Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 AC158803.1-201ENSMUST00000219495 316 ntBASIC0.91□□□□□ -2.26
Topbp1Q6ZQF0 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC0.91□□□□□ -2.26
Topbp1Q6ZQF0 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
Topbp1Q6ZQF0 Gm23975-201ENSMUST00000082685 106 ntBASIC0.91□□□□□ -2.26
Topbp1Q6ZQF0 Gm23907-201ENSMUST00000104595 189 ntBASIC0.9□□□□□ -2.26
Topbp1Q6ZQF0 Mir208b-201ENSMUST00000104735 77 ntBASIC0.9□□□□□ -2.26
Topbp1Q6ZQF0 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.9□□□□□ -2.26
Topbp1Q6ZQF0 Gm15312-201ENSMUST00000118827 271 ntBASIC0.9□□□□□ -2.26
Topbp1Q6ZQF0 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC0.9□□□□□ -2.26
Topbp1Q6ZQF0 Gm6956-201ENSMUST00000134724 546 ntBASIC0.9□□□□□ -2.26
Topbp1Q6ZQF0 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
Topbp1Q6ZQF0 Snord87-201ENSMUST00000175437 87 ntBASIC0.9□□□□□ -2.26
Topbp1Q6ZQF0 Gm21754-201ENSMUST00000177550 479 ntBASIC0.9□□□□□ -2.26
Topbp1Q6ZQF0 Gm381-201ENSMUST00000117443 2037 ntBASIC0.89□□□□□ -2.27
Topbp1Q6ZQF0 Gm12639-201ENSMUST00000121400 493 ntBASIC0.89□□□□□ -2.27
Topbp1Q6ZQF0 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC0.89□□□□□ -2.27
Topbp1Q6ZQF0 Gm23124-201ENSMUST00000157650 107 ntBASIC0.89□□□□□ -2.27
Topbp1Q6ZQF0 Gm22382-201ENSMUST00000158185 130 ntBASIC0.89□□□□□ -2.27
Topbp1Q6ZQF0 Snord11-201ENSMUST00000158468 84 ntBASIC0.89□□□□□ -2.27
Topbp1Q6ZQF0 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
Topbp1Q6ZQF0 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC0.89□□□□□ -2.27
Topbp1Q6ZQF0 Gm18747-201ENSMUST00000198129 648 ntBASIC0.89□□□□□ -2.27
Topbp1Q6ZQF0 Gm43199-201ENSMUST00000200019 307 ntBASIC0.89□□□□□ -2.27
Topbp1Q6ZQF0 Gm44041-201ENSMUST00000203678 396 ntBASIC0.89□□□□□ -2.27
Topbp1Q6ZQF0 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC0.89□□□□□ -2.27
Topbp1Q6ZQF0 AC154257.2-201ENSMUST00000224166 340 ntBASIC0.89□□□□□ -2.27
Topbp1Q6ZQF0 AC158388.1-201ENSMUST00000225441 256 ntBASIC0.89□□□□□ -2.27
Topbp1Q6ZQF0 Mir101a-201ENSMUST00000083517 83 ntBASIC0.89□□□□□ -2.27
Topbp1Q6ZQF0 Gm11784-201ENSMUST00000118568 474 ntBASIC0.89□□□□□ -2.27
Topbp1Q6ZQF0 Gm25621-201ENSMUST00000157223 114 ntBASIC0.89□□□□□ -2.27
Topbp1Q6ZQF0 Gm22088-201ENSMUST00000158341 117 ntBASIC0.89□□□□□ -2.27
Topbp1Q6ZQF0 Gm24768-201ENSMUST00000158512 94 ntBASIC0.89□□□□□ -2.27
Topbp1Q6ZQF0 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
Topbp1Q6ZQF0 Mir3112-201ENSMUST00000175431 82 ntBASIC0.89□□□□□ -2.27
Topbp1Q6ZQF0 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC0.89□□□□□ -2.27
Topbp1Q6ZQF0 Gm27980-201ENSMUST00000184094 169 ntBASIC0.89□□□□□ -2.27
Topbp1Q6ZQF0 AC167140.1-201ENSMUST00000224710 403 ntBASIC0.89□□□□□ -2.27
Topbp1Q6ZQF0 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC0.89□□□□□ -2.27
Topbp1Q6ZQF0 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Topbp1Q6ZQF0 Gm15088-201ENSMUST00000117973 1508 ntBASIC0.88□□□□□ -2.27
Topbp1Q6ZQF0 Gm15098-201ENSMUST00000119036 1508 ntBASIC0.88□□□□□ -2.27
Topbp1Q6ZQF0 AC122887.2-201ENSMUST00000219465 1603 ntBASIC0.88□□□□□ -2.27
Topbp1Q6ZQF0 Gm24431-201ENSMUST00000104073 66 ntBASIC0.88□□□□□ -2.27
Topbp1Q6ZQF0 Mir1197-201ENSMUST00000117037 120 ntBASIC0.88□□□□□ -2.27
Topbp1Q6ZQF0 Gm15381-201ENSMUST00000121501 1156 ntBASIC0.88□□□□□ -2.27
Topbp1Q6ZQF0 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC0.88□□□□□ -2.27
Topbp1Q6ZQF0 Gm7953-201ENSMUST00000168278 469 ntBASIC0.88□□□□□ -2.27
Topbp1Q6ZQF0 AC160031.2-201ENSMUST00000218242 274 ntBASIC0.88□□□□□ -2.27
Topbp1Q6ZQF0 Gm24208-201ENSMUST00000082783 135 ntBASIC0.88□□□□□ -2.27
Topbp1Q6ZQF0 Snord118-201ENSMUST00000082965 135 ntBASIC0.88□□□□□ -2.27
