Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.66□□□□□ -1.82
Cpsf6Q6NVF9 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Cpsf6Q6NVF9 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Cpsf6Q6NVF9 Gm14282-201ENSMUST00000119484 240 ntBASIC3.66□□□□□ -1.82
Cpsf6Q6NVF9 n-R5s150-201ENSMUST00000122705 108 ntBASIC3.66□□□□□ -1.82
Cpsf6Q6NVF9 Gm22726-201ENSMUST00000158089 179 ntBASIC3.66□□□□□ -1.82
Cpsf6Q6NVF9 Gm25436-201ENSMUST00000158275 145 ntBASIC3.66□□□□□ -1.82
Cpsf6Q6NVF9 Gm23702-201ENSMUST00000158840 130 ntBASIC3.66□□□□□ -1.82
Cpsf6Q6NVF9 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.66□□□□□ -1.82
Cpsf6Q6NVF9 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.66□□□□□ -1.82
Cpsf6Q6NVF9 Gm28267-201ENSMUST00000191093 265 ntBASIC3.66□□□□□ -1.82
Cpsf6Q6NVF9 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Cpsf6Q6NVF9 Gm43155-201ENSMUST00000202661 494 ntBASIC3.66□□□□□ -1.82
Cpsf6Q6NVF9 AC132615.1-201ENSMUST00000213873 255 ntBASIC3.66□□□□□ -1.82
Cpsf6Q6NVF9 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.66□□□□□ -1.82
Cpsf6Q6NVF9 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Cpsf6Q6NVF9 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Cpsf6Q6NVF9 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Cpsf6Q6NVF9 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Cpsf6Q6NVF9 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.65□□□□□ -1.82
Cpsf6Q6NVF9 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.65□□□□□ -1.83
Cpsf6Q6NVF9 Mir193b-201ENSMUST00000103784 79 ntBASIC3.65□□□□□ -1.83
Cpsf6Q6NVF9 Gm22269-201ENSMUST00000104002 130 ntBASIC3.65□□□□□ -1.83
Cpsf6Q6NVF9 Mir1298-201ENSMUST00000116681 98 ntBASIC3.65□□□□□ -1.83
Cpsf6Q6NVF9 Gm14215-201ENSMUST00000120578 221 ntBASIC3.65□□□□□ -1.83
Cpsf6Q6NVF9 Gm12926-201ENSMUST00000121158 409 ntBASIC3.65□□□□□ -1.83
Cpsf6Q6NVF9 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.65□□□□□ -1.83
Cpsf6Q6NVF9 Gm25391-201ENSMUST00000157342 134 ntBASIC3.65□□□□□ -1.83
Cpsf6Q6NVF9 Gm25605-201ENSMUST00000158364 124 ntBASIC3.65□□□□□ -1.83
Cpsf6Q6NVF9 Gm22889-201ENSMUST00000158639 58 ntBASIC3.65□□□□□ -1.83
Cpsf6Q6NVF9 Gm17067-202ENSMUST00000180131 123 ntBASIC3.65□□□□□ -1.83
Cpsf6Q6NVF9 Gm27733-201ENSMUST00000184803 68 ntBASIC3.65□□□□□ -1.83
Cpsf6Q6NVF9 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.65□□□□□ -1.83
Cpsf6Q6NVF9 Trbv6-201ENSMUST00000193743 276 ntBASIC3.65□□□□□ -1.83
Cpsf6Q6NVF9 Gm44099-201ENSMUST00000203299 112 ntBASIC3.65□□□□□ -1.83
Cpsf6Q6NVF9 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.65□□□□□ -1.83
Cpsf6Q6NVF9 Gm8508-201ENSMUST00000061226 363 ntBASIC3.65□□□□□ -1.83
Cpsf6Q6NVF9 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Cpsf6Q6NVF9 Gm25147-201ENSMUST00000083030 105 ntBASIC3.65□□□□□ -1.83
Cpsf6Q6NVF9 Gm23264-201ENSMUST00000083372 107 ntBASIC3.65□□□□□ -1.83
Cpsf6Q6NVF9 Gm25895-201ENSMUST00000083714 100 ntBASIC3.65□□□□□ -1.83
Cpsf6Q6NVF9 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Cpsf6Q6NVF9 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Cpsf6Q6NVF9 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.64□□□□□ -1.83
Cpsf6Q6NVF9 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Cpsf6Q6NVF9 Gm36951-201ENSMUST00000193840 2687 ntBASIC3.64□□□□□ -1.83
Cpsf6Q6NVF9 Gm23697-201ENSMUST00000103897 110 ntBASIC3.64□□□□□ -1.83
