Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.23□□□□□ -1.89
Rnf220Q6PDX6 Mir6414-201ENSMUST00000183685 82 ntBASIC3.23□□□□□ -1.89
Rnf220Q6PDX6 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.23□□□□□ -1.89
Rnf220Q6PDX6 Igkv15-102-201ENSMUST00000197885 287 ntBASIC3.23□□□□□ -1.89
Rnf220Q6PDX6 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.23□□□□□ -1.89
Rnf220Q6PDX6 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Rnf220Q6PDX6 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Rnf220Q6PDX6 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Rnf220Q6PDX6 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Gm15526-201ENSMUST00000112504 204 ntBASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Gm15846-201ENSMUST00000116022 320 ntBASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Gm15010-201ENSMUST00000117153 407 ntBASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Gm13167-201ENSMUST00000118554 578 ntBASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Gm11794-201ENSMUST00000119446 237 ntBASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Gm24909-201ENSMUST00000157290 280 ntBASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Gm25184-201ENSMUST00000157753 163 ntBASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Gm25643-201ENSMUST00000158874 103 ntBASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Gm22192-201ENSMUST00000175128 85 ntBASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Gm22120-201ENSMUST00000175590 70 ntBASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Mir5121-201ENSMUST00000198528 74 ntBASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Gm22571-201ENSMUST00000082984 70 ntBASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Gm25632-201ENSMUST00000083112 85 ntBASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Gm22739-201ENSMUST00000083437 160 ntBASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Rnf220Q6PDX6 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.89
Rnf220Q6PDX6 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Rnf220Q6PDX6 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Rnf220Q6PDX6 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC3.21□□□□□ -1.9
Rnf220Q6PDX6 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC3.21□□□□□ -1.9
Rnf220Q6PDX6 Gm22269-201ENSMUST00000104002 130 ntBASIC3.21□□□□□ -1.9
Rnf220Q6PDX6 Gm23271-201ENSMUST00000104052 124 ntBASIC3.21□□□□□ -1.9
Rnf220Q6PDX6 Mdga2-203ENSMUST00000113942 423 ntBASIC3.21□□□□□ -1.9
Rnf220Q6PDX6 Gm14792-201ENSMUST00000119725 258 ntBASIC3.21□□□□□ -1.9
Rnf220Q6PDX6 Gm12884-201ENSMUST00000120371 325 ntBASIC3.21□□□□□ -1.9
Rnf220Q6PDX6 Gm19898-201ENSMUST00000177490 251 ntBASIC3.21□□□□□ -1.9
Rnf220Q6PDX6 Gm26200-201ENSMUST00000180273 79 ntBASIC3.21□□□□□ -1.9
Rnf220Q6PDX6 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC3.21□□□□□ -1.9
Rnf220Q6PDX6 Gm28744-201ENSMUST00000189939 340 ntBASIC3.21□□□□□ -1.9
Rnf220Q6PDX6 Gm18433-202ENSMUST00000195682 196 ntBASIC3.21□□□□□ -1.9
Rnf220Q6PDX6 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.21□□□□□ -1.9
Rnf220Q6PDX6 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC3.21□□□□□ -1.9
Rnf220Q6PDX6 Gm3829-201ENSMUST00000222362 619 ntBASIC3.21□□□□□ -1.9
Rnf220Q6PDX6 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Rnf220Q6PDX6 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.21□□□□□ -1.9
Rnf220Q6PDX6 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.21□□□□□ -1.9
Rnf220Q6PDX6 Gm37061-201ENSMUST00000195066 3243 ntBASIC3.21□□□□□ -1.9
Rnf220Q6PDX6 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Rnf220Q6PDX6 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Mir466b-8-201ENSMUST00000103883 86 ntBASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Gm24126-201ENSMUST00000104111 106 ntBASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Gm15002-201ENSMUST00000118406 452 ntBASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Gm22277-201ENSMUST00000157204 277 ntBASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Gm23588-201ENSMUST00000157659 99 ntBASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Gm23589-201ENSMUST00000157660 105 ntBASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Gm24961-201ENSMUST00000157918 184 ntBASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Gm22531-201ENSMUST00000158819 140 ntBASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Gm25999-201ENSMUST00000175398 133 ntBASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Gm23047-201ENSMUST00000177661 94 ntBASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Gm8296-201ENSMUST00000185597 524 ntBASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Gm29104-201ENSMUST00000186304 222 ntBASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Gm37698-201ENSMUST00000192605 463 ntBASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Mir466e-201ENSMUST00000198862 84 ntBASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Mir466c-1-201ENSMUST00000200654 84 ntBASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.2□□□□□ -1.9
Rnf220Q6PDX6 Gm14782-201ENSMUST00000120151 195 ntBASIC3.19□□□□□ -1.9
Rnf220Q6PDX6 Gm5396-201ENSMUST00000121222 532 ntBASIC3.19□□□□□ -1.9
Rnf220Q6PDX6 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.19□□□□□ -1.9
Rnf220Q6PDX6 Gm16533-201ENSMUST00000140035 228 ntBASIC3.19□□□□□ -1.9
Rnf220Q6PDX6 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.19□□□□□ -1.9
Rnf220Q6PDX6 Gm20399-201ENSMUST00000174652 132 ntBASIC3.19□□□□□ -1.9
Rnf220Q6PDX6 Gm20660-201ENSMUST00000177515 289 ntBASIC3.19□□□□□ -1.9
Rnf220Q6PDX6 Gm10292-201ENSMUST00000183142 581 ntBASIC3.19□□□□□ -1.9
Rnf220Q6PDX6 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 116 ms