Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Ubfd1Q78JW9 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Ubfd1Q78JW9 Gm13504-201ENSMUST00000117490 316 ntBASIC3.03□□□□□ -1.92
Ubfd1Q78JW9 Gm15183-201ENSMUST00000118933 348 ntBASIC3.03□□□□□ -1.92
Ubfd1Q78JW9 Gm14837-201ENSMUST00000119688 206 ntBASIC3.03□□□□□ -1.92
Ubfd1Q78JW9 Gm15733-201ENSMUST00000132957 242 ntBASIC3.03□□□□□ -1.92
Ubfd1Q78JW9 Gm24716-201ENSMUST00000157524 104 ntBASIC3.03□□□□□ -1.92
Ubfd1Q78JW9 Gm22389-201ENSMUST00000158193 301 ntBASIC3.03□□□□□ -1.92
Ubfd1Q78JW9 Gm23262-201ENSMUST00000158323 168 ntBASIC3.03□□□□□ -1.92
Ubfd1Q78JW9 Gm22113-201ENSMUST00000158343 104 ntBASIC3.03□□□□□ -1.92
Ubfd1Q78JW9 Gm24005-201ENSMUST00000158459 296 ntBASIC3.03□□□□□ -1.92
Ubfd1Q78JW9 Gm24056-201ENSMUST00000158617 146 ntBASIC3.03□□□□□ -1.92
Ubfd1Q78JW9 Gm44476-201ENSMUST00000196225 91 ntBASIC3.03□□□□□ -1.92
Ubfd1Q78JW9 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC3.03□□□□□ -1.92
Ubfd1Q78JW9 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC3.03□□□□□ -1.92
Ubfd1Q78JW9 AC135292.1-201ENSMUST00000227665 204 ntBASIC3.03□□□□□ -1.92
Ubfd1Q78JW9 Gm23041-201ENSMUST00000083868 106 ntBASIC3.03□□□□□ -1.92
Ubfd1Q78JW9 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.03□□□□□ -1.92
Ubfd1Q78JW9 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Ubfd1Q78JW9 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
Ubfd1Q78JW9 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.03□□□□□ -1.93
Ubfd1Q78JW9 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ubfd1Q78JW9 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ubfd1Q78JW9 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ubfd1Q78JW9 Gm11598-201ENSMUST00000119257 357 ntBASIC3.02□□□□□ -1.93
Ubfd1Q78JW9 Gm23380-201ENSMUST00000158448 103 ntBASIC3.02□□□□□ -1.93
Ubfd1Q78JW9 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Ubfd1Q78JW9 Gm18520-201ENSMUST00000174783 658 ntBASIC3.02□□□□□ -1.93
Ubfd1Q78JW9 Gm24618-201ENSMUST00000177718 94 ntBASIC3.02□□□□□ -1.93
Ubfd1Q78JW9 Gm23953-201ENSMUST00000178214 94 ntBASIC3.02□□□□□ -1.93
Ubfd1Q78JW9 Gm26332-201ENSMUST00000179813 94 ntBASIC3.02□□□□□ -1.93
Ubfd1Q78JW9 Gm22863-201ENSMUST00000180265 94 ntBASIC3.02□□□□□ -1.93
Ubfd1Q78JW9 Gm29397-201ENSMUST00000185205 333 ntBASIC3.02□□□□□ -1.93
Ubfd1Q78JW9 Gm20058-201ENSMUST00000186939 284 ntBASIC3.02□□□□□ -1.93
Ubfd1Q78JW9 Gm37616-201ENSMUST00000193974 322 ntBASIC3.02□□□□□ -1.93
Ubfd1Q78JW9 Gm43510-201ENSMUST00000197922 353 ntBASIC3.02□□□□□ -1.93
Ubfd1Q78JW9 Gm32222-201ENSMUST00000203296 298 ntBASIC3.02□□□□□ -1.93
Ubfd1Q78JW9 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ubfd1Q78JW9 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ubfd1Q78JW9 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ubfd1Q78JW9 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Ubfd1Q78JW9 Gm22658-201ENSMUST00000104196 155 ntBASIC3.01□□□□□ -1.93
Ubfd1Q78JW9 Gm12924-201ENSMUST00000121747 318 ntBASIC3.01□□□□□ -1.93
Ubfd1Q78JW9 Gm23183-201ENSMUST00000122595 323 ntBASIC3.01□□□□□ -1.93
Ubfd1Q78JW9 Gm22026-201ENSMUST00000122735 281 ntBASIC3.01□□□□□ -1.93
Ubfd1Q78JW9 Gm24914-201ENSMUST00000157285 313 ntBASIC3.01□□□□□ -1.93
Ubfd1Q78JW9 Gm17117-201ENSMUST00000163665 299 ntBASIC3.01□□□□□ -1.93
Ubfd1Q78JW9 Gm20651-201ENSMUST00000177219 329 ntBASIC3.01□□□□□ -1.93
Ubfd1Q78JW9 Gm23933-201ENSMUST00000178405 79 ntBASIC3.01□□□□□ -1.93
Ubfd1Q78JW9 Mir7667-201ENSMUST00000183866 63 ntBASIC3.01□□□□□ -1.93