Cpsf6Q6NVF9 Gm24282-201ENSMUST00000104232 66 ntBASIC3.64□□□□□ -1.83
Cpsf6Q6NVF9 Gm23320-201ENSMUST00000104462 127 ntBASIC3.64□□□□□ -1.83
Cpsf6Q6NVF9 Gm14299-201ENSMUST00000117586 397 ntBASIC3.64□□□□□ -1.83
Cpsf6Q6NVF9 Gm13567-201ENSMUST00000118026 247 ntBASIC3.64□□□□□ -1.83
Cpsf6Q6NVF9 Gm13801-201ENSMUST00000120750 160 ntBASIC3.64□□□□□ -1.83
Cpsf6Q6NVF9 Gm22561-201ENSMUST00000157331 84 ntBASIC3.64□□□□□ -1.83
Cpsf6Q6NVF9 Gm26148-201ENSMUST00000157430 68 ntBASIC3.64□□□□□ -1.83
Cpsf6Q6NVF9 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cpsf6Q6NVF9 Gm37479-201ENSMUST00000194169 3841 ntBASIC3.64□□□□□ -1.83
Cpsf6Q6NVF9 Gm43604-201ENSMUST00000199799 705 ntBASIC3.64□□□□□ -1.83
Cpsf6Q6NVF9 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.64□□□□□ -1.83
Cpsf6Q6NVF9 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.64□□□□□ -1.83
Cpsf6Q6NVF9 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.64□□□□□ -1.83
Cpsf6Q6NVF9 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Cpsf6Q6NVF9 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.64□□□□□ -1.83
Cpsf6Q6NVF9 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.64□□□□□ -1.83
Cpsf6Q6NVF9 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.64□□□□□ -1.83
Cpsf6Q6NVF9 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Gm25765-201ENSMUST00000104100 132 ntBASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Gm15180-201ENSMUST00000117745 492 ntBASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Gm15183-201ENSMUST00000118933 348 ntBASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Gm11982-201ENSMUST00000121480 314 ntBASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Gm22320-201ENSMUST00000157149 312 ntBASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Gm22816-201ENSMUST00000157450 117 ntBASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Gm26187-201ENSMUST00000157693 101 ntBASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Gm26482-201ENSMUST00000158015 62 ntBASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Gm20693-201ENSMUST00000177431 211 ntBASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Mir6963-201ENSMUST00000183535 71 ntBASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Gm27718-201ENSMUST00000183721 86 ntBASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Gm28500-201ENSMUST00000190286 151 ntBASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Gm38332-201ENSMUST00000194189 147 ntBASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Gm43602-201ENSMUST00000196772 300 ntBASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Gm44519-201ENSMUST00000206486 122 ntBASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Gm44887-201ENSMUST00000208980 178 ntBASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Gm18015-201ENSMUST00000214879 316 ntBASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Gm35405-201ENSMUST00000218754 400 ntBASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 CT030645.1-201ENSMUST00000224020 231 ntBASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Gm24626-201ENSMUST00000082621 161 ntBASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Gm10172-201ENSMUST00000085929 558 ntBASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Gm2869-201ENSMUST00000124359 2621 ntBASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 113.5 ms