Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.23□□□□□ -1.89
Sp140Q6NSQ5 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Sp140Q6NSQ5 Gm24147-201ENSMUST00000082763 144 ntBASIC3.23□□□□□ -1.89
Sp140Q6NSQ5 Gm24533-201ENSMUST00000083138 196 ntBASIC3.23□□□□□ -1.89
Sp140Q6NSQ5 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
Sp140Q6NSQ5 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Sp140Q6NSQ5 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Sp140Q6NSQ5 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Sp140Q6NSQ5 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Sp140Q6NSQ5 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Sp140Q6NSQ5 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Sp140Q6NSQ5 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Sp140Q6NSQ5 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Sp140Q6NSQ5 Gm14518-201ENSMUST00000117351 542 ntBASIC3.22□□□□□ -1.89
Sp140Q6NSQ5 Gm11253-201ENSMUST00000118486 201 ntBASIC3.22□□□□□ -1.89
Sp140Q6NSQ5 Gm9119-201ENSMUST00000118866 495 ntBASIC3.22□□□□□ -1.89
Sp140Q6NSQ5 Gm12071-201ENSMUST00000121968 469 ntBASIC3.22□□□□□ -1.89
Sp140Q6NSQ5 Gm26020-201ENSMUST00000122729 183 ntBASIC3.22□□□□□ -1.89
Sp140Q6NSQ5 Gm24629-201ENSMUST00000122762 89 ntBASIC3.22□□□□□ -1.89
Sp140Q6NSQ5 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.22□□□□□ -1.89
Sp140Q6NSQ5 Gm22380-201ENSMUST00000157479 95 ntBASIC3.22□□□□□ -1.89
Sp140Q6NSQ5 Gm17100-201ENSMUST00000168963 272 ntBASIC3.22□□□□□ -1.89
Sp140Q6NSQ5 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC3.22□□□□□ -1.89
Sp140Q6NSQ5 Gm43250-201ENSMUST00000196536 273 ntBASIC3.22□□□□□ -1.89
Sp140Q6NSQ5 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.22□□□□□ -1.89
Sp140Q6NSQ5 Gm43583-201ENSMUST00000199235 303 ntBASIC3.22□□□□□ -1.89
Sp140Q6NSQ5 Gm44084-201ENSMUST00000203947 409 ntBASIC3.22□□□□□ -1.89
Sp140Q6NSQ5 Gm44977-201ENSMUST00000205283 420 ntBASIC3.22□□□□□ -1.89
Sp140Q6NSQ5 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Sp140Q6NSQ5 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.21□□□□□ -1.89
Sp140Q6NSQ5 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
Sp140Q6NSQ5 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
Sp140Q6NSQ5 Gm37941-201ENSMUST00000192170 2309 ntBASIC3.21□□□□□ -1.89
Sp140Q6NSQ5 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Sp140Q6NSQ5 Gm25272-201ENSMUST00000104293 128 ntBASIC3.21□□□□□ -1.9
Sp140Q6NSQ5 Mir1198-201ENSMUST00000116995 121 ntBASIC3.21□□□□□ -1.9
Sp140Q6NSQ5 Gm12771-201ENSMUST00000120246 135 ntBASIC3.21□□□□□ -1.9
Sp140Q6NSQ5 Gm6762-201ENSMUST00000121769 289 ntBASIC3.21□□□□□ -1.9
Sp140Q6NSQ5 Gm22957-201ENSMUST00000122511 123 ntBASIC3.21□□□□□ -1.9
Sp140Q6NSQ5 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.21□□□□□ -1.9
Sp140Q6NSQ5 Gm23829-201ENSMUST00000157392 270 ntBASIC3.21□□□□□ -1.9
Sp140Q6NSQ5 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC3.21□□□□□ -1.9
Sp140Q6NSQ5 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC3.21□□□□□ -1.9
Sp140Q6NSQ5 AC164161.1-201ENSMUST00000214076 639 ntBASIC3.21□□□□□ -1.9
Sp140Q6NSQ5 AC125374.2-201ENSMUST00000214278 162 ntBASIC3.21□□□□□ -1.9
Sp140Q6NSQ5 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC3.21□□□□□ -1.9
Sp140Q6NSQ5 AC173482.4-201ENSMUST00000225096 348 ntBASIC3.21□□□□□ -1.9
Sp140Q6NSQ5 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Sp140Q6NSQ5 Gm23850-201ENSMUST00000083830 169 ntBASIC3.21□□□□□ -1.9
Sp140Q6NSQ5 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Sp140Q6NSQ5 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