Ubfd1Q78JW9 Gm27332-201ENSMUST00000184893 112 ntBASIC3.01□□□□□ -1.93
Ubfd1Q78JW9 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.01□□□□□ -1.93
Ubfd1Q78JW9 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC3.01□□□□□ -1.93
Ubfd1Q78JW9 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Ubfd1Q78JW9 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3□□□□□ -1.93
Ubfd1Q78JW9 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC3□□□□□ -1.93
Ubfd1Q78JW9 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
Ubfd1Q78JW9 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Ubfd1Q78JW9 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC3□□□□□ -1.93
Ubfd1Q78JW9 Gm44846-201ENSMUST00000207127 3243 ntBASIC3□□□□□ -1.93
Ubfd1Q78JW9 Gm25376-201ENSMUST00000104340 133 ntBASIC3□□□□□ -1.93
Ubfd1Q78JW9 Gm12723-201ENSMUST00000120700 451 ntBASIC3□□□□□ -1.93
Ubfd1Q78JW9 Gm27698-201ENSMUST00000184060 249 ntBASIC3□□□□□ -1.93
Ubfd1Q78JW9 Gm27582-201ENSMUST00000184084 126 ntBASIC3□□□□□ -1.93
Ubfd1Q78JW9 Gm37428-201ENSMUST00000193886 137 ntBASIC3□□□□□ -1.93
Ubfd1Q78JW9 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3□□□□□ -1.93
Ubfd1Q78JW9 Gm42739-201ENSMUST00000200687 226 ntBASIC3□□□□□ -1.93
Ubfd1Q78JW9 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Ubfd1Q78JW9 AC159188.1-201ENSMUST00000225198 526 ntBASIC3□□□□□ -1.93
Ubfd1Q78JW9 Gm23406-201ENSMUST00000082537 122 ntBASIC3□□□□□ -1.93
Ubfd1Q78JW9 Gm45130-201ENSMUST00000207574 3388 ntBASIC3□□□□□ -1.93
Ubfd1Q78JW9 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Ubfd1Q78JW9 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
Ubfd1Q78JW9 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Ubfd1Q78JW9 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Ubfd1Q78JW9 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Ubfd1Q78JW9 Gm14821-201ENSMUST00000121975 435 ntBASIC2.99□□□□□ -1.93
Ubfd1Q78JW9 Gm23579-201ENSMUST00000158528 103 ntBASIC2.99□□□□□ -1.93
Ubfd1Q78JW9 Mir7k-201ENSMUST00000184115 110 ntBASIC2.99□□□□□ -1.93
Ubfd1Q78JW9 Gm28288-201ENSMUST00000191019 214 ntBASIC2.99□□□□□ -1.93
Ubfd1Q78JW9 Gm43901-201ENSMUST00000203247 453 ntBASIC2.99□□□□□ -1.93
Ubfd1Q78JW9 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC2.99□□□□□ -1.93
Ubfd1Q78JW9 Gm40810-201ENSMUST00000219149 253 ntBASIC2.99□□□□□ -1.93
Ubfd1Q78JW9 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.99□□□□□ -1.93
Ubfd1Q78JW9 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.99□□□□□ -1.93
Ubfd1Q78JW9 Gm25896-201ENSMUST00000083713 136 ntBASIC2.99□□□□□ -1.93
Ubfd1Q78JW9 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
Ubfd1Q78JW9 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.99□□□□□ -1.93
Ubfd1Q78JW9 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Ubfd1Q78JW9 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Ubfd1Q78JW9 Gm44715-201ENSMUST00000209049 3839 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm11935-201ENSMUST00000118608 399 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm22322-201ENSMUST00000157151 111 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm24908-201ENSMUST00000157294 127 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm23716-201ENSMUST00000157348 144 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm23668-201ENSMUST00000157465 111 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm22839-201ENSMUST00000158436 304 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 147.1 ms