Topbp1Q6ZQF0 Gm7648-201ENSMUST00000173036 1658 ntBASIC0.87□□□□□ -2.27
Topbp1Q6ZQF0 Gm6664-201ENSMUST00000119138 468 ntBASIC0.87□□□□□ -2.27
Topbp1Q6ZQF0 Gm22527-201ENSMUST00000158816 106 ntBASIC0.87□□□□□ -2.27
Topbp1Q6ZQF0 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
Topbp1Q6ZQF0 Gm43944-201ENSMUST00000205220 120 ntBASIC0.87□□□□□ -2.27
Topbp1Q6ZQF0 Gm44857-201ENSMUST00000208331 196 ntBASIC0.87□□□□□ -2.27
Topbp1Q6ZQF0 Gm19140-201ENSMUST00000209790 421 ntBASIC0.87□□□□□ -2.27
Topbp1Q6ZQF0 AC073947.3-201ENSMUST00000215576 766 ntBASIC0.87□□□□□ -2.27
Topbp1Q6ZQF0 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
Topbp1Q6ZQF0 Gm23531-201ENSMUST00000104567 68 ntBASIC0.86□□□□□ -2.27
Topbp1Q6ZQF0 Gm24837-201ENSMUST00000158683 81 ntBASIC0.86□□□□□ -2.27
Topbp1Q6ZQF0 Gm7871-201ENSMUST00000195346 618 ntBASIC0.86□□□□□ -2.27
Topbp1Q6ZQF0 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC0.86□□□□□ -2.27
Topbp1Q6ZQF0 CT025538.2-201ENSMUST00000226083 772 ntBASIC0.86□□□□□ -2.27
Topbp1Q6ZQF0 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.86□□□□□ -2.27
Topbp1Q6ZQF0 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC0.86□□□□□ -2.27
Topbp1Q6ZQF0 Gm12392-201ENSMUST00000118014 938 ntBASIC0.85□□□□□ -2.27
Topbp1Q6ZQF0 Gm14039-201ENSMUST00000118705 101 ntBASIC0.85□□□□□ -2.27
Topbp1Q6ZQF0 Mir1264-201ENSMUST00000175381 86 ntBASIC0.85□□□□□ -2.27
Topbp1Q6ZQF0 Gm27522-201ENSMUST00000183949 230 ntBASIC0.85□□□□□ -2.27
Topbp1Q6ZQF0 Gm45614-201ENSMUST00000209994 721 ntBASIC0.85□□□□□ -2.27
Topbp1Q6ZQF0 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC0.84□□□□□ -2.27
Topbp1Q6ZQF0 Gm14360-201ENSMUST00000120670 393 ntBASIC0.84□□□□□ -2.27
Topbp1Q6ZQF0 Gm23463-201ENSMUST00000122468 99 ntBASIC0.84□□□□□ -2.27
Topbp1Q6ZQF0 Gm23339-201ENSMUST00000158962 139 ntBASIC0.84□□□□□ -2.27
Topbp1Q6ZQF0 Gm27974-201ENSMUST00000183415 105 ntBASIC0.84□□□□□ -2.27
Topbp1Q6ZQF0 Gm28755-201ENSMUST00000185773 199 ntBASIC0.84□□□□□ -2.27
Topbp1Q6ZQF0 Gm9541-201ENSMUST00000188409 502 ntBASIC0.84□□□□□ -2.27
Topbp1Q6ZQF0 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
Topbp1Q6ZQF0 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
Topbp1Q6ZQF0 Gm15223-201ENSMUST00000120989 826 ntBASIC0.84□□□□□ -2.28
Topbp1Q6ZQF0 Gm24056-201ENSMUST00000158617 146 ntBASIC0.84□□□□□ -2.28
Topbp1Q6ZQF0 Gm22252-201ENSMUST00000179316 79 ntBASIC0.84□□□□□ -2.28
Topbp1Q6ZQF0 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC0.84□□□□□ -2.28
Topbp1Q6ZQF0 Gm29231-201ENSMUST00000179850 319 ntBASIC0.84□□□□□ -2.28
Topbp1Q6ZQF0 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.84□□□□□ -2.28
Topbp1Q6ZQF0 Gm38274-201ENSMUST00000195689 148 ntBASIC0.84□□□□□ -2.28
Topbp1Q6ZQF0 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC0.84□□□□□ -2.28
Topbp1Q6ZQF0 Snord32a-201ENSMUST00000083285 83 ntBASIC0.84□□□□□ -2.28
Topbp1Q6ZQF0 Gm23040-201ENSMUST00000083869 163 ntBASIC0.84□□□□□ -2.28
Topbp1Q6ZQF0 Gm44562-201ENSMUST00000207194 1347 ntBASIC0.83□□□□□ -2.28
Topbp1Q6ZQF0 Gm23431-201ENSMUST00000104006 107 ntBASIC0.83□□□□□ -2.28
Topbp1Q6ZQF0 Mdga2-203ENSMUST00000113942 423 ntBASIC0.83□□□□□ -2.28
Topbp1Q6ZQF0 Gm12636-201ENSMUST00000117395 624 ntBASIC0.83□□□□□ -2.28
Topbp1Q6ZQF0 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC0.83□□□□□ -2.28
Topbp1Q6ZQF0 Gm16354-201ENSMUST00000155376 150 ntBASIC0.83□□□□□ -2.28
Topbp1Q6ZQF0 Gm26378-201ENSMUST00000179093 107 ntBASIC0.83□□□□□ -2.28
Topbp1Q6ZQF0 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Topbp1Q6ZQF0 Mir7683-201ENSMUST00000183842 61 ntBASIC0.83□□□□□ -2.28
Topbp1Q6ZQF0 Gm29397-201ENSMUST00000185205 333 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms