184832 100 ntBASIC4.28□□□□□ -1.72
Usp40Q8BWR4 Gm1833-201ENSMUST00000191608 682 ntBASIC4.28□□□□□ -1.72
Usp40Q8BWR4 Gm37081-201ENSMUST00000192034 196 ntBASIC4.28□□□□□ -1.72
Usp40Q8BWR4 Gm43427-201ENSMUST00000198188 331 ntBASIC4.28□□□□□ -1.72
Usp40Q8BWR4 AC150901.1-201ENSMUST00000208407 145 ntBASIC4.28□□□□□ -1.72
Usp40Q8BWR4 AC124537.1-201ENSMUST00000222890 159 ntBASIC4.28□□□□□ -1.72
Usp40Q8BWR4 Mir181b-2-201ENSMUST00000083644 89 ntBASIC4.28□□□□□ -1.72
Usp40Q8BWR4 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Usp40Q8BWR4 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Usp40Q8BWR4 Gm43032-201ENSMUST00000197967 3123 ntBASIC4.28□□□□□ -1.72
Usp40Q8BWR4 Gm13457-201ENSMUST00000117885 267 ntBASIC4.27□□□□□ -1.73
Usp40Q8BWR4 Gm13557-201ENSMUST00000120771 382 ntBASIC4.27□□□□□ -1.73
Usp40Q8BWR4 Gm23557-201ENSMUST00000157820 138 ntBASIC4.27□□□□□ -1.73
Usp40Q8BWR4 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC4.27□□□□□ -1.73
Usp40Q8BWR4 Gm23571-201ENSMUST00000180073 127 ntBASIC4.27□□□□□ -1.73
Usp40Q8BWR4 Mir7081-201ENSMUST00000184490 75 ntBASIC4.27□□□□□ -1.73
Usp40Q8BWR4 Mir6916-201ENSMUST00000184514 63 ntBASIC4.27□□□□□ -1.73
Usp40Q8BWR4 Mir195b-201ENSMUST00000184814 97 ntBASIC4.27□□□□□ -1.73
Usp40Q8BWR4 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.27□□□□□ -1.73
Usp40Q8BWR4 Gm43583-201ENSMUST00000199235 303 ntBASIC4.27□□□□□ -1.73
Usp40Q8BWR4 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Usp40Q8BWR4 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Usp40Q8BWR4 AC151902.2-201ENSMUST00000226419 301 ntBASIC4.27□□□□□ -1.73
Usp40Q8BWR4 Gm44150-201ENSMUST00000203317 2619 ntBASIC4.27□□□□□ -1.73
Usp40Q8BWR4 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC4.27□□□□□ -1.73
Usp40Q8BWR4 Gm6325-201ENSMUST00000122015 3114 ntBASIC4.27□□□□□ -1.73
Usp40Q8BWR4 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Usp40Q8BWR4 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Usp40Q8BWR4 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Usp40Q8BWR4 Gm21034-201ENSMUST00000207390 2608 ntBASIC4.26□□□□□ -1.73
Usp40Q8BWR4 Gm21035-201ENSMUST00000207867 2608 ntBASIC4.26□□□□□ -1.73
Usp40Q8BWR4 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp40Q8BWR4 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp40Q8BWR4 AC154386.1-201ENSMUST00000222753 2871 ntBASIC4.26□□□□□ -1.73
Usp40Q8BWR4 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.26□□□□□ -1.73
Usp40Q8BWR4 Gm26500-201ENSMUST00000101867 106 ntBASIC4.26□□□□□ -1.73
Usp40Q8BWR4 Snord19-201ENSMUST00000104609 76 ntBASIC4.26□□□□□ -1.73
Usp40Q8BWR4 Gm23960-201ENSMUST00000157206 131 ntBASIC4.26□□□□□ -1.73
Usp40Q8BWR4 Gm24876-201ENSMUST00000158780 92 ntBASIC4.26□□□□□ -1.73
Usp40Q8BWR4 Gm25450-201ENSMUST00000179144 107 ntBASIC4.26□□□□□ -1.73
Usp40Q8BWR4 Gm29022-201ENSMUST00000190702 225 ntBASIC4.26□□□□□ -1.73
Usp40Q8BWR4 Gm9402-201ENSMUST00000196849 388 ntBASIC4.26□□□□□ -1.73
Usp40Q8BWR4 Gm44960-201ENSMUST00000207403 141 ntBASIC4.26□□□□□ -1.73
Usp40Q8BWR4 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC4.26□□□□□ -1.73
Usp40Q8BWR4 AC164297.3-201ENSMUST00000224238 94 ntBASIC4.26□□□□□ -1.73
Usp40Q8BWR4 Gm22249-201ENSMUST00000082485 136 ntBASIC4.26□□□□□ -1.73
Usp40Q8BWR4 Gm22685-201ENSMUST00000082848 106 ntBASIC4.26□□□□□ -1.73
Usp40Q8BWR4 n-R5s50-201ENSMUST00000083168 111 ntBASIC4.26□□□□□ -1.73
Usp40Q8BWR4 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp40Q8BWR4 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp40Q8BWR4 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Usp40Q8BWR4 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Usp40Q8BWR4 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Usp40Q8BWR4 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Usp40Q8BWR4 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Usp40Q8BWR4 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Usp40Q8BWR4 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Usp40Q8BWR4 Gm15029-201ENSMUST00000119742 199 ntBASIC4.25□□□□□ -1.73
Usp40Q8BWR4 Gm23887-201ENSMUST00000122683 172 ntBASIC4.25□□□□□ -1.73
Usp40Q8BWR4 Gm24131-201ENSMUST00000158539 107 ntBASIC4.25□□□□□ -1.73
Usp40Q8BWR4 Gm44470-201ENSMUST00000203913 142 ntBASIC4.25□□□□□ -1.73
Usp40Q8BWR4 Gm45101-201ENSMUST00000208327 232 ntBASIC4.25□□□□□ -1.73
Usp40Q8BWR4 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC4.25□□□□□ -1.73
Usp40Q8BWR4 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.25□□□□□ -1.73
Usp40Q8BWR4 AC133598.4-202ENSMUST00000225267 469 ntBASIC4.25□□□□□ -1.73
Usp40Q8BWR4 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
Usp40Q8BWR4 Gm25078-201ENSMUST00000082530 107 ntBASIC4.25□□□□□ -1.73
Usp40Q8BWR4 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
Usp40Q8BWR4 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Usp40Q8BWR4 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 163.4 ms