Sp140Q6NSQ5 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Sp140Q6NSQ5 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Sp140Q6NSQ5 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.2□□□□□ -1.9
Sp140Q6NSQ5 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Sp140Q6NSQ5 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Sp140Q6NSQ5 Gm14593-201ENSMUST00000119948 294 ntBASIC3.2□□□□□ -1.9
Sp140Q6NSQ5 Gm12042-201ENSMUST00000120479 301 ntBASIC3.2□□□□□ -1.9
Sp140Q6NSQ5 Defa-ps8-201ENSMUST00000120972 279 ntBASIC3.2□□□□□ -1.9
Sp140Q6NSQ5 Gm11819-201ENSMUST00000122192 372 ntBASIC3.2□□□□□ -1.9
Sp140Q6NSQ5 Gm26477-201ENSMUST00000122617 323 ntBASIC3.2□□□□□ -1.9
Sp140Q6NSQ5 n-R5s87-201ENSMUST00000122752 116 ntBASIC3.2□□□□□ -1.9
Sp140Q6NSQ5 Gm26275-201ENSMUST00000157101 268 ntBASIC3.2□□□□□ -1.9
Sp140Q6NSQ5 Gm24213-201ENSMUST00000158255 258 ntBASIC3.2□□□□□ -1.9
Sp140Q6NSQ5 Gm26061-201ENSMUST00000175584 108 ntBASIC3.2□□□□□ -1.9
Sp140Q6NSQ5 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC3.2□□□□□ -1.9
Sp140Q6NSQ5 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.2□□□□□ -1.9
Sp140Q6NSQ5 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.2□□□□□ -1.9
Sp140Q6NSQ5 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.2□□□□□ -1.9
Sp140Q6NSQ5 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Sp140Q6NSQ5 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Sp140Q6NSQ5 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
Sp140Q6NSQ5 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.19□□□□□ -1.9
Sp140Q6NSQ5 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.19□□□□□ -1.9
Sp140Q6NSQ5 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Sp140Q6NSQ5 n-R5s67-201ENSMUST00000104336 114 ntBASIC3.19□□□□□ -1.9
Sp140Q6NSQ5 Gm24890-201ENSMUST00000104389 102 ntBASIC3.19□□□□□ -1.9
Sp140Q6NSQ5 Gm15896-201ENSMUST00000118045 440 ntBASIC3.19□□□□□ -1.9
Sp140Q6NSQ5 Gm12686-201ENSMUST00000120546 397 ntBASIC3.19□□□□□ -1.9
Sp140Q6NSQ5 Gm14629-201ENSMUST00000122428 144 ntBASIC3.19□□□□□ -1.9
Sp140Q6NSQ5 Gm25977-201ENSMUST00000158697 85 ntBASIC3.19□□□□□ -1.9
Sp140Q6NSQ5 Gm20450-201ENSMUST00000173652 147 ntBASIC3.19□□□□□ -1.9
Sp140Q6NSQ5 Gm4479-201ENSMUST00000178807 171 ntBASIC3.19□□□□□ -1.9
Sp140Q6NSQ5 Gm27893-201ENSMUST00000184408 194 ntBASIC3.19□□□□□ -1.9
Sp140Q6NSQ5 Gm37361-201ENSMUST00000194345 132 ntBASIC3.19□□□□□ -1.9
Sp140Q6NSQ5 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC3.19□□□□□ -1.9
Sp140Q6NSQ5 Gm44010-201ENSMUST00000204432 331 ntBASIC3.19□□□□□ -1.9
Sp140Q6NSQ5 Gm45879-201ENSMUST00000212521 392 ntBASIC3.19□□□□□ -1.9
Sp140Q6NSQ5 Gm19563-201ENSMUST00000222031 270 ntBASIC3.19□□□□□ -1.9
Sp140Q6NSQ5 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Sp140Q6NSQ5 Gm23517-201ENSMUST00000082830 192 ntBASIC3.19□□□□□ -1.9
Sp140Q6NSQ5 Gm22685-201ENSMUST00000082848 106 ntBASIC3.19□□□□□ -1.9
Sp140Q6NSQ5 n-R5s85-201ENSMUST00000083453 113 ntBASIC3.19□□□□□ -1.9
Sp140Q6NSQ5 Gm26166-201ENSMUST00000083788 107 ntBASIC3.19□□□□□ -1.9
Sp140Q6NSQ5 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Sp140Q6NSQ5 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Sp140Q6NSQ5 Gm7123-201ENSMUST00000117647 213 ntBASIC3.18□□□□□ -1.9
Sp140Q6NSQ5 Gm22026-201ENSMUST00000122735 281 ntBASIC3.18□□□□□ -1.9
Sp140Q6NSQ5 Gm23326-201ENSMUST00000157419 105 ntBASIC3.18□□□□□ -1.9
Sp140Q6NSQ5 Gm23586-201ENSMUST00000157657 123 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 101.8 ms