Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm44030-201ENSMUST00000204865 432 ntBASIC3.6□□□□□ -1.83
Scaf4Q6PFF0 Gm45013-201ENSMUST00000206883 178 ntBASIC3.6□□□□□ -1.83
Scaf4Q6PFF0 AC154241.1-201ENSMUST00000223952 356 ntBASIC3.6□□□□□ -1.83
Scaf4Q6PFF0 Mir146-201ENSMUST00000083667 65 ntBASIC3.6□□□□□ -1.83
Scaf4Q6PFF0 Gm37941-201ENSMUST00000192170 2309 ntBASIC3.6□□□□□ -1.83
Scaf4Q6PFF0 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.6□□□□□ -1.83
Scaf4Q6PFF0 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Scaf4Q6PFF0 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Scaf4Q6PFF0 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Scaf4Q6PFF0 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.59□□□□□ -1.83
Scaf4Q6PFF0 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Scaf4Q6PFF0 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
Scaf4Q6PFF0 Snord66-201ENSMUST00000104051 75 ntBASIC3.59□□□□□ -1.83
Scaf4Q6PFF0 Gm22107-201ENSMUST00000122548 100 ntBASIC3.59□□□□□ -1.83
Scaf4Q6PFF0 Gm26275-201ENSMUST00000157101 268 ntBASIC3.59□□□□□ -1.83
Scaf4Q6PFF0 Gm24244-201ENSMUST00000157317 130 ntBASIC3.59□□□□□ -1.83
Scaf4Q6PFF0 Gm26148-201ENSMUST00000157430 68 ntBASIC3.59□□□□□ -1.83
Scaf4Q6PFF0 Gm23554-201ENSMUST00000157818 110 ntBASIC3.59□□□□□ -1.83
Scaf4Q6PFF0 Gm22531-201ENSMUST00000158819 140 ntBASIC3.59□□□□□ -1.83
Scaf4Q6PFF0 Mir5127-201ENSMUST00000175295 71 ntBASIC3.59□□□□□ -1.83
Scaf4Q6PFF0 Mir5134-201ENSMUST00000175529 78 ntBASIC3.59□□□□□ -1.83
Scaf4Q6PFF0 Gm28755-201ENSMUST00000185773 199 ntBASIC3.59□□□□□ -1.83
Scaf4Q6PFF0 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.59□□□□□ -1.83
Scaf4Q6PFF0 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.59□□□□□ -1.83
Scaf4Q6PFF0 Gm18991-201ENSMUST00000209225 746 ntBASIC3.59□□□□□ -1.83
Scaf4Q6PFF0 Gm45553-201ENSMUST00000209929 507 ntBASIC3.59□□□□□ -1.83
Scaf4Q6PFF0 Gm8942-201ENSMUST00000217892 400 ntBASIC3.59□□□□□ -1.83
Scaf4Q6PFF0 Gm19786-201ENSMUST00000222589 580 ntBASIC3.59□□□□□ -1.83
Scaf4Q6PFF0 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Scaf4Q6PFF0 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Scaf4Q6PFF0 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
Scaf4Q6PFF0 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Scaf4Q6PFF0 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Scaf4Q6PFF0 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.58□□□□□ -1.84
Scaf4Q6PFF0 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.58□□□□□ -1.84
Scaf4Q6PFF0 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Scaf4Q6PFF0 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.58□□□□□ -1.84
Scaf4Q6PFF0 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Scaf4Q6PFF0 Gm23532-201ENSMUST00000104569 112 ntBASIC3.58□□□□□ -1.84
Scaf4Q6PFF0 Gm5396-201ENSMUST00000121222 532 ntBASIC3.58□□□□□ -1.84
Scaf4Q6PFF0 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.58□□□□□ -1.84
Scaf4Q6PFF0 Gm24061-201ENSMUST00000157489 120 ntBASIC3.58□□□□□ -1.84
Scaf4Q6PFF0 Gm22537-201ENSMUST00000158172 199 ntBASIC3.58□□□□□ -1.84
Scaf4Q6PFF0 Gm5967-201ENSMUST00000172723 494 ntBASIC3.58□□□□□ -1.84
Scaf4Q6PFF0 Mir6960-201ENSMUST00000183449 61 ntBASIC3.58□□□□□ -1.84
Scaf4Q6PFF0 Gm27761-201ENSMUST00000184091 131 ntBASIC3.58□□□□□ -1.84
Scaf4Q6PFF0 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.58□□□□□ -1.84
Scaf4Q6PFF0 Mir721-201ENSMUST00000200230 88 ntBASIC3.58□□□□□ -1.84
Scaf4Q6PFF0 Gm5175-202ENSMUST00000219699 529 ntBASIC3.58□□□□□ -1.84
Scaf4Q6PFF0 AC124739.2-201ENSMUST00000222201 109 ntBASIC3.58□□□□□ -1.84
Scaf4Q6PFF0 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.58□□□□□ -1.84
Scaf4Q6PFF0 Gm26495-201ENSMUST00000083152 137 ntBASIC3.58□□□□□ -1.84
Scaf4Q6PFF0 Mir384-201ENSMUST00000083565 88 ntBASIC3.58□□□□□ -1.84
Scaf4Q6PFF0 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Scaf4Q6PFF0 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Scaf4Q6PFF0 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.58□□□□□ -1.84
Scaf4Q6PFF0 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Scaf4Q6PFF0 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Scaf4Q6PFF0 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.58□□□□□ -1.84
Scaf4Q6PFF0 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Scaf4Q6PFF0 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 Gm12858-201ENSMUST00000121913 208 ntBASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 Gm24015-201ENSMUST00000157725 232 ntBASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 Gm25438-201ENSMUST00000158281 110 ntBASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 Gm24304-201ENSMUST00000177635 107 ntBASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 Gm37001-201ENSMUST00000193377 190 ntBASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 Gm37361-201ENSMUST00000194345 132 ntBASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 Gm37693-201ENSMUST00000194562 234 ntBASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 Gm44337-201ENSMUST00000196553 114 ntBASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 Gm18462-201ENSMUST00000208112 417 ntBASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 AC100209.2-201ENSMUST00000224461 451 ntBASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 AC168880.2-201ENSMUST00000224488 201 ntBASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 Gm22247-201ENSMUST00000082476 131 ntBASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 Snord22-201ENSMUST00000083153 126 ntBASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 Gm23039-201ENSMUST00000083870 161 ntBASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Scaf4Q6PFF0 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Scaf4Q6PFF0 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Scaf4Q6PFF0 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Scaf4Q6PFF0 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Scaf4Q6PFF0 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.56□□□□□ -1.84
Scaf4Q6PFF0 Gm25985-201ENSMUST00000122677 107 ntBASIC3.56□□□□□ -1.84
Scaf4Q6PFF0 Gm25805-201ENSMUST00000122788 108 ntBASIC3.56□□□□□ -1.84
Scaf4Q6PFF0 Gm23234-201ENSMUST00000157304 134 ntBASIC3.56□□□□□ -1.84
Scaf4Q6PFF0 Gm7582-201ENSMUST00000160831 603 ntBASIC3.56□□□□□ -1.84
Scaf4Q6PFF0 Mir6933-201ENSMUST00000184982 81 